RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 SMIM11BQ8TCY0 68 aa14.29□□□□□ -0.12
AP1S3-205ENST00000415298 MDFIQ99750 246 aa14.29□□□□□ -0.12
AP1S3-205ENST00000415298 NREPQ16612 68 aa14.29□□□□□ -0.12
AP1S3-205ENST00000415298 K7EMT4 169 aa14.28□□□□□ -0.12
AP1S3-205ENST00000415298 SORL1Q92673 2214 aa14.28□□□□□ -0.12
AP1S3-205ENST00000415298 C8orf87E5RJ46 101 aa14.28□□□□□ -0.12
AP1S3-205ENST00000415298 IGHV1OR15-1A0A075B7D0 117 aa14.27□□□□□ -0.13
AP1S3-205ENST00000415298 PSPHP1O15172 72 aa14.27□□□□□ -0.13
AP1S3-205ENST00000415298 SLPIP03973 132 aa14.27□□□□□ -0.13
AP1S3-205ENST00000415298 Q8N3U1 123 aa14.26□□□□□ -0.13
AP1S3-205ENST00000415298 TMEM256-PLSCR3K7ERE1 68 aa14.26□□□□□ -0.13
AP1S3-205ENST00000415298 RNASE13Q5GAN3 156 aaKnown RBP14.26□□□□□ -0.13
AP1S3-205ENST00000415298 LINC00337Q8N6G1 96 aa14.26□□□□□ -0.13
AP1S3-205ENST00000415298 CDKN2A-AS1Q9UH64 79 aa14.26□□□□□ -0.13
AP1S3-205ENST00000415298 RPL36AP83881 106 aaKnown RBP14.24□□□□□ -0.13
AP1S3-205ENST00000415298 RPL36ALQ969Q0 106 aaKnown RBP14.24□□□□□ -0.13
AP1S3-205ENST00000415298 FAM74A4Q5TZK3 123 aa14.23□□□□□ -0.13
AP1S3-205ENST00000415298 IGLV5-45A0A087WSX0 123 aa14.23□□□□□ -0.13
AP1S3-205ENST00000415298 TRAV22A0A0B4J277 110 aa14.23□□□□□ -0.13
AP1S3-205ENST00000415298 IGLV5-39A0A0G2JS06 123 aa14.22□□□□□ -0.13
AP1S3-205ENST00000415298 ZNF73O43830 326 aaPredicted RBP14.22□□□□□ -0.13
AP1S3-205ENST00000415298 CXCL6P80162 114 aa14.22□□□□□ -0.13
AP1S3-205ENST00000415298 PKD1L1Q8TDX9 2849 aa14.22□□□□□ -0.13
AP1S3-205ENST00000415298 SYCNQ0VAF6 134 aa14.22□□□□□ -0.13
AP1S3-205ENST00000415298 HAMPP81172 84 aa14.21□□□□□ -0.13
AP1S3-205ENST00000415298 Q6ZTI0 123 aa14.21□□□□□ -0.13
AP1S3-205ENST00000415298 PHF5AQ7RTV0 110 aaKnown RBP14.2□□□□□ -0.14
AP1S3-205ENST00000415298 IGKV2-28A0A075B6P5 120 aa14.2□□□□□ -0.14
AP1S3-205ENST00000415298 IGKV2D-28P01615 120 aa14.2□□□□□ -0.14
AP1S3-205ENST00000415298 UBE2L6O14933 153 aa14.18□□□□□ -0.14
AP1S3-205ENST00000415298 LRCOL1A6NCL2 159 aa14.18□□□□□ -0.14
AP1S3-205ENST00000415298 DEFB114Q30KQ6 69 aa14.18□□□□□ -0.14
AP1S3-205ENST00000415298 LINC00167Q96N53 147 aa14.17□□□□□ -0.14
AP1S3-205ENST00000415298 IGHV3-38A0A0C4DH36 116 aa14.17□□□□□ -0.14
AP1S3-205ENST00000415298 A8MU10 97 aa14.16□□□□□ -0.14
AP1S3-205ENST00000415298 DEFB1P60022 68 aa14.15□□□□□ -0.14
AP1S3-205ENST00000415298 SND1-IT1Q9HBX3 110 aa14.15□□□□□ -0.14
AP1S3-205ENST00000415298 BPY2O14599 106 aa14.13□□□□□ -0.15
AP1S3-205ENST00000415298 ANK2Q01484 3957 aa14.12□□□□□ -0.15
AP1S3-205ENST00000415298 TRBV10-1A0A0K0K1A3 114 aa14.11□□□□□ -0.15
AP1S3-205ENST00000415298 CD164L2Q6UWJ8 174 aa14.11□□□□□ -0.15
AP1S3-205ENST00000415298 LINC00269Q8N2A0 174 aa14.11□□□□□ -0.15
AP1S3-205ENST00000415298 C1orf64Q8NEQ6 169 aa14.11□□□□□ -0.15
AP1S3-205ENST00000415298 IGLV1-51P01701 117 aa14.11□□□□□ -0.15
AP1S3-205ENST00000415298 Q6ZQT0 140 aa14.1□□□□□ -0.15
AP1S3-205ENST00000415298 CMYA5Q8N3K9 4069 aa14.1□□□□□ -0.15
AP1S3-205ENST00000415298 A8MUN3 132 aa14.09□□□□□ -0.15
AP1S3-205ENST00000415298 K7EQG2 157 aa14.09□□□□□ -0.15
AP1S3-205ENST00000415298 UBE2AP49459 152 aa14.09□□□□□ -0.15
AP1S3-205ENST00000415298 ATP11AUNQ6ZP68 121 aa14.09□□□□□ -0.15
AP1S3-205ENST00000415298 COX6A2Q02221 97 aa14.08□□□□□ -0.16
AP1S3-205ENST00000415298 C16orf90A8MZG2 172 aa14.07□□□□□ -0.16
AP1S3-205ENST00000415298 SMIM1B2RUZ4 78 aa14.07□□□□□ -0.16
AP1S3-205ENST00000415298 LOC110117498A0A087WWA1 95 aa14.06□□□□□ -0.16
AP1S3-205ENST00000415298 A6NN06 94 aa14.06□□□□□ -0.16
AP1S3-205ENST00000415298 OXLD1Q5BKU9 147 aa14.06□□□□□ -0.16
AP1S3-205ENST00000415298 Q5VV11 94 aa14.04□□□□□ -0.16
AP1S3-205ENST00000415298 LCA10Q71F78 164 aa14.04□□□□□ -0.16
AP1S3-205ENST00000415298 CHCHD7Q9BUK0 85 aa14.04□□□□□ -0.16
AP1S3-205ENST00000415298 C9orf66Q5T8R8 295 aa14.04□□□□□ -0.16
AP1S3-205ENST00000415298 SPTSSBQ8NFR3 76 aa14.04□□□□□ -0.16
AP1S3-205ENST00000415298 OCR1Q9BZK8 76 aa14.04□□□□□ -0.16
AP1S3-205ENST00000415298 DEFB131AP59861 70 aa14.03□□□□□ -0.16
AP1S3-205ENST00000415298 C7orf65Q6ZTY9 151 aa14.03□□□□□ -0.16
AP1S3-205ENST00000415298 Q8N814 137 aa14.03□□□□□ -0.16
AP1S3-205ENST00000415298 PRR26Q8N8Z3 221 aa14.03□□□□□ -0.16
AP1S3-205ENST00000415298 HIGD2AQ9BW72 106 aa14.03□□□□□ -0.16
AP1S3-205ENST00000415298 DIRC1Q969H9 104 aa14.03□□□□□ -0.16
AP1S3-205ENST00000415298 WFDC10AQ9H1F0 79 aa14.02□□□□□ -0.17
AP1S3-205ENST00000415298 ODF3L2Q3SX64 289 aa14.01□□□□□ -0.17
AP1S3-205ENST00000415298 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.01□□□□□ -0.17
AP1S3-205ENST00000415298 LINC00242Q5T6M2 205 aa14.01□□□□□ -0.17
AP1S3-205ENST00000415298 MAP6D1Q9H9H5 199 aa14.01□□□□□ -0.17
AP1S3-205ENST00000415298 KLLNB2CW77 178 aa14□□□□□ -0.17
AP1S3-205ENST00000415298 PSCAO43653 123 aa13.99□□□□□ -0.17
AP1S3-205ENST00000415298 IGKV3-20P01619 116 aa13.99□□□□□ -0.17
AP1S3-205ENST00000415298 DNHD1Q96M86 4753 aa13.99□□□□□ -0.17
AP1S3-205ENST00000415298 IGHV3-16A0A0C4DH30 117 aa13.99□□□□□ -0.17
AP1S3-205ENST00000415298 NOTCH1P46531 2555 aa13.98□□□□□ -0.17
AP1S3-205ENST00000415298 FAM19A3Q7Z5A8 133 aa13.98□□□□□ -0.17
AP1S3-205ENST00000415298 MGAM2Q2M2H8 2515 aa13.98□□□□□ -0.17
AP1S3-205ENST00000415298 M0R2N4 97 aa13.97□□□□□ -0.17
AP1S3-205ENST00000415298 LINC00467Q9BRT7 94 aa13.97□□□□□ -0.17
AP1S3-205ENST00000415298 HCG22E2RYF7 251 aa13.97□□□□□ -0.17
AP1S3-205ENST00000415298 CCL18P55774 89 aa13.97□□□□□ -0.17
AP1S3-205ENST00000415298 C19orf73Q9NVV2 129 aa13.97□□□□□ -0.17
AP1S3-205ENST00000415298 IGHV3OR16-12A0A075B7B8 117 aa13.96□□□□□ -0.18
AP1S3-205ENST00000415298 CHKB-CPT1BH3BT56 60 aa13.95□□□□□ -0.18
AP1S3-205ENST00000415298 NTM-AS1Q6ZSK4 140 aa13.95□□□□□ -0.18
AP1S3-205ENST00000415298 KRTAP10-11P60412 298 aa13.94□□□□□ -0.18
AP1S3-205ENST00000415298 SCXQ7RTU7 201 aa13.94□□□□□ -0.18
AP1S3-205ENST00000415298 NBEAL1Q6ZS30 2694 aa13.94□□□□□ -0.18
AP1S3-205ENST00000415298 TRBV6-8A0A0A6YYG3 113 aa13.93□□□□□ -0.18
AP1S3-205ENST00000415298 PDE6GP18545 87 aa13.93□□□□□ -0.18
AP1S3-205ENST00000415298 TRBV6-4A0A1B0GX49 114 aa13.91□□□□□ -0.18
AP1S3-205ENST00000415298 LINC00158P58513 81 aa13.91□□□□□ -0.18
AP1S3-205ENST00000415298 VPREB1P12018 145 aa13.9□□□□□ -0.18
AP1S3-205ENST00000415298 CYP4F30PQ9H0H9 118 aa13.9□□□□□ -0.18
AP1S3-205ENST00000415298 SPINK13Q1W4C9 94 aa13.88□□□□□ -0.19
AP1S3-205ENST00000415298 PRB2P02812 416 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms