RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 NMES1Q9C002 83 aa1.68□□□□□ -2.14
SF3B1-205ENST00000424674 A0A0G2JMZ2 1700 aa1.68□□□□□ -2.14
SF3B1-205ENST00000424674 NCOA6Q14686 2063 aaPredicted RBP1.68□□□□□ -2.14
SF3B1-205ENST00000424674 DNAJC13O75165 2243 aa1.67□□□□□ -2.14
SF3B1-205ENST00000424674 EFCAB6Q5THR3 1501 aa1.67□□□□□ -2.14
SF3B1-205ENST00000424674 NESP48681 1621 aa1.67□□□□□ -2.14
SF3B1-205ENST00000424674 FMN2Q9NZ56 1722 aa1.67□□□□□ -2.14
SF3B1-205ENST00000424674 NDUFA4O00483 81 aa1.67□□□□□ -2.14
SF3B1-205ENST00000424674 PRH1P02810 166 aa1.67□□□□□ -2.14
SF3B1-205ENST00000424674 PCOTHQ58A44 107 aa1.67□□□□□ -2.14
SF3B1-205ENST00000424674 NCBP2-AS2Q69YL0 99 aa1.67□□□□□ -2.14
SF3B1-205ENST00000424674 SSC5DA1L4H1 1573 aa1.67□□□□□ -2.14
SF3B1-205ENST00000424674 LY6G6CO95867 125 aa1.66□□□□□ -2.14
SF3B1-205ENST00000424674 CMC2Q9NRP2 79 aa1.66□□□□□ -2.14
SF3B1-205ENST00000424674 ERCC6L2Q5T890 1561 aa1.66□□□□□ -2.14
SF3B1-205ENST00000424674 SDK1Q7Z5N4 2213 aa1.66□□□□□ -2.14
SF3B1-205ENST00000424674 K7EMI3 77 aa1.65□□□□□ -2.15
SF3B1-205ENST00000424674 FXYD6P3P58550 94 aa1.65□□□□□ -2.15
SF3B1-205ENST00000424674 DEFB114Q30KQ6 69 aa1.65□□□□□ -2.15
SF3B1-205ENST00000424674 KMT2BQ9UMN6 2715 aaPredicted RBP1.65□□□□□ -2.15
SF3B1-205ENST00000424674 POLR1AO95602 1720 aaPredicted RBP1.64□□□□□ -2.15
SF3B1-205ENST00000424674 CPSF4LA6NMK7 179 aaKnown RBP1.64□□□□□ -2.15
SF3B1-205ENST00000424674 UBE2DNLQ8IWF7 75 aa1.64□□□□□ -2.15
SF3B1-205ENST00000424674 ABCA5Q8WWZ7 1642 aa1.64□□□□□ -2.15
SF3B1-205ENST00000424674 C3P01024 1663 aa1.64□□□□□ -2.15
SF3B1-205ENST00000424674 LRRC37AA6NMS7 1700 aa1.63□□□□□ -2.15
SF3B1-205ENST00000424674 NRAPQ86VF7 1730 aa1.63□□□□□ -2.15
SF3B1-205ENST00000424674 ICE1Q9Y2F5 2266 aa1.63□□□□□ -2.15
SF3B1-205ENST00000424674 MYO7AQ13402 2215 aa1.63□□□□□ -2.15
SF3B1-205ENST00000424674 LY75O60449 1722 aa1.63□□□□□ -2.15
SF3B1-205ENST00000424674 SLIT1O75093 1534 aa1.62□□□□□ -2.15
SF3B1-205ENST00000424674 SPTY2D1-AS1A0A0U1RR47 76 aa1.62□□□□□ -2.15
SF3B1-205ENST00000424674 PRB1P04280 392 aa1.62□□□□□ -2.15
SF3B1-205ENST00000424674 DEFB119Q8N690 84 aa1.62□□□□□ -2.15
SF3B1-205ENST00000424674 KCNQ1DNQ9H478 68 aa1.62□□□□□ -2.15
SF3B1-205ENST00000424674 KIAA0586Q9BVV6 1533 aa1.61□□□□□ -2.15
SF3B1-205ENST00000424674 INTS1Q8N201 2190 aaKnown RBP1.61□□□□□ -2.15
SF3B1-205ENST00000424674 MRPL33O75394 65 aaKnown RBP1.61□□□□□ -2.15
SF3B1-205ENST00000424674 PLNP26678 52 aa1.61□□□□□ -2.15
SF3B1-205ENST00000424674 TJP1Q07157 1748 aa1.6□□□□□ -2.15
SF3B1-205ENST00000424674 DOT1LQ8TEK3 1739 aa1.6□□□□□ -2.15
SF3B1-205ENST00000424674 IQGAP2Q13576 1575 aa1.6□□□□□ -2.15
SF3B1-205ENST00000424674 ETDCA0A1B0GVM5 59 aa1.6□□□□□ -2.15
SF3B1-205ENST00000424674 ANGP03950 147 aaKnown RBP1.6□□□□□ -2.15
SF3B1-205ENST00000424674 TULP4Q9NRJ4 1543 aa1.6□□□□□ -2.15
SF3B1-205ENST00000424674 QSER1Q2KHR3 1735 aa1.6□□□□□ -2.15
SF3B1-205ENST00000424674 ABCC8Q09428 1581 aa1.59□□□□□ -2.15
SF3B1-205ENST00000424674 ANKRD36CQ5JPF3 1778 aa1.59□□□□□ -2.15
SF3B1-205ENST00000424674 KRTAP12-1P59990 96 aa1.59□□□□□ -2.15
SF3B1-205ENST00000424674 KRTAP10-10P60014 251 aa1.59□□□□□ -2.15
SF3B1-205ENST00000424674 ABRACLQ9P1F3 81 aa1.59□□□□□ -2.15
SF3B1-205ENST00000424674 ZFHX3Q15911 3703 aa1.59□□□□□ -2.16
SF3B1-205ENST00000424674 MED13LQ71F56 2210 aa1.59□□□□□ -2.16
SF3B1-205ENST00000424674 AGLP35573 1532 aa1.58□□□□□ -2.16
SF3B1-205ENST00000424674 IGIPA6NJ69 53 aa1.58□□□□□ -2.16
SF3B1-205ENST00000424674 K7EIL1 84 aa1.58□□□□□ -2.16
SF3B1-205ENST00000424674 M0R1W7 72 aa1.58□□□□□ -2.16
SF3B1-205ENST00000424674 USMG5Q96IX5 58 aa1.58□□□□□ -2.16
SF3B1-205ENST00000424674 CRIPTQ9P021 101 aa1.58□□□□□ -2.16
SF3B1-205ENST00000424674 PLXNB2O15031 1838 aa1.58□□□□□ -2.16
SF3B1-205ENST00000424674 NWD1Q149M9 1564 aa1.58□□□□□ -2.16
SF3B1-205ENST00000424674 DEFB131BA0A096LNP1 70 aa1.57□□□□□ -2.16
SF3B1-205ENST00000424674 SMIM27A0A1W2PRY6 76 aa1.57□□□□□ -2.16
SF3B1-205ENST00000424674 I3L3M4 83 aa1.57□□□□□ -2.16
SF3B1-205ENST00000424674 ARL14EPLP0DKL9 152 aa1.57□□□□□ -2.16
SF3B1-205ENST00000424674 NRXN3Q9Y4C0 1643 aa1.57□□□□□ -2.16
SF3B1-205ENST00000424674 H0YGX0 51 aa1.55□□□□□ -2.16
SF3B1-205ENST00000424674 PIGYQ3MUY2 71 aa1.55□□□□□ -2.16
SF3B1-205ENST00000424674 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
SF3B1-205ENST00000424674 TP53AIP1Q9HCN2 124 aa1.55□□□□□ -2.16
SF3B1-205ENST00000424674 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
SF3B1-205ENST00000424674 LINC01546A6NGU7 62 aa1.53□□□□□ -2.16
SF3B1-205ENST00000424674 F5P12259 2224 aa1.53□□□□□ -2.16
SF3B1-205ENST00000424674 COX6B1P14854 86 aa1.53□□□□□ -2.16
SF3B1-205ENST00000424674 CACNA1CQ13936 2221 aa1.53□□□□□ -2.16
SF3B1-205ENST00000424674 LYNX1P0DP58 116 aa1.52□□□□□ -2.17
SF3B1-205ENST00000424674 COX6B2Q6YFQ2 88 aa1.52□□□□□ -2.17
SF3B1-205ENST00000424674 DEFB123Q8N688 67 aa1.52□□□□□ -2.17
SF3B1-205ENST00000424674 CNFNQ9BYD5 112 aa1.52□□□□□ -2.17
SF3B1-205ENST00000424674 FAM208AQ9UK61 1670 aaKnown RBP1.51□□□□□ -2.17
SF3B1-205ENST00000424674 I3L2K1 104 aa1.51□□□□□ -2.17
SF3B1-205ENST00000424674 CCL22O00626 93 aa1.51□□□□□ -2.17
SF3B1-205ENST00000424674 DDX60LQ5H9U9 1706 aaKnown RBP1.51□□□□□ -2.17
SF3B1-205ENST00000424674 ABCA1O95477 2261 aa1.51□□□□□ -2.17
SF3B1-205ENST00000424674 K7EQZ3 153 aa1.5□□□□□ -2.17
SF3B1-205ENST00000424674 CRIP1P50238 77 aa1.5□□□□□ -2.17
SF3B1-205ENST00000424674 KRTAP13-1Q8IUC0 172 aa1.5□□□□□ -2.17
SF3B1-205ENST00000424674 CACNA1BQ00975 2339 aa1.49□□□□□ -2.17
SF3B1-205ENST00000424674 KRTAP6-3Q3LI67 103 aa1.49□□□□□ -2.17
SF3B1-205ENST00000424674 SPINK9Q5DT21 86 aa1.49□□□□□ -2.17
SF3B1-205ENST00000424674 MRPL34Q9BQ48 92 aaKnown RBP1.49□□□□□ -2.17
SF3B1-205ENST00000424674 HMCN1Q96RW7 5635 aa1.49□□□□□ -2.17
SF3B1-205ENST00000424674 TRPM2O94759 1503 aa1.49□□□□□ -2.17
SF3B1-205ENST00000424674 ASCC3Q8N3C0 2202 aaKnown RBP1.48□□□□□ -2.17
SF3B1-205ENST00000424674 J3QKU1 62 aa1.48□□□□□ -2.17
SF3B1-205ENST00000424674 CDKN2A-AS1Q9UH64 79 aa1.48□□□□□ -2.17
SF3B1-205ENST00000424674 TECTAO75443 2155 aa1.47□□□□□ -2.17
SF3B1-205ENST00000424674 CACNA1GO43497 2377 aa1.47□□□□□ -2.17
SF3B1-205ENST00000424674 TRIOBPQ9H2D6 2365 aa1.47□□□□□ -2.17
SF3B1-205ENST00000424674 NFAT5O94916 1531 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms