RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 USE1Q9NZ43 259 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 PIK3C2GO75747 1445 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 ALS2Q96Q42 1657 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 DEFB131BA0A096LNP1 70 aa-3.06□□□□□ -2.9
RNU4-88P-201ENST00000411220 A0A1B0GV50 99 aa-3.06□□□□□ -2.9
RNU4-88P-201ENST00000411220 FANCAO15360 1455 aa-3.06□□□□□ -2.9
RNU4-88P-201ENST00000411220 IGLC2P0DOY2 106 aa-3.06□□□□□ -2.9
RNU4-88P-201ENST00000411220 IGLC3P0DOY3 106 aa-3.06□□□□□ -2.9
RNU4-88P-201ENST00000411220 SMAGPQ0VAQ4 97 aa-3.06□□□□□ -2.9
RNU4-88P-201ENST00000411220 OGFRL1Q5TC84 451 aaPredicted RBP-3.06□□□□□ -2.9
RNU4-88P-201ENST00000411220 SAMD13Q5VXD3 122 aa-3.06□□□□□ -2.9
RNU4-88P-201ENST00000411220 ULK3Q6PHR2 472 aa-3.06□□□□□ -2.9
RNU4-88P-201ENST00000411220 C4orf50Q6ZRC1 276 aa-3.06□□□□□ -2.9
RNU4-88P-201ENST00000411220 COMMD1Q8N668 190 aa-3.06□□□□□ -2.9
RNU4-88P-201ENST00000411220 MROH1Q8NDA8 1641 aa-3.06□□□□□ -2.9
RNU4-88P-201ENST00000411220 GAFA1Q96PS6 74 aa-3.06□□□□□ -2.9
RNU4-88P-201ENST00000411220 ANKRD30AQ9BXX3 1397 aa-3.06□□□□□ -2.9
RNU4-88P-201ENST00000411220 DIP2BQ9P265 1576 aa-3.06□□□□□ -2.9
RNU4-88P-201ENST00000411220 PZPP20742 1482 aa-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 BORCS7-ASMTA0A0B4J1R7 106 aa-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 TRAV13-2A0A0B4J235 113 aa-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 TRBV2A0A0J9YWF9 115 aa-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 F8VZ95 297 aa-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 CXCL11O14625 94 aa-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 UQCRQO14949 82 aa-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 SLC25A5P05141 298 aaKnown RBP-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 SETSIPP0DME0 302 aa-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 HSD52Q0P140 79 aa-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 BST2Q10589 180 aaKnown RBP-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 TDRG1Q3Y452 100 aa-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 TAC4Q86UU9 113 aa-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 EEF1AKMT1Q8WVE0 214 aa-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 BORCS7Q96B45 105 aa-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 FOCADQ5VW36 1801 aa-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 MYO5CQ9NQX4 1742 aa-3.07□□□□□ -2.9
RNU4-88P-201ENST00000411220 TRAV26-1A0A087WT03 109 aa-3.08□□□□□ -2.9
RNU4-88P-201ENST00000411220 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-3.08□□□□□ -2.9
RNU4-88P-201ENST00000411220 F5H5K5 113 aa-3.08□□□□□ -2.9
RNU4-88P-201ENST00000411220 MRPL33O75394 65 aaKnown RBP-3.08□□□□□ -2.9
RNU4-88P-201ENST00000411220 SERPINB1P30740 379 aa-3.08□□□□□ -2.9
RNU4-88P-201ENST00000411220 ATP5J2P56134 94 aa-3.08□□□□□ -2.9
RNU4-88P-201ENST00000411220 PMAIP1Q13794 54 aa-3.08□□□□□ -2.9
RNU4-88P-201ENST00000411220 IL18Q14116 193 aa-3.08□□□□□ -2.9
RNU4-88P-201ENST00000411220 ATP6V1FQ16864 119 aa-3.08□□□□□ -2.9
RNU4-88P-201ENST00000411220 INO80Q9ULG1 1556 aaPredicted RBP-3.08□□□□□ -2.9
RNU4-88P-201ENST00000411220 RALGAPBQ86X10 1494 aa-3.09□□□□□ -2.9
RNU4-88P-201ENST00000411220 SMIM30A4D0T7 59 aa-3.09□□□□□ -2.9
RNU4-88P-201ENST00000411220 M0R2Z0 102 aa-3.09□□□□□ -2.9
RNU4-88P-201ENST00000411220 CBX1P83916 185 aa-3.09□□□□□ -2.9
RNU4-88P-201ENST00000411220 S100A7L2Q5SY68 101 aa-3.09□□□□□ -2.9
RNU4-88P-201ENST00000411220 ATP6V1G3Q96LB4 118 aa-3.09□□□□□ -2.9
RNU4-88P-201ENST00000411220 OTORQ9NRC9 128 aa-3.09□□□□□ -2.9
RNU4-88P-201ENST00000411220 ARMC1Q9NVT9 282 aa-3.09□□□□□ -2.9
RNU4-88P-201ENST00000411220 COMMD8Q9NX08 183 aa-3.09□□□□□ -2.9
RNU4-88P-201ENST00000411220 UQCR10Q9UDW1 63 aa-3.09□□□□□ -2.9
RNU4-88P-201ENST00000411220 TCHHQ07283 1943 aa-3.09□□□□□ -2.9
RNU4-88P-201ENST00000411220 LMTK2Q8IWU2 1503 aa-3.09□□□□□ -2.9
RNU4-88P-201ENST00000411220 FHAD1B1AJZ9 1412 aa-3.1□□□□□ -2.91
RNU4-88P-201ENST00000411220 NCAPD2Q15021 1401 aa-3.1□□□□□ -2.91
RNU4-88P-201ENST00000411220 MROH2AA6NES4 1674 aa-3.1□□□□□ -2.91
RNU4-88P-201ENST00000411220 LSM1O15116 133 aaKnown RBP-3.1□□□□□ -2.91
RNU4-88P-201ENST00000411220 TPD52L2O43399 206 aaKnown RBP-3.1□□□□□ -2.91
RNU4-88P-201ENST00000411220 TMBIM4Q9HC24 238 aa-3.1□□□□□ -2.91
RNU4-88P-201ENST00000411220 SYNMO15061 1565 aa-3.1□□□□□ -2.91
RNU4-88P-201ENST00000411220 PCP4L1A6NKN8 68 aa-3.11□□□□□ -2.91
RNU4-88P-201ENST00000411220 SMIM23A6NLE4 172 aa-3.11□□□□□ -2.91
RNU4-88P-201ENST00000411220 HSBP1O75506 76 aa-3.11□□□□□ -2.91
RNU4-88P-201ENST00000411220 APOA4P06727 396 aa-3.11□□□□□ -2.91
RNU4-88P-201ENST00000411220 SCTP09683 121 aa-3.11□□□□□ -2.91
RNU4-88P-201ENST00000411220 DNAJC3Q13217 504 aa-3.11□□□□□ -2.91
RNU4-88P-201ENST00000411220 TCTE3Q8IZS6 198 aa-3.11□□□□□ -2.91
RNU4-88P-201ENST00000411220 C10orf53Q8N6V4 93 aa-3.11□□□□□ -2.91
RNU4-88P-201ENST00000411220 GPATCH11Q8N954 259 aa-3.11□□□□□ -2.91
RNU4-88P-201ENST00000411220 SLC35B4Q969S0 331 aa-3.11□□□□□ -2.91
RNU4-88P-201ENST00000411220 C7orf50Q9BRJ6 194 aaKnown RBP-3.11□□□□□ -2.91
RNU4-88P-201ENST00000411220 LINC00474Q9P2X8 69 aa-3.11□□□□□ -2.91
RNU4-88P-201ENST00000411220 PRELID3BQ9Y3B1 194 aa-3.11□□□□□ -2.91
RNU4-88P-201ENST00000411220 LTN1O94822 1766 aa-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 TRAV4A0A0B4J268 109 aa-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 SMCO3A2RU48 225 aa-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 K7EN84 100 aa-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 SSNA1O43805 119 aa-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 STX10O60499 249 aa-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 C8GP07360 202 aa-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 IL3P08700 152 aa-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 OCMP0CE72 109 aaPredicted RBP-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 IGLC6P0CF74 106 aa-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 HIST1H1BP16401 226 aaKnown RBP-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 CRIP1P50238 77 aa-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 AIF1P55008 147 aa-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 FAM45BPQ6NSW5 357 aa-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 ALKAL2Q6UX46 152 aa-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 WFDC10BQ8IUB3 73 aa-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 CCDC12Q8WUD4 166 aaPredicted RBP-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 ZMAT2Q96NC0 199 aaKnown RBP-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 IL20Q9NYY1 176 aa-3.12□□□□□ -2.91
RNU4-88P-201ENST00000411220 TRBV11-1A0A0K0K1C0 115 aa-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 SMIM27A0A1W2PRY6 76 aa-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 ATOX1O00244 68 aa-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 NDUFB1O75438 58 aa-3.13□□□□□ -2.91
Retrieved 100 of 20,778 RNA–protein pairs in 293.7 ms