RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 CHCHD10Q8WYQ3 142 aaPredicted RBP5.52□□□□□ -1.53
COL12A1-204ENST00000419671 COX7CP15954 63 aa5.51□□□□□ -1.53
COL12A1-204ENST00000419671 ESRGQ1W209 222 aa5.51□□□□□ -1.53
COL12A1-204ENST00000419671 SOSTDC1Q6X4U4 206 aa5.51□□□□□ -1.53
COL12A1-204ENST00000419671 C15orf53Q8NAA6 179 aa5.51□□□□□ -1.53
COL12A1-204ENST00000419671 KLK12Q9UKR0 248 aa5.51□□□□□ -1.53
COL12A1-204ENST00000419671 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.5□□□□□ -1.53
COL12A1-204ENST00000419671 IGHV3-33P01772 117 aa5.5□□□□□ -1.53
COL12A1-204ENST00000419671 SFTA2Q6UW10 78 aa5.5□□□□□ -1.53
COL12A1-204ENST00000419671 ENHOQ6UWT2 76 aa5.5□□□□□ -1.53
COL12A1-204ENST00000419671 LINC00308Q8TCZ7 52 aa5.5□□□□□ -1.53
COL12A1-204ENST00000419671 MGAM2Q2M2H8 2515 aa5.5□□□□□ -1.53
COL12A1-204ENST00000419671 A0A0U1RQV1 116 aa5.5□□□□□ -1.53
COL12A1-204ENST00000419671 COX7A2LO14548 114 aa5.5□□□□□ -1.53
COL12A1-204ENST00000419671 IMUPQ9GZP8 106 aa5.5□□□□□ -1.53
COL12A1-204ENST00000419671 EPM2AB3EWF7 344 aa5.49□□□□□ -1.53
COL12A1-204ENST00000419671 KIAA0087Q14695 138 aa5.49□□□□□ -1.53
COL12A1-204ENST00000419671 Q8IZM0 81 aa5.49□□□□□ -1.53
COL12A1-204ENST00000419671 RPL13AP40429 203 aaKnown RBP5.48□□□□□ -1.53
COL12A1-204ENST00000419671 DSCR8Q96T75 97 aa5.48□□□□□ -1.53
COL12A1-204ENST00000419671 TRAV10A0A0B4J240 114 aa5.48□□□□□ -1.53
COL12A1-204ENST00000419671 LOC107984156A0A0G2JMH3 177 aa5.48□□□□□ -1.53
COL12A1-204ENST00000419671 H7C2G1 150 aa5.48□□□□□ -1.53
COL12A1-204ENST00000419671 C2orf82Q6UX34 121 aa5.48□□□□□ -1.53
COL12A1-204ENST00000419671 ARL17AQ8IVW1 177 aa5.48□□□□□ -1.53
COL12A1-204ENST00000419671 MIR7-3HGQ8N6C7 128 aa5.48□□□□□ -1.53
COL12A1-204ENST00000419671 DNAH9Q9NYC9 4486 aa5.47□□□□□ -1.53
COL12A1-204ENST00000419671 IBA57-AS1B1ANH7 110 aa5.47□□□□□ -1.53
COL12A1-204ENST00000419671 UBE2WQ96B02 151 aa5.47□□□□□ -1.53
COL12A1-204ENST00000419671 TCL1BO95988 128 aa5.46□□□□□ -1.54
COL12A1-204ENST00000419671 LINC00158P58513 81 aa5.46□□□□□ -1.54
COL12A1-204ENST00000419671 COPS9Q8WXC6 57 aa5.46□□□□□ -1.54
COL12A1-204ENST00000419671 TRAV8-4A0A0B4J246 113 aa5.45□□□□□ -1.54
COL12A1-204ENST00000419671 TRIAP1O43715 76 aa5.45□□□□□ -1.54
COL12A1-204ENST00000419671 CRPP02741 224 aa5.45□□□□□ -1.54
COL12A1-204ENST00000419671 SCGB1C2P0DMR2 95 aa5.45□□□□□ -1.54
COL12A1-204ENST00000419671 LINC01556Q5JQF7 62 aa5.45□□□□□ -1.54
COL12A1-204ENST00000419671 KRTAP26-1Q6PEX3 210 aa5.45□□□□□ -1.54
COL12A1-204ENST00000419671 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
COL12A1-204ENST00000419671 LYSTQ99698 3801 aa5.45□□□□□ -1.54
COL12A1-204ENST00000419671 TRBV30A0A0K0K1B3 111 aa5.44□□□□□ -1.54
COL12A1-204ENST00000419671 hADV29S1A0JD25 119 aa5.44□□□□□ -1.54
COL12A1-204ENST00000419671 CXCL5P42830 114 aa5.44□□□□□ -1.54
COL12A1-204ENST00000419671 PSMB2P49721 201 aa5.44□□□□□ -1.54
COL12A1-204ENST00000419671 Q1RN00 199 aa5.44□□□□□ -1.54
COL12A1-204ENST00000419671 IGKV2-28A0A075B6P5 120 aa5.44□□□□□ -1.54
COL12A1-204ENST00000419671 IGKV2D-28P01615 120 aa5.44□□□□□ -1.54
COL12A1-204ENST00000419671 DNAH10OSP0CZ25 163 aa5.44□□□□□ -1.54
COL12A1-204ENST00000419671 CCL18P55774 89 aa5.44□□□□□ -1.54
COL12A1-204ENST00000419671 MRPL55Q7Z7F7 128 aaKnown RBP5.44□□□□□ -1.54
COL12A1-204ENST00000419671 C6orf223Q8N319 242 aa5.44□□□□□ -1.54
COL12A1-204ENST00000419671 LINC00588Q9Y4M8 146 aa5.44□□□□□ -1.54
COL12A1-204ENST00000419671 VPREB1P12018 145 aa5.43□□□□□ -1.54
COL12A1-204ENST00000419671 SPAG11BQ08648 103 aa5.43□□□□□ -1.54
COL12A1-204ENST00000419671 C9orf116Q5BN46 136 aaPredicted RBP5.43□□□□□ -1.54
COL12A1-204ENST00000419671 C10orf25Q5T742 122 aa5.43□□□□□ -1.54
COL12A1-204ENST00000419671 Q6ZRU5 148 aa5.43□□□□□ -1.54
COL12A1-204ENST00000419671 B9D2Q9BPU9 175 aa5.43□□□□□ -1.54
COL12A1-204ENST00000419671 SND1-IT1Q9HBX3 110 aa5.43□□□□□ -1.54
COL12A1-204ENST00000419671 FAM240AA0A1B0GVK7 77 aa5.42□□□□□ -1.54
COL12A1-204ENST00000419671 NDUFC2-KCTD14E9PQ53 114 aa5.42□□□□□ -1.54
COL12A1-204ENST00000419671 DNHD1Q96M86 4753 aa5.42□□□□□ -1.54
COL12A1-204ENST00000419671 COX17Q14061 63 aa5.42□□□□□ -1.54
COL12A1-204ENST00000419671 UNQ6190/PRO20217Q6UXQ8 127 aa5.42□□□□□ -1.54
COL12A1-204ENST00000419671 LINC00337Q8N6G1 96 aa5.42□□□□□ -1.54
COL12A1-204ENST00000419671 LINC01600Q96MT4 127 aa5.42□□□□□ -1.54
COL12A1-204ENST00000419671 CSMD3Q7Z407 3707 aa5.42□□□□□ -1.54
COL12A1-204ENST00000419671 DNAH1Q9P2D7 4330 aa5.41□□□□□ -1.54
COL12A1-204ENST00000419671 NTN5Q8WTR8 489 aaPredicted RBP5.41□□□□□ -1.54
COL12A1-204ENST00000419671 CYSTM1Q9H1C7 97 aa5.41□□□□□ -1.54
COL12A1-204ENST00000419671 SERP1Q9Y6X1 66 aa5.41□□□□□ -1.54
COL12A1-204ENST00000419671 USP17L23D6RBM5 183 aa5.4□□□□□ -1.54
COL12A1-204ENST00000419671 C15orf56Q8N910 161 aa5.4□□□□□ -1.54
COL12A1-204ENST00000419671 PRKDCP78527 4128 aaKnown RBP5.4□□□□□ -1.54
COL12A1-204ENST00000419671 STAB2Q8WWQ8 2551 aa5.4□□□□□ -1.55
COL12A1-204ENST00000419671 SMIM26A0A096LP01 95 aa5.4□□□□□ -1.55
COL12A1-204ENST00000419671 H3BT86 120 aa5.4□□□□□ -1.55
COL12A1-204ENST00000419671 PRR15Q8IV56 129 aa5.4□□□□□ -1.55
COL12A1-204ENST00000419671 UPK3BQ9BT76 320 aa5.4□□□□□ -1.55
COL12A1-204ENST00000419671 GVQW2A0A096LPI5 108 aaPredicted RBP5.39□□□□□ -1.55
COL12A1-204ENST00000419671 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
COL12A1-204ENST00000419671 ATOX1O00244 68 aa5.39□□□□□ -1.55
COL12A1-204ENST00000419671 ATXN8Q156A1 80 aa5.39□□□□□ -1.55
COL12A1-204ENST00000419671 HIGD2BQ4VC39 106 aa5.39□□□□□ -1.55
COL12A1-204ENST00000419671 Q8NDZ9 215 aa5.39□□□□□ -1.55
COL12A1-204ENST00000419671 CLEC2BQ92478 149 aa5.39□□□□□ -1.55
COL12A1-204ENST00000419671 C6orf48Q9UBA6 75 aa5.39□□□□□ -1.55
COL12A1-204ENST00000419671 IGKV2D-24A0A075B6R9 120 aa5.38□□□□□ -1.55
COL12A1-204ENST00000419671 COX6CP09669 75 aa5.38□□□□□ -1.55
COL12A1-204ENST00000419671 SERTAD4-AS1Q5TG53 156 aa5.38□□□□□ -1.55
COL12A1-204ENST00000419671 Q9HAA7 133 aa5.38□□□□□ -1.55
COL12A1-204ENST00000419671 HIST1H4AP62805 103 aaKnown RBP5.38□□□□□ -1.55
COL12A1-204ENST00000419671 PRR3P79522 188 aaKnown RBP5.38□□□□□ -1.55
COL12A1-204ENST00000419671 DNAH7Q8WXX0 4024 aa5.37□□□□□ -1.55
COL12A1-204ENST00000419671 LST1O00453 97 aa5.37□□□□□ -1.55
COL12A1-204ENST00000419671 SLC25A20O43772 301 aa5.37□□□□□ -1.55
COL12A1-204ENST00000419671 RPL28P46779 137 aaKnown RBP5.37□□□□□ -1.55
COL12A1-204ENST00000419671 FP248Q71RG6 208 aaPredicted RBP5.37□□□□□ -1.55
COL12A1-204ENST00000419671 PRR26Q8N8Z3 221 aa5.37□□□□□ -1.55
COL12A1-204ENST00000419671 SMIM11BQ8TCY0 68 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms