RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 ETDCA0A1B0GVM5 59 aa1.58□□□□□ -2.16
CTDSPL-203ENST00000416688 I3L3M4 83 aa1.58□□□□□ -2.16
CTDSPL-203ENST00000416688 LY6G6CO95867 125 aa1.58□□□□□ -2.16
CTDSPL-203ENST00000416688 ARL14EPLP0DKL9 152 aa1.58□□□□□ -2.16
CTDSPL-203ENST00000416688 UNQ6190/PRO20217Q6UXQ8 127 aa1.58□□□□□ -2.16
CTDSPL-203ENST00000416688 SSBP3-AS1Q7Z2R9 100 aa1.58□□□□□ -2.16
CTDSPL-203ENST00000416688 KCNQ1DNQ9H478 68 aa1.58□□□□□ -2.16
CTDSPL-203ENST00000416688 LRRC37AA6NMS7 1700 aa1.57□□□□□ -2.16
CTDSPL-203ENST00000416688 DDX60LQ5H9U9 1706 aaKnown RBP1.57□□□□□ -2.16
CTDSPL-203ENST00000416688 IGIPA6NJ69 53 aa1.57□□□□□ -2.16
CTDSPL-203ENST00000416688 H0YGX0 51 aa1.57□□□□□ -2.16
CTDSPL-203ENST00000416688 SPTY2D1-AS1A0A0U1RR47 76 aa1.56□□□□□ -2.16
CTDSPL-203ENST00000416688 LINC01546A6NGU7 62 aa1.56□□□□□ -2.16
CTDSPL-203ENST00000416688 CPSF4LA6NMK7 179 aaKnown RBP1.56□□□□□ -2.16
CTDSPL-203ENST00000416688 G3V318 75 aa1.56□□□□□ -2.16
CTDSPL-203ENST00000416688 COX6B1P14854 86 aa1.56□□□□□ -2.16
CTDSPL-203ENST00000416688 KRTAP12-2P59991 146 aa1.56□□□□□ -2.16
CTDSPL-203ENST00000416688 SNRPGP62308 76 aaKnown RBP1.56□□□□□ -2.16
CTDSPL-203ENST00000416688 MED13LQ71F56 2210 aa1.56□□□□□ -2.16
CTDSPL-203ENST00000416688 DEPDC5O75140 1603 aa1.55□□□□□ -2.16
CTDSPL-203ENST00000416688 KRTAP1-5Q9BYS1 174 aa1.55□□□□□ -2.16
CTDSPL-203ENST00000416688 KRTAP2-2Q9BYT5 123 aa1.55□□□□□ -2.16
CTDSPL-203ENST00000416688 SAMD9LQ8IVG5 1584 aa1.55□□□□□ -2.16
CTDSPL-203ENST00000416688 QSER1Q2KHR3 1735 aa1.54□□□□□ -2.16
CTDSPL-203ENST00000416688 DEFB131BA0A096LNP1 70 aa1.54□□□□□ -2.16
CTDSPL-203ENST00000416688 ANGP03950 147 aaKnown RBP1.54□□□□□ -2.16
CTDSPL-203ENST00000416688 F5P12259 2224 aa1.53□□□□□ -2.16
CTDSPL-203ENST00000416688 TNCP24821 2201 aa1.53□□□□□ -2.16
CTDSPL-203ENST00000416688 FXYD6P3P58550 94 aa1.53□□□□□ -2.16
CTDSPL-203ENST00000416688 KRTAP10-8P60410 259 aa1.53□□□□□ -2.16
CTDSPL-203ENST00000416688 RPL37P61927 97 aaKnown RBP1.53□□□□□ -2.16
CTDSPL-203ENST00000416688 UBE2DNLQ8IWF7 75 aa1.53□□□□□ -2.16
CTDSPL-203ENST00000416688 ANKRD17O75179 2603 aaKnown RBP1.53□□□□□ -2.17
CTDSPL-203ENST00000416688 ICE1Q9Y2F5 2266 aa1.52□□□□□ -2.17
CTDSPL-203ENST00000416688 CACNA1CQ13936 2221 aa1.52□□□□□ -2.17
CTDSPL-203ENST00000416688 MROH2BQ7Z745 1585 aa1.52□□□□□ -2.17
CTDSPL-203ENST00000416688 TIMM8BQ9Y5J9 83 aaPredicted RBP1.52□□□□□ -2.17
CTDSPL-203ENST00000416688 E9PCH4 1651 aa1.51□□□□□ -2.17
CTDSPL-203ENST00000416688 SSC5DA1L4H1 1573 aa1.51□□□□□ -2.17
CTDSPL-203ENST00000416688 ABCA1O95477 2261 aa1.51□□□□□ -2.17
CTDSPL-203ENST00000416688 DDX60Q8IY21 1712 aaKnown RBP1.51□□□□□ -2.17
CTDSPL-203ENST00000416688 BPTFQ12830 3046 aa1.5□□□□□ -2.17
CTDSPL-203ENST00000416688 SPINK4O60575 86 aa1.5□□□□□ -2.17
CTDSPL-203ENST00000416688 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
CTDSPL-203ENST00000416688 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
CTDSPL-203ENST00000416688 USMG5Q96IX5 58 aa1.5□□□□□ -2.17
CTDSPL-203ENST00000416688 CRIPTQ9P021 101 aa1.5□□□□□ -2.17
CTDSPL-203ENST00000416688 KIF21BO75037 1637 aa1.5□□□□□ -2.17
CTDSPL-203ENST00000416688 PLXNB2O15031 1838 aa1.5□□□□□ -2.17
CTDSPL-203ENST00000416688 IQGAP1P46940 1657 aa1.49□□□□□ -2.17
CTDSPL-203ENST00000416688 NDUFA3O95167 84 aa1.49□□□□□ -2.17
CTDSPL-203ENST00000416688 KRTAP10-6P60371 365 aaPredicted RBP1.49□□□□□ -2.17
CTDSPL-203ENST00000416688 KRTAP10-7P60409 375 aaPredicted RBP1.49□□□□□ -2.17
CTDSPL-203ENST00000416688 DEFB103AP81534 67 aa1.49□□□□□ -2.17
CTDSPL-203ENST00000416688 KRTAP13-4Q3LI77 160 aa1.49□□□□□ -2.17
CTDSPL-203ENST00000416688 TMEM167BQ9NRX6 74 aa1.49□□□□□ -2.17
CTDSPL-203ENST00000416688 ASCC3Q8N3C0 2202 aaKnown RBP1.49□□□□□ -2.17
CTDSPL-203ENST00000416688 CACNA1GO43497 2377 aa1.49□□□□□ -2.17
CTDSPL-203ENST00000416688 COL4A4P53420 1690 aaPredicted RBP1.48□□□□□ -2.17
CTDSPL-203ENST00000416688 BRD3OSQ6XYD6 125 aa1.48□□□□□ -2.17
CTDSPL-203ENST00000416688 COX6B2Q6YFQ2 88 aa1.48□□□□□ -2.17
CTDSPL-203ENST00000416688 C4AP0C0L4 1744 aa1.47□□□□□ -2.17
CTDSPL-203ENST00000416688 PRB2P02812 416 aaPredicted RBP1.47□□□□□ -2.17
CTDSPL-203ENST00000416688 PIGYQ3MUY2 71 aa1.47□□□□□ -2.17
CTDSPL-203ENST00000416688 LCE1FQ5T754 118 aa1.47□□□□□ -2.17
CTDSPL-203ENST00000416688 TOGARAM1Q9Y4F4 1720 aa1.46□□□□□ -2.18
CTDSPL-203ENST00000416688 LINC00158P58513 81 aa1.46□□□□□ -2.18
CTDSPL-203ENST00000416688 SPRR5A0A1B0GTR4 108 aa1.45□□□□□ -2.18
CTDSPL-203ENST00000416688 CCL22O00626 93 aa1.45□□□□□ -2.18
CTDSPL-203ENST00000416688 PRB1P04280 392 aa1.45□□□□□ -2.18
CTDSPL-203ENST00000416688 Q8IZM0 81 aa1.45□□□□□ -2.18
CTDSPL-203ENST00000416688 DUOX1Q9NRD9 1551 aa1.45□□□□□ -2.18
CTDSPL-203ENST00000416688 LMO7Q8WWI1 1683 aa1.45□□□□□ -2.18
CTDSPL-203ENST00000416688 URB1O60287 2271 aaKnown RBP1.45□□□□□ -2.18
CTDSPL-203ENST00000416688 KNTC1P50748 2209 aa1.44□□□□□ -2.18
CTDSPL-203ENST00000416688 K7EQZ3 153 aa1.44□□□□□ -2.18
CTDSPL-203ENST00000416688 CRIP1P50238 77 aa1.44□□□□□ -2.18
CTDSPL-203ENST00000416688 TP53AIP1Q9HCN2 124 aa1.44□□□□□ -2.18
CTDSPL-203ENST00000416688 CDKN2A-AS1Q9UH64 79 aa1.44□□□□□ -2.18
CTDSPL-203ENST00000416688 ASXL3Q9C0F0 2248 aa1.44□□□□□ -2.18
CTDSPL-203ENST00000416688 AHCTF1Q8WYP5 2266 aa1.43□□□□□ -2.18
CTDSPL-203ENST00000416688 CADP27708 2225 aa1.43□□□□□ -2.18
CTDSPL-203ENST00000416688 GOLGA4Q13439 2230 aaKnown RBP1.43□□□□□ -2.18
CTDSPL-203ENST00000416688 DEFB123Q8N688 67 aa1.43□□□□□ -2.18
CTDSPL-203ENST00000416688 DEFB119Q8N690 84 aa1.43□□□□□ -2.18
CTDSPL-203ENST00000416688 BAHCC1Q9P281 2608 aa1.43□□□□□ -2.18
CTDSPL-203ENST00000416688 TNRC6CQ9HCJ0 1690 aaKnown RBP1.42□□□□□ -2.18
CTDSPL-203ENST00000416688 LYNX1G3V0Z9 82 aa1.42□□□□□ -2.18
CTDSPL-203ENST00000416688 KRTAP10-1P60331 282 aa1.42□□□□□ -2.18
CTDSPL-203ENST00000416688 PCOTHQ58A44 107 aa1.42□□□□□ -2.18
CTDSPL-203ENST00000416688 LINC00308Q8TCZ7 52 aa1.42□□□□□ -2.18
CTDSPL-203ENST00000416688 MRPL34Q9BQ48 92 aaKnown RBP1.42□□□□□ -2.18
CTDSPL-203ENST00000416688 SMIM2Q9BVW6 85 aa1.42□□□□□ -2.18
CTDSPL-203ENST00000416688 TECTAO75443 2155 aa1.42□□□□□ -2.18
CTDSPL-203ENST00000416688 GCC2Q8IWJ2 1684 aa1.42□□□□□ -2.18
CTDSPL-203ENST00000416688 CACNA1BQ00975 2339 aa1.41□□□□□ -2.18
CTDSPL-203ENST00000416688 C4BP0C0L5 1744 aa1.41□□□□□ -2.18
CTDSPL-203ENST00000416688 K7EIL1 84 aa1.41□□□□□ -2.18
CTDSPL-203ENST00000416688 LYNX1P0DP58 116 aa1.41□□□□□ -2.18
CTDSPL-203ENST00000416688 LCE1EQ5T753 118 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms