RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 CHKB-CPT1BH3BT56 60 aa6.22□□□□□ -1.41
MSH5-205ENST00000395853 ESM1Q9NQ30 184 aa6.22□□□□□ -1.41
MSH5-205ENST00000395853 RNASE13Q5GAN3 156 aaKnown RBP6.22□□□□□ -1.41
MSH5-205ENST00000395853 LINC00337Q8N6G1 96 aa6.22□□□□□ -1.41
MSH5-205ENST00000395853 MSMBP08118 114 aa6.21□□□□□ -1.41
MSH5-205ENST00000395853 RNASE3P12724 160 aaKnown RBP6.21□□□□□ -1.41
MSH5-205ENST00000395853 KLK9Q2XQG4 91 aa6.21□□□□□ -1.41
MSH5-205ENST00000395853 KLK9Q9UKQ9 250 aa6.21□□□□□ -1.41
MSH5-205ENST00000395853 LENEPQ9Y5L5 61 aa6.21□□□□□ -1.41
MSH5-205ENST00000395853 IGHV3OR16-13A0A075B7E8 117 aa6.21□□□□□ -1.42
MSH5-205ENST00000395853 IGHV3-74A0A0B4J1X5 117 aa6.21□□□□□ -1.42
MSH5-205ENST00000395853 IGHV3-66A0A0C4DH42 116 aa6.21□□□□□ -1.42
MSH5-205ENST00000395853 TRBV10-1A0A0K0K1A3 114 aa6.21□□□□□ -1.42
MSH5-205ENST00000395853 H3BUX3 64 aa6.2□□□□□ -1.42
MSH5-205ENST00000395853 PSCAO43653 123 aa6.2□□□□□ -1.42
MSH5-205ENST00000395853 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.2□□□□□ -1.42
MSH5-205ENST00000395853 IGHV3-49A0A0A0MS15 119 aa6.2□□□□□ -1.42
MSH5-205ENST00000395853 CLPSL1A2RUU4 121 aa6.2□□□□□ -1.42
MSH5-205ENST00000395853 C19orf54Q5BKX5 351 aa6.2□□□□□ -1.42
MSH5-205ENST00000395853 LCE2DQ5TA82 110 aaPredicted RBP6.2□□□□□ -1.42
MSH5-205ENST00000395853 FAM104AQ969W3 186 aa6.2□□□□□ -1.42
MSH5-205ENST00000395853 CDKN2A-AS1Q9UH64 79 aa6.2□□□□□ -1.42
MSH5-205ENST00000395853 HIGD2AQ9BW72 106 aa6.19□□□□□ -1.42
MSH5-205ENST00000395853 IGHV3-38A0A0C4DH36 116 aa6.19□□□□□ -1.42
MSH5-205ENST00000395853 GNRH2O43555 120 aa6.19□□□□□ -1.42
MSH5-205ENST00000395853 MGAM2Q2M2H8 2515 aa6.19□□□□□ -1.42
MSH5-205ENST00000395853 IGKV2-28A0A075B6P5 120 aa6.19□□□□□ -1.42
MSH5-205ENST00000395853 A6NDX4 124 aa6.19□□□□□ -1.42
MSH5-205ENST00000395853 M0QY20 66 aa6.19□□□□□ -1.42
MSH5-205ENST00000395853 IGKV2D-28P01615 120 aa6.19□□□□□ -1.42
MSH5-205ENST00000395853 MEGF8Q7Z7M0 2845 aa6.18□□□□□ -1.42
MSH5-205ENST00000395853 TRBV6-8A0A0A6YYG3 113 aa6.18□□□□□ -1.42
MSH5-205ENST00000395853 FAM74A4Q5TZK3 123 aa6.18□□□□□ -1.42
MSH5-205ENST00000395853 Q6ZQT0 140 aa6.18□□□□□ -1.42
MSH5-205ENST00000395853 ZFAND2AQ8N6M9 145 aa6.18□□□□□ -1.42
MSH5-205ENST00000395853 OCR1Q9BZK8 76 aa6.18□□□□□ -1.42
MSH5-205ENST00000395853 SND1-IT1Q9HBX3 110 aa6.18□□□□□ -1.42
MSH5-205ENST00000395853 IGLV5-39A0A0G2JS06 123 aa6.17□□□□□ -1.42
MSH5-205ENST00000395853 K7EQG2 157 aa6.17□□□□□ -1.42
MSH5-205ENST00000395853 LINC00167Q96N53 147 aa6.17□□□□□ -1.42
MSH5-205ENST00000395853 IGLV5-45A0A087WSX0 123 aa6.17□□□□□ -1.42
MSH5-205ENST00000395853 IGHV3-11P01762 117 aa6.16□□□□□ -1.42
MSH5-205ENST00000395853 LINC01554Q52M75 96 aa6.16□□□□□ -1.42
MSH5-205ENST00000395853 SORL1Q92673 2214 aa6.16□□□□□ -1.42
MSH5-205ENST00000395853 MUC4Q99102 2169 aa6.16□□□□□ -1.42
MSH5-205ENST00000395853 LOC110117498A0A087WWA1 95 aa6.15□□□□□ -1.42
MSH5-205ENST00000395853 DEFB112Q30KQ8 113 aa6.15□□□□□ -1.42
MSH5-205ENST00000395853 LIMD2Q9BT23 127 aa6.15□□□□□ -1.42
MSH5-205ENST00000395853 CYP4F30PQ9H0H9 118 aa6.15□□□□□ -1.42
MSH5-205ENST00000395853 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.15□□□□□ -1.43
MSH5-205ENST00000395853 IGHV4-59P01825 116 aa6.15□□□□□ -1.43
MSH5-205ENST00000395853 TENM1Q9UKZ4 2725 aa6.15□□□□□ -1.43
MSH5-205ENST00000395853 FSHBP01225 129 aa6.14□□□□□ -1.43
MSH5-205ENST00000395853 LINC00313P59037 77 aa6.14□□□□□ -1.43
MSH5-205ENST00000395853 A6NED7 52 aa6.13□□□□□ -1.43
MSH5-205ENST00000395853 RNASE1P07998 156 aaKnown RBP6.13□□□□□ -1.43
MSH5-205ENST00000395853 SCXQ7RTU7 201 aa6.13□□□□□ -1.43
MSH5-205ENST00000395853 IGLV1-40P01703 118 aa6.13□□□□□ -1.43
MSH5-205ENST00000395853 C10orf99Q6UWK7 81 aa6.13□□□□□ -1.43
MSH5-205ENST00000395853 Q8N814 137 aa6.13□□□□□ -1.43
MSH5-205ENST00000395853 USMG5Q96IX5 58 aa6.12□□□□□ -1.43
MSH5-205ENST00000395853 CDC42SE1Q9NRR8 79 aa6.12□□□□□ -1.43
MSH5-205ENST00000395853 H3BUA1 57 aa6.12□□□□□ -1.43
MSH5-205ENST00000395853 NDUFA4O00483 81 aa6.12□□□□□ -1.43
MSH5-205ENST00000395853 DEFB1P60022 68 aa6.12□□□□□ -1.43
MSH5-205ENST00000395853 SMIM1B2RUZ4 78 aa6.11□□□□□ -1.43
MSH5-205ENST00000395853 M0R2N4 97 aa6.11□□□□□ -1.43
MSH5-205ENST00000395853 NTM-AS1Q6ZSK4 140 aa6.11□□□□□ -1.43
MSH5-205ENST00000395853 PRR15LQ9BU68 103 aa6.11□□□□□ -1.43
MSH5-205ENST00000395853 IGKV3-7A0A075B6H7 116 aa6.11□□□□□ -1.43
MSH5-205ENST00000395853 PDE6GP18545 87 aa6.11□□□□□ -1.43
MSH5-205ENST00000395853 COX6A2Q02221 97 aa6.11□□□□□ -1.43
MSH5-205ENST00000395853 Q75L30 129 aa6.1□□□□□ -1.43
MSH5-205ENST00000395853 MP68P56378 58 aa6.1□□□□□ -1.43
MSH5-205ENST00000395853 NANOS2P60321 138 aaKnown RBP6.1□□□□□ -1.43
MSH5-205ENST00000395853 LOC100131303A0A0U1RQF7 123 aa6.09□□□□□ -1.43
MSH5-205ENST00000395853 DNAJC9-AS1A6NH13 148 aa6.09□□□□□ -1.43
MSH5-205ENST00000395853 C9orf116Q5BN46 136 aaPredicted RBP6.09□□□□□ -1.43
MSH5-205ENST00000395853 Q8N9P0 234 aaPredicted RBP6.09□□□□□ -1.43
MSH5-205ENST00000395853 RHPN1-AS1Q9BWJ2 59 aa6.09□□□□□ -1.43
MSH5-205ENST00000395853 TGP01266 2768 aa6.09□□□□□ -1.44
MSH5-205ENST00000395853 MOBPQ13875 183 aa6.08□□□□□ -1.44
MSH5-205ENST00000395853 TRRAPQ9Y4A5 3859 aa6.08□□□□□ -1.44
MSH5-205ENST00000395853 CCL18P55774 89 aa6.08□□□□□ -1.44
MSH5-205ENST00000395853 Q6YL49 198 aa6.08□□□□□ -1.44
MSH5-205ENST00000395853 LINC00242Q5T6M2 205 aa6.07□□□□□ -1.44
MSH5-205ENST00000395853 C9orf66Q5T8R8 295 aa6.07□□□□□ -1.44
MSH5-205ENST00000395853 CDC42SE2Q9NRR3 84 aa6.07□□□□□ -1.44
MSH5-205ENST00000395853 PKD1L1Q8TDX9 2849 aa6.06□□□□□ -1.44
MSH5-205ENST00000395853 LCE6AA0A183 80 aa6.06□□□□□ -1.44
MSH5-205ENST00000395853 CHCHD7Q9BUK0 85 aa6.06□□□□□ -1.44
MSH5-205ENST00000395853 LINC00158P58513 81 aa6.06□□□□□ -1.44
MSH5-205ENST00000395853 ZNF702PQ9H963 129 aa6.06□□□□□ -1.44
MSH5-205ENST00000395853 KLLNB2CW77 178 aa6.05□□□□□ -1.44
MSH5-205ENST00000395853 PRR4Q16378 134 aa6.05□□□□□ -1.44
MSH5-205ENST00000395853 KRTAP3-3Q9BYR6 98 aa6.05□□□□□ -1.44
MSH5-205ENST00000395853 KRTAP3-2Q9BYR7 98 aa6.05□□□□□ -1.44
MSH5-205ENST00000395853 TRBV6-4A0A1B0GX49 114 aa6.05□□□□□ -1.44
MSH5-205ENST00000395853 PRB2P02812 416 aaPredicted RBP6.05□□□□□ -1.44
MSH5-205ENST00000395853 IGKV4-1P06312 121 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms