RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 MRPL55Q7Z7F7 128 aaKnown RBP11.58□□□□□ -0.56
SMARCB1-204ENST00000407422 HIST1H2BLQ99880 126 aa11.58□□□□□ -0.56
SMARCB1-204ENST00000407422 FABP4P15090 132 aa11.57□□□□□ -0.56
SMARCB1-204ENST00000407422 TP73-AS1Q9UF72 201 aa11.57□□□□□ -0.56
SMARCB1-204ENST00000407422 ZNF861PO60384 105 aa11.57□□□□□ -0.56
SMARCB1-204ENST00000407422 IGLC3P0DOY3 106 aa11.57□□□□□ -0.56
SMARCB1-204ENST00000407422 COA6Q5JTJ3 125 aaKnown RBP11.57□□□□□ -0.56
SMARCB1-204ENST00000407422 IGLV1-50A0A075B6I6 118 aa11.56□□□□□ -0.56
SMARCB1-204ENST00000407422 H3BRM9 83 aa11.56□□□□□ -0.56
SMARCB1-204ENST00000407422 NUPR1O60356 82 aa11.55□□□□□ -0.56
SMARCB1-204ENST00000407422 RPL37AP8A6NKH3 93 aa11.54□□□□□ -0.56
SMARCB1-204ENST00000407422 HBDP02042 147 aa11.54□□□□□ -0.56
SMARCB1-204ENST00000407422 LINC00167Q96N53 147 aa11.54□□□□□ -0.56
SMARCB1-204ENST00000407422 IGLV5-39A0A0G2JS06 123 aa11.53□□□□□ -0.56
SMARCB1-204ENST00000407422 ZNF22P17026 224 aaPredicted RBP11.53□□□□□ -0.56
SMARCB1-204ENST00000407422 CHTOPQ9Y3Y2 248 aaKnown RBP11.53□□□□□ -0.56
SMARCB1-204ENST00000407422 TMEM238LA0A1B0GVL6 79 aa11.53□□□□□ -0.56
SMARCB1-204ENST00000407422 GAGE10A6NGK3 116 aa11.53□□□□□ -0.56
SMARCB1-204ENST00000407422 ATP5LO75964 103 aa11.53□□□□□ -0.56
SMARCB1-204ENST00000407422 TRGC2P03986 189 aa11.51□□□□□ -0.57
SMARCB1-204ENST00000407422 BCE1O60756 84 aa11.5□□□□□ -0.57
SMARCB1-204ENST00000407422 PFN2P35080 140 aa11.5□□□□□ -0.57
SMARCB1-204ENST00000407422 IGLV5-37A0A075B6J1 123 aa11.49□□□□□ -0.57
SMARCB1-204ENST00000407422 C11orf86A6NJI1 115 aa11.49□□□□□ -0.57
SMARCB1-204ENST00000407422 BAGE3Q86Y29 109 aa11.49□□□□□ -0.57
SMARCB1-204ENST00000407422 RPL13AP40429 203 aaKnown RBP11.47□□□□□ -0.57
SMARCB1-204ENST00000407422 RPL28P46779 137 aaKnown RBP11.47□□□□□ -0.57
SMARCB1-204ENST00000407422 NKAPP1Q8N9T2 125 aa11.47□□□□□ -0.57
SMARCB1-204ENST00000407422 ZNF625Q96I27 306 aaPredicted RBP11.46□□□□□ -0.57
SMARCB1-204ENST00000407422 ERG28Q9UKR5 140 aa11.46□□□□□ -0.57
SMARCB1-204ENST00000407422 TMEM170BQ5T4T1 132 aa11.46□□□□□ -0.58
SMARCB1-204ENST00000407422 SND1-IT1Q9HBX3 110 aa11.46□□□□□ -0.58
SMARCB1-204ENST00000407422 IGKV2-28A0A075B6P5 120 aa11.44□□□□□ -0.58
SMARCB1-204ENST00000407422 IGKV2D-28P01615 120 aa11.44□□□□□ -0.58
SMARCB1-204ENST00000407422 A0A087X002 238 aa11.42□□□□□ -0.58
SMARCB1-204ENST00000407422 KRTAP13-1Q8IUC0 172 aa11.42□□□□□ -0.58
SMARCB1-204ENST00000407422 VPREB1P12018 145 aa11.42□□□□□ -0.58
SMARCB1-204ENST00000407422 COL5A1-AS1Q5SY13 56 aa11.42□□□□□ -0.58
SMARCB1-204ENST00000407422 Q8NDZ9 215 aa11.42□□□□□ -0.58
SMARCB1-204ENST00000407422 HSBP1L1C9JCN9 74 aa11.41□□□□□ -0.58
SMARCB1-204ENST00000407422 COX17Q14061 63 aa11.41□□□□□ -0.58
SMARCB1-204ENST00000407422 ANAPC11Q9NYG5 84 aa11.41□□□□□ -0.58
SMARCB1-204ENST00000407422 CHCHD1Q96BP2 118 aaKnown RBP11.4□□□□□ -0.58
SMARCB1-204ENST00000407422 MIEN1Q9BRT3 115 aa11.4□□□□□ -0.58
SMARCB1-204ENST00000407422 UBE2AP49459 152 aa11.39□□□□□ -0.59
SMARCB1-204ENST00000407422 IFI27L1Q96BM0 104 aa11.38□□□□□ -0.59
SMARCB1-204ENST00000407422 TRAV12-1A0A0B4J245 112 aa11.38□□□□□ -0.59
SMARCB1-204ENST00000407422 TMEM223A0PJW6 202 aa11.38□□□□□ -0.59
SMARCB1-204ENST00000407422 TMEM238C9JI98 176 aa11.37□□□□□ -0.59
SMARCB1-204ENST00000407422 SFTA2Q6UW10 78 aa11.37□□□□□ -0.59
SMARCB1-204ENST00000407422 CRYGAP11844 174 aa11.36□□□□□ -0.59
SMARCB1-204ENST00000407422 PRLHP81277 87 aa11.36□□□□□ -0.59
SMARCB1-204ENST00000407422 RPL24P83731 157 aaKnown RBP11.36□□□□□ -0.59
SMARCB1-204ENST00000407422 C20orf202A1L168 122 aa11.35□□□□□ -0.59
SMARCB1-204ENST00000407422 TSPAN13O95857 204 aa11.35□□□□□ -0.59
SMARCB1-204ENST00000407422 PRR4Q16378 134 aa11.35□□□□□ -0.59
SMARCB1-204ENST00000407422 FAM19A2Q8N3H0 131 aa11.35□□□□□ -0.59
SMARCB1-204ENST00000407422 TMEM126AQ9H061 195 aa11.35□□□□□ -0.59
SMARCB1-204ENST00000407422 A0A0U1RRA0 63 aa11.35□□□□□ -0.59
SMARCB1-204ENST00000407422 LINC00158P58513 81 aa11.35□□□□□ -0.59
SMARCB1-204ENST00000407422 TYMSOSQ8TAI1 123 aa11.35□□□□□ -0.59
SMARCB1-204ENST00000407422 M0R378 163 aa11.33□□□□□ -0.6
SMARCB1-204ENST00000407422 KRTAP13-2Q52LG2 175 aa11.33□□□□□ -0.6
SMARCB1-204ENST00000407422 FAM19A1Q7Z5A9 133 aa11.33□□□□□ -0.6
SMARCB1-204ENST00000407422 HSBP1O75506 76 aa11.32□□□□□ -0.6
SMARCB1-204ENST00000407422 SCGB1D1O95968 90 aa11.31□□□□□ -0.6
SMARCB1-204ENST00000407422 SMIM13P0DJ93 91 aa11.3□□□□□ -0.6
SMARCB1-204ENST00000407422 UBE2V1Q13404 147 aa11.3□□□□□ -0.6
SMARCB1-204ENST00000407422 H0Y8G0 127 aa11.29□□□□□ -0.6
SMARCB1-204ENST00000407422 LINC00310P59036 64 aa11.28□□□□□ -0.6
SMARCB1-204ENST00000407422 FAM229BQ4G0N7 80 aa11.27□□□□□ -0.6
SMARCB1-204ENST00000407422 MUC2Q02817 5179 aa11.27□□□□□ -0.61
SMARCB1-204ENST00000407422 SERF1AO75920 110 aa11.26□□□□□ -0.61
SMARCB1-204ENST00000407422 MEIG1Q5JSS6 88 aa11.26□□□□□ -0.61
SMARCB1-204ENST00000407422 MIR7-3HGQ8N6C7 128 aa11.25□□□□□ -0.61
SMARCB1-204ENST00000407422 PLEKHB2Q96CS7 222 aa11.25□□□□□ -0.61
SMARCB1-204ENST00000407422 LEPROTL1O95214 131 aa11.24□□□□□ -0.61
SMARCB1-204ENST00000407422 BOD1L2Q8IYS8 172 aa11.24□□□□□ -0.61
SMARCB1-204ENST00000407422 NDUFA12Q9UI09 145 aa11.24□□□□□ -0.61
SMARCB1-204ENST00000407422 VAMP8Q9BV40 100 aa11.24□□□□□ -0.61
SMARCB1-204ENST00000407422 TSPEAR-AS2P59090 65 aa11.23□□□□□ -0.61
SMARCB1-204ENST00000407422 HERV-K104P63124 156 aa11.23□□□□□ -0.61
SMARCB1-204ENST00000407422 HIGD2AQ9BW72 106 aa11.23□□□□□ -0.61
SMARCB1-204ENST00000407422 IGKV2D-26A0A0A0MRZ7 120 aa11.22□□□□□ -0.61
SMARCB1-204ENST00000407422 NCR3O14931 201 aa11.22□□□□□ -0.61
SMARCB1-204ENST00000407422 UQCR10Q9UDW1 63 aa11.22□□□□□ -0.61
SMARCB1-204ENST00000407422 LINC00304Q8N9R0 145 aa11.21□□□□□ -0.61
SMARCB1-204ENST00000407422 MYMXA0A1B0GTQ4 84 aa11.2□□□□□ -0.62
SMARCB1-204ENST00000407422 PMCHL2Q9BQD1 86 aa11.2□□□□□ -0.62
SMARCB1-204ENST00000407422 BATFQ16520 125 aa11.19□□□□□ -0.62
SMARCB1-204ENST00000407422 C3orf22Q8N5N4 141 aa11.19□□□□□ -0.62
SMARCB1-204ENST00000407422 RETNLBQ9BQ08 111 aa11.19□□□□□ -0.62
SMARCB1-204ENST00000407422 LEPROTO15243 131 aa11.18□□□□□ -0.62
SMARCB1-204ENST00000407422 DAND5Q8N907 189 aa11.18□□□□□ -0.62
SMARCB1-204ENST00000407422 PRYO14603 147 aa11.17□□□□□ -0.62
SMARCB1-204ENST00000407422 PLNP26678 52 aa11.17□□□□□ -0.62
SMARCB1-204ENST00000407422 VPS25Q9BRG1 176 aa11.17□□□□□ -0.62
SMARCB1-204ENST00000407422 HSPB8Q9UJY1 196 aa11.17□□□□□ -0.62
SMARCB1-204ENST00000407422 SPRR4Q96PI1 79 aa11.17□□□□□ -0.62
SMARCB1-204ENST00000407422 KCNQ1DNQ9H478 68 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms