RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 UBE2BP63146 152 aa3.68□□□□□ -1.82
PTPN20-208ENST00000395727 LBHQ53QV2 105 aaPredicted RBP3.68□□□□□ -1.82
PTPN20-208ENST00000395727 SFTA2Q6UW10 78 aa3.68□□□□□ -1.82
PTPN20-208ENST00000395727 FA2HQ7L5A8 372 aa3.68□□□□□ -1.82
PTPN20-208ENST00000395727 LINC00469Q8N7U9 141 aa3.68□□□□□ -1.82
PTPN20-208ENST00000395727 COX7B2Q8TF08 81 aa3.68□□□□□ -1.82
PTPN20-208ENST00000395727 SMCO4Q9NRQ5 59 aa3.68□□□□□ -1.82
PTPN20-208ENST00000395727 C22orf24Q9Y442 160 aa3.68□□□□□ -1.82
PTPN20-208ENST00000395727 H3BRM9 83 aa3.67□□□□□ -1.82
PTPN20-208ENST00000395727 ZNF861PO60384 105 aa3.67□□□□□ -1.82
PTPN20-208ENST00000395727 MRPL55Q7Z7F7 128 aaKnown RBP3.67□□□□□ -1.82
PTPN20-208ENST00000395727 C18orf32Q8TCD1 76 aa3.67□□□□□ -1.82
PTPN20-208ENST00000395727 RPS10P5Q9NQ39 176 aa3.67□□□□□ -1.82
PTPN20-208ENST00000395727 BCE1O60756 84 aa3.66□□□□□ -1.82
PTPN20-208ENST00000395727 SNAPINO95295 136 aa3.66□□□□□ -1.82
PTPN20-208ENST00000395727 HBDP02042 147 aa3.66□□□□□ -1.82
PTPN20-208ENST00000395727 LINC00614P0C842 121 aa3.66□□□□□ -1.82
PTPN20-208ENST00000395727 RAB5BP61020 215 aa3.66□□□□□ -1.82
PTPN20-208ENST00000395727 RPL24P83731 157 aaKnown RBP3.66□□□□□ -1.82
PTPN20-208ENST00000395727 FABP9Q0Z7S8 132 aa3.66□□□□□ -1.82
PTPN20-208ENST00000395727 COX17Q14061 63 aa3.66□□□□□ -1.82
PTPN20-208ENST00000395727 SVBPQ8N300 66 aa3.66□□□□□ -1.82
PTPN20-208ENST00000395727 XAGE1AQ9HD64 81 aa3.66□□□□□ -1.82
PTPN20-208ENST00000395727 TNXBP22105 4242 aa3.65□□□□□ -1.82
PTPN20-208ENST00000395727 ATP5LO75964 103 aa3.65□□□□□ -1.83
PTPN20-208ENST00000395727 SPINK8P0C7L1 97 aa3.65□□□□□ -1.83
PTPN20-208ENST00000395727 ZNF22P17026 224 aaPredicted RBP3.65□□□□□ -1.83
PTPN20-208ENST00000395727 RPL28P46779 137 aaKnown RBP3.65□□□□□ -1.83
PTPN20-208ENST00000395727 KRTAP13-1Q8IUC0 172 aa3.65□□□□□ -1.83
PTPN20-208ENST00000395727 TRAPPC1Q9Y5R8 145 aa3.65□□□□□ -1.83
PTPN20-208ENST00000395727 TRAV12-1A0A0B4J245 112 aa3.64□□□□□ -1.83
PTPN20-208ENST00000395727 CTAG1AP78358 180 aa3.64□□□□□ -1.83
PTPN20-208ENST00000395727 NDUFA5Q16718 116 aa3.64□□□□□ -1.83
PTPN20-208ENST00000395727 LINC00167Q96N53 147 aa3.64□□□□□ -1.83
PTPN20-208ENST00000395727 YPEL4Q96NS1 127 aa3.64□□□□□ -1.83
PTPN20-208ENST00000395727 APOC3P02656 99 aa3.63□□□□□ -1.83
PTPN20-208ENST00000395727 NKAPP1Q8N9T2 125 aa3.63□□□□□ -1.83
PTPN20-208ENST00000395727 CHCHD1Q96BP2 118 aaKnown RBP3.63□□□□□ -1.83
PTPN20-208ENST00000395727 ZNF625Q96I27 306 aaPredicted RBP3.63□□□□□ -1.83
PTPN20-208ENST00000395727 ERG28Q9UKR5 140 aa3.63□□□□□ -1.83
PTPN20-208ENST00000395727 UBR4Q5T4S7 5183 aa3.63□□□□□ -1.83
PTPN20-208ENST00000395727 C11orf86A6NJI1 115 aa3.62□□□□□ -1.83
PTPN20-208ENST00000395727 VPREB1P12018 145 aa3.62□□□□□ -1.83
PTPN20-208ENST00000395727 UBE2V1Q13404 147 aa3.62□□□□□ -1.83
PTPN20-208ENST00000395727 FAM229BQ4G0N7 80 aa3.62□□□□□ -1.83
PTPN20-208ENST00000395727 GAGE2AQ6NT46 116 aa3.62□□□□□ -1.83
PTPN20-208ENST00000395727 BAGE3Q86Y29 109 aa3.62□□□□□ -1.83
PTPN20-208ENST00000395727 SND1-IT1Q9HBX3 110 aa3.62□□□□□ -1.83
PTPN20-208ENST00000395727 CRYGAP11844 174 aa3.61□□□□□ -1.83
PTPN20-208ENST00000395727 CHTOPQ9Y3Y2 248 aaKnown RBP3.61□□□□□ -1.83
PTPN20-208ENST00000395727 A0A087X002 238 aa3.6□□□□□ -1.83
PTPN20-208ENST00000395727 TMEM223A0PJW6 202 aa3.6□□□□□ -1.83
PTPN20-208ENST00000395727 RPL37AP8A6NKH3 93 aa3.6□□□□□ -1.83
PTPN20-208ENST00000395727 PFN2P35080 140 aa3.6□□□□□ -1.83
PTPN20-208ENST00000395727 NDUFA6P56556 154 aa3.6□□□□□ -1.83
PTPN20-208ENST00000395727 PMCHL1Q16048 86 aa3.6□□□□□ -1.83
PTPN20-208ENST00000395727 TMEM170BQ5T4T1 132 aa3.6□□□□□ -1.83
PTPN20-208ENST00000395727 IFI27L1Q96BM0 104 aa3.6□□□□□ -1.83
PTPN20-208ENST00000395727 TMEM126AQ9H061 195 aa3.6□□□□□ -1.83
PTPN20-208ENST00000395727 IGKV2-28A0A075B6P5 120 aa3.59□□□□□ -1.83
PTPN20-208ENST00000395727 IGKV2D-26A0A0A0MRZ7 120 aa3.59□□□□□ -1.83
PTPN20-208ENST00000395727 LINC00587B1AMM8 73 aa3.59□□□□□ -1.83
PTPN20-208ENST00000395727 HSBP1O75506 76 aa3.59□□□□□ -1.83
PTPN20-208ENST00000395727 IGKV2D-28P01615 120 aa3.59□□□□□ -1.83
PTPN20-208ENST00000395727 LINC01547P58512 204 aaPredicted RBP3.59□□□□□ -1.83
PTPN20-208ENST00000395727 HERV-K104P63124 156 aa3.59□□□□□ -1.83
PTPN20-208ENST00000395727 LRP2P98164 4655 aa3.59□□□□□ -1.83
PTPN20-208ENST00000395727 LOC107984156A0A0G2JMH3 177 aa3.58□□□□□ -1.84
PTPN20-208ENST00000395727 M0R378 163 aa3.58□□□□□ -1.84
PTPN20-208ENST00000395727 UBE2AP49459 152 aa3.58□□□□□ -1.84
PTPN20-208ENST00000395727 KRTAP13-2Q52LG2 175 aa3.58□□□□□ -1.84
PTPN20-208ENST00000395727 ARL17AQ8IVW1 177 aa3.58□□□□□ -1.84
PTPN20-208ENST00000395727 Q8NDZ9 215 aa3.58□□□□□ -1.84
PTPN20-208ENST00000395727 TYMSOSQ8TAI1 123 aa3.58□□□□□ -1.84
PTPN20-208ENST00000395727 SPRR1AP35321 89 aa3.57□□□□□ -1.84
PTPN20-208ENST00000395727 TMEM238C9JI98 176 aa3.56□□□□□ -1.84
PTPN20-208ENST00000395727 KRTAP4-16G5E9R7 235 aaPredicted RBP3.56□□□□□ -1.84
PTPN20-208ENST00000395727 SCO1O75880 301 aa3.56□□□□□ -1.84
PTPN20-208ENST00000395727 LEPROTL1O95214 131 aa3.56□□□□□ -1.84
PTPN20-208ENST00000395727 CFC1BP0CG36 223 aa3.56□□□□□ -1.84
PTPN20-208ENST00000395727 CFC1P0CG37 223 aa3.56□□□□□ -1.84
PTPN20-208ENST00000395727 PLNP26678 52 aa3.56□□□□□ -1.84
PTPN20-208ENST00000395727 PRLHP81277 87 aa3.56□□□□□ -1.84
PTPN20-208ENST00000395727 FAM19A1Q7Z5A9 133 aa3.56□□□□□ -1.84
PTPN20-208ENST00000395727 CBLN2Q8IUK8 224 aa3.56□□□□□ -1.84
PTPN20-208ENST00000395727 LINC00337Q8N6G1 96 aa3.56□□□□□ -1.84
PTPN20-208ENST00000395727 PLEKHB2Q96CS7 222 aa3.56□□□□□ -1.84
PTPN20-208ENST00000395727 MAP1LC3CQ9BXW4 147 aa3.56□□□□□ -1.84
PTPN20-208ENST00000395727 KCNQ1DNQ9H478 68 aa3.56□□□□□ -1.84
PTPN20-208ENST00000395727 TRBV10-2A0A0K0K1G8 114 aa3.55□□□□□ -1.84
PTPN20-208ENST00000395727 MYMXA0A1B0GTQ4 84 aa3.55□□□□□ -1.84
PTPN20-208ENST00000395727 SERF1AO75920 110 aa3.55□□□□□ -1.84
PTPN20-208ENST00000395727 TRGC2P03986 189 aa3.55□□□□□ -1.84
PTPN20-208ENST00000395727 SMIM13P0DJ93 91 aa3.55□□□□□ -1.84
PTPN20-208ENST00000395727 NMUP48645 174 aa3.55□□□□□ -1.84
PTPN20-208ENST00000395727 LINC00158P58513 81 aa3.55□□□□□ -1.84
PTPN20-208ENST00000395727 PRR4Q16378 134 aa3.55□□□□□ -1.84
PTPN20-208ENST00000395727 FAM19A2Q8N3H0 131 aa3.55□□□□□ -1.84
PTPN20-208ENST00000395727 MIR7-3HGQ8N6C7 128 aa3.55□□□□□ -1.84
PTPN20-208ENST00000395727 LINC00304Q8N9R0 145 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms