RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 CDC42SE1Q9NRR8 79 aa2.2□□□□□ -2.06
PTPRC-202ENST00000367364 ROS1P08922 2347 aa2.2□□□□□ -2.06
PTPRC-202ENST00000367364 USP34Q70CQ2 3546 aa2.19□□□□□ -2.06
PTPRC-202ENST00000367364 FCGBPQ9Y6R7 5405 aaPredicted RBP2.19□□□□□ -2.06
PTPRC-202ENST00000367364 IGHV1OR15-1A0A075B7D0 117 aa2.19□□□□□ -2.06
PTPRC-202ENST00000367364 IGHV3OR16-9A0A0B4J2B5 98 aa2.19□□□□□ -2.06
PTPRC-202ENST00000367364 A0A1B0GW54 56 aa2.19□□□□□ -2.06
PTPRC-202ENST00000367364 NDUFA4O00483 81 aa2.19□□□□□ -2.06
PTPRC-202ENST00000367364 CLEC19AQ6UXS0 136 aa2.19□□□□□ -2.06
PTPRC-202ENST00000367364 CDC42SE2Q9NRR3 84 aa2.19□□□□□ -2.06
PTPRC-202ENST00000367364 CHD7Q9P2D1 2997 aa2.19□□□□□ -2.06
PTPRC-202ENST00000367364 MINOS1-NBL1R4GNA1 71 aa2.19□□□□□ -2.06
PTPRC-202ENST00000367364 APC2O95996 2303 aa2.19□□□□□ -2.06
PTPRC-202ENST00000367364 COL6A6A6NMZ7 2263 aa2.18□□□□□ -2.06
PTPRC-202ENST00000367364 IGLV4-60A0A075B6I1 120 aa2.18□□□□□ -2.06
PTPRC-202ENST00000367364 HCG22E2RYF7 251 aa2.18□□□□□ -2.06
PTPRC-202ENST00000367364 C3orf84H3BNL1 204 aa2.18□□□□□ -2.06
PTPRC-202ENST00000367364 CNBPP62633 177 aaKnown RBP2.18□□□□□ -2.06
PTPRC-202ENST00000367364 RNASE13Q5GAN3 156 aaKnown RBP2.18□□□□□ -2.06
PTPRC-202ENST00000367364 LINC01006Q8NI28 216 aa2.18□□□□□ -2.06
PTPRC-202ENST00000367364 COX7B2Q8TF08 81 aa2.18□□□□□ -2.06
PTPRC-202ENST00000367364 DEFB104AQ8WTQ1 72 aa2.18□□□□□ -2.06
PTPRC-202ENST00000367364 HIGD2AQ9BW72 106 aa2.18□□□□□ -2.06
PTPRC-202ENST00000367364 TPRP12270 2363 aaKnown RBP2.18□□□□□ -2.06
PTPRC-202ENST00000367364 TRANK1O15050 2925 aa2.18□□□□□ -2.06
PTPRC-202ENST00000367364 RP1L1Q8IWN7 2480 aaPredicted RBP2.17□□□□□ -2.06
PTPRC-202ENST00000367364 IGHV3OR16-8A0A075B7F1 116 aa2.17□□□□□ -2.06
PTPRC-202ENST00000367364 IGHV3-49A0A0A0MS15 119 aa2.17□□□□□ -2.06
PTPRC-202ENST00000367364 IGHV3-66A0A0C4DH42 116 aa2.17□□□□□ -2.06
PTPRC-202ENST00000367364 H3BUA1 57 aa2.17□□□□□ -2.06
PTPRC-202ENST00000367364 PSPHP1O15172 72 aa2.17□□□□□ -2.06
PTPRC-202ENST00000367364 COX7BP24311 80 aa2.17□□□□□ -2.06
PTPRC-202ENST00000367364 DEFB1P60022 68 aa2.17□□□□□ -2.06
PTPRC-202ENST00000367364 HAMPP81172 84 aa2.17□□□□□ -2.06
PTPRC-202ENST00000367364 MOBPQ13875 183 aa2.17□□□□□ -2.06
PTPRC-202ENST00000367364 FAM74A4Q5TZK3 123 aa2.17□□□□□ -2.06
PTPRC-202ENST00000367364 Q8N9L7 120 aa2.17□□□□□ -2.06
PTPRC-202ENST00000367364 KCNQ1DNQ9H478 68 aa2.17□□□□□ -2.06
PTPRC-202ENST00000367364 MKI67P46013 3256 aaKnown RBP2.17□□□□□ -2.06
PTPRC-202ENST00000367364 NCOR1O75376 2440 aa2.17□□□□□ -2.06
PTPRC-202ENST00000367364 BRCA2P51587 3418 aa2.16□□□□□ -2.06
PTPRC-202ENST00000367364 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.16□□□□□ -2.06
PTPRC-202ENST00000367364 NDUFB1O75438 58 aa2.16□□□□□ -2.06
PTPRC-202ENST00000367364 COX17Q14061 63 aa2.16□□□□□ -2.06
PTPRC-202ENST00000367364 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.16□□□□□ -2.06
PTPRC-202ENST00000367364 DEFB119Q8N690 84 aa2.16□□□□□ -2.06
PTPRC-202ENST00000367364 DHRS4-AS1Q9P1J3 65 aa2.16□□□□□ -2.06
PTPRC-202ENST00000367364 LINC01558Q9Y6Z2 57 aa2.16□□□□□ -2.06
PTPRC-202ENST00000367364 CHD9Q3L8U1 2897 aa2.16□□□□□ -2.06
PTPRC-202ENST00000367364 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.15□□□□□ -2.07
PTPRC-202ENST00000367364 TRGV2A0A075B6R0 118 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 IGHV3OR16-13A0A075B7E8 117 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 IGHV3-74A0A0B4J1X5 117 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 ETDCA0A1B0GVM5 59 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 H3BPC8 53 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 IGLV6-57P01721 117 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 CCL5P13501 91 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 COX7A1P24310 79 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 LINC01554Q52M75 96 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 DEFB132Q7Z7B7 95 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 Q8IZM0 81 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 CNEP1R1Q8N9A8 125 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 NKAPP1Q8N9T2 125 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 Q8NDZ9 215 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 FAM215AQ9Y5M1 114 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 C5orf42Q9H799 3197 aa2.15□□□□□ -2.07
PTPRC-202ENST00000367364 EP300Q09472 2414 aaPredicted RBP2.15□□□□□ -2.07
PTPRC-202ENST00000367364 NBEAQ8NFP9 2946 aa2.14□□□□□ -2.07
PTPRC-202ENST00000367364 CFAP47Q6ZTR5 3102 aa2.14□□□□□ -2.07
PTPRC-202ENST00000367364 IGLV5-48A0A075B6I7 105 aa2.14□□□□□ -2.07
PTPRC-202ENST00000367364 CCL24O00175 119 aa2.14□□□□□ -2.07
PTPRC-202ENST00000367364 LINC00158P58513 81 aa2.14□□□□□ -2.07
PTPRC-202ENST00000367364 LINC00313P59037 77 aa2.14□□□□□ -2.07
PTPRC-202ENST00000367364 C6orf99Q4VX62 202 aa2.14□□□□□ -2.07
PTPRC-202ENST00000367364 C9orf116Q5BN46 136 aaPredicted RBP2.14□□□□□ -2.07
PTPRC-202ENST00000367364 C5orf56Q8N8D9 126 aa2.14□□□□□ -2.07
PTPRC-202ENST00000367364 C9orf163Q8N9P6 203 aa2.14□□□□□ -2.07
PTPRC-202ENST00000367364 USMG5Q96IX5 58 aa2.14□□□□□ -2.07
PTPRC-202ENST00000367364 B9D2Q9BPU9 175 aa2.14□□□□□ -2.07
PTPRC-202ENST00000367364 RHPN1-AS1Q9BWJ2 59 aa2.14□□□□□ -2.07
PTPRC-202ENST00000367364 WNK1Q9H4A3 2382 aa2.14□□□□□ -2.07
PTPRC-202ENST00000367364 ABCA2Q9BZC7 2435 aa2.13□□□□□ -2.07
PTPRC-202ENST00000367364 VPS13AQ96RL7 3174 aa2.13□□□□□ -2.07
PTPRC-202ENST00000367364 CACNA1HO95180 2353 aa2.13□□□□□ -2.07
PTPRC-202ENST00000367364 IGHV3-73A0A0B4J1V6 119 aa2.13□□□□□ -2.07
PTPRC-202ENST00000367364 G3V318 75 aa2.13□□□□□ -2.07
PTPRC-202ENST00000367364 CHKB-CPT1BH3BT56 60 aa2.13□□□□□ -2.07
PTPRC-202ENST00000367364 IGHV3-11P01762 117 aa2.13□□□□□ -2.07
PTPRC-202ENST00000367364 BSPH1Q075Z2 132 aa2.13□□□□□ -2.07
PTPRC-202ENST00000367364 SCXQ7RTU7 201 aa2.13□□□□□ -2.07
PTPRC-202ENST00000367364 MGAQ8IWI9 3026 aa2.13□□□□□ -2.07
PTPRC-202ENST00000367364 AKAP6Q13023 2319 aa2.13□□□□□ -2.07
PTPRC-202ENST00000367364 FBN1P35555 2871 aaKnown RBP2.12□□□□□ -2.07
PTPRC-202ENST00000367364 SPTBN5Q9NRC6 3674 aaKnown RBP2.12□□□□□ -2.07
PTPRC-202ENST00000367364 CFAP54Q96N23 3096 aa2.12□□□□□ -2.07
PTPRC-202ENST00000367364 ALMS1Q8TCU4 4167 aa2.12□□□□□ -2.07
PTPRC-202ENST00000367364 PTPRZ1P23471 2315 aaPredicted RBP2.12□□□□□ -2.07
PTPRC-202ENST00000367364 ZZEF1O43149 2961 aa2.12□□□□□ -2.07
PTPRC-202ENST00000367364 LRCOL1A6NCL2 159 aa2.12□□□□□ -2.07
PTPRC-202ENST00000367364 PRB3Q04118 309 aaPredicted RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms