RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 HIGD2AQ9BW72 106 aa9.71□□□□□ -0.85
COL6A1-201ENST00000361866 H3BQ85 93 aa9.71□□□□□ -0.86
COL6A1-201ENST00000361866 COX17Q14061 63 aa9.71□□□□□ -0.86
COL6A1-201ENST00000361866 RPL37AP8A6NKH3 93 aa9.7□□□□□ -0.86
COL6A1-201ENST00000361866 LRCOL1A6NCL2 159 aa9.69□□□□□ -0.86
COL6A1-201ENST00000361866 LELP1Q5T871 98 aa9.69□□□□□ -0.86
COL6A1-201ENST00000361866 SERP1Q9Y6X1 66 aa9.69□□□□□ -0.86
COL6A1-201ENST00000361866 CDK2AP2O75956 126 aa9.68□□□□□ -0.86
COL6A1-201ENST00000361866 CRYGAP11844 174 aa9.68□□□□□ -0.86
COL6A1-201ENST00000361866 Q8N9L7 120 aa9.68□□□□□ -0.86
COL6A1-201ENST00000361866 SYCNQ0VAF6 134 aa9.68□□□□□ -0.86
COL6A1-201ENST00000361866 KPRPQ5T749 579 aaPredicted RBP9.68□□□□□ -0.86
COL6A1-201ENST00000361866 RMI2Q96E14 147 aa9.68□□□□□ -0.86
COL6A1-201ENST00000361866 DMDP11532 3685 aa9.67□□□□□ -0.86
COL6A1-201ENST00000361866 Q6ZVQ6 151 aa9.67□□□□□ -0.86
COL6A1-201ENST00000361866 MIFP14174 115 aa9.67□□□□□ -0.86
COL6A1-201ENST00000361866 MRPL55Q7Z7F7 128 aaKnown RBP9.67□□□□□ -0.86
COL6A1-201ENST00000361866 TRAV7A0A075B6U4 112 aa9.66□□□□□ -0.86
COL6A1-201ENST00000361866 LINC00575Q6W349 94 aa9.66□□□□□ -0.86
COL6A1-201ENST00000361866 NDUFS5O43920 106 aa9.66□□□□□ -0.86
COL6A1-201ENST00000361866 A0A1B0GUV1 79 aa9.65□□□□□ -0.86
COL6A1-201ENST00000361866 MP68P56378 58 aa9.65□□□□□ -0.86
COL6A1-201ENST00000361866 FAM19A3Q7Z5A8 133 aa9.65□□□□□ -0.86
COL6A1-201ENST00000361866 DEFB131BA0A096LNP1 70 aa9.65□□□□□ -0.86
COL6A1-201ENST00000361866 TEX15Q9BXT5 2789 aa9.65□□□□□ -0.87
COL6A1-201ENST00000361866 TNRC18O15417 2968 aaPredicted RBP9.65□□□□□ -0.87
COL6A1-201ENST00000361866 M0R378 163 aa9.64□□□□□ -0.87
COL6A1-201ENST00000361866 LINC01547P58512 204 aaPredicted RBP9.64□□□□□ -0.87
COL6A1-201ENST00000361866 RPS28P62857 69 aaKnown RBP9.64□□□□□ -0.87
COL6A1-201ENST00000361866 C10orf25Q5T742 122 aa9.64□□□□□ -0.87
COL6A1-201ENST00000361866 PRO0628Q9UI54 55 aa9.64□□□□□ -0.87
COL6A1-201ENST00000361866 LAMA5O15230 3695 aa9.64□□□□□ -0.87
COL6A1-201ENST00000361866 MAST4O15021 2626 aa9.64□□□□□ -0.87
COL6A1-201ENST00000361866 C9orf129Q5T035 196 aaKnown RBP9.64□□□□□ -0.87
COL6A1-201ENST00000361866 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.64□□□□□ -0.87
COL6A1-201ENST00000361866 C11orf45Q8TAV5 145 aa9.64□□□□□ -0.87
COL6A1-201ENST00000361866 NDUFC1O43677 76 aa9.63□□□□□ -0.87
COL6A1-201ENST00000361866 FAM30AQ9NZY2 134 aa9.63□□□□□ -0.87
COL6A1-201ENST00000361866 UNC79Q9P2D8 2635 aa9.63□□□□□ -0.87
COL6A1-201ENST00000361866 OXLD1Q5BKU9 147 aa9.62□□□□□ -0.87
COL6A1-201ENST00000361866 RETNQ9HD89 108 aa9.62□□□□□ -0.87
COL6A1-201ENST00000361866 WFDC13Q8IUB5 93 aa9.62□□□□□ -0.87
COL6A1-201ENST00000361866 WFDC10BQ8IUB3 73 aa9.61□□□□□ -0.87
COL6A1-201ENST00000361866 MUC7Q8TAX7 377 aa9.61□□□□□ -0.87
COL6A1-201ENST00000361866 IGHV4-30-4P0DP06 118 aa9.61□□□□□ -0.87
COL6A1-201ENST00000361866 H0Y9J4 135 aa9.59□□□□□ -0.87
COL6A1-201ENST00000361866 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.58□□□□□ -0.88
COL6A1-201ENST00000361866 ZANQ9Y493 2812 aa9.58□□□□□ -0.88
COL6A1-201ENST00000361866 LINC01561Q8N1V8 128 aa9.58□□□□□ -0.88
COL6A1-201ENST00000361866 ATP5EP56381 51 aaPredicted RBP9.57□□□□□ -0.88
COL6A1-201ENST00000361866 SEC61GP60059 68 aa9.57□□□□□ -0.88
COL6A1-201ENST00000361866 UBE2AP49459 152 aa9.56□□□□□ -0.88
COL6A1-201ENST00000361866 NANOS2P60321 138 aaKnown RBP9.56□□□□□ -0.88
COL6A1-201ENST00000361866 RELNP78509 3460 aa9.56□□□□□ -0.88
COL6A1-201ENST00000361866 UBR5O95071 2799 aaPredicted RBP9.56□□□□□ -0.88
COL6A1-201ENST00000361866 A0A0J9YWU9 116 aa9.56□□□□□ -0.88
COL6A1-201ENST00000361866 FAM104AQ969W3 186 aa9.56□□□□□ -0.88
COL6A1-201ENST00000361866 Q6ZTC4 211 aa9.56□□□□□ -0.88
COL6A1-201ENST00000361866 SPATA3Q8NHX4 192 aa9.56□□□□□ -0.88
COL6A1-201ENST00000361866 EGFEM1PQ0D2K5 195 aa9.55□□□□□ -0.88
COL6A1-201ENST00000361866 Q6ZRU5 148 aa9.55□□□□□ -0.88
COL6A1-201ENST00000361866 TRBV7-6A0A0J9YX20 115 aa9.55□□□□□ -0.88
COL6A1-201ENST00000361866 TMEM254Q8TBM7 123 aa9.55□□□□□ -0.88
COL6A1-201ENST00000361866 TRAV10A0A0B4J240 114 aa9.54□□□□□ -0.88
COL6A1-201ENST00000361866 DEFB116Q30KQ4 102 aa9.54□□□□□ -0.88
COL6A1-201ENST00000361866 PMAIP1Q13794 54 aa9.53□□□□□ -0.88
COL6A1-201ENST00000361866 PSPHP1O15172 72 aa9.53□□□□□ -0.88
COL6A1-201ENST00000361866 C1orf137Q5JT78 98 aa9.53□□□□□ -0.88
COL6A1-201ENST00000361866 TEP1Q99973 2627 aaKnown RBP9.52□□□□□ -0.89
COL6A1-201ENST00000361866 NDUFB1O75438 58 aa9.52□□□□□ -0.89
COL6A1-201ENST00000361866 LYPD5Q6UWN5 251 aa9.51□□□□□ -0.89
COL6A1-201ENST00000361866 C6orf48Q9UBA6 75 aa9.51□□□□□ -0.89
COL6A1-201ENST00000361866 X6R8D5 127 aa9.51□□□□□ -0.89
COL6A1-201ENST00000361866 Q6ZQT0 140 aa9.51□□□□□ -0.89
COL6A1-201ENST00000361866 GIG44P09565 113 aaPredicted RBP9.5□□□□□ -0.89
COL6A1-201ENST00000361866 IGSF10Q6WRI0 2623 aa9.5□□□□□ -0.89
COL6A1-201ENST00000361866 NOTCH1P46531 2555 aa9.49□□□□□ -0.89
COL6A1-201ENST00000361866 TM2D3Q9BRN9 247 aa9.49□□□□□ -0.89
COL6A1-201ENST00000361866 CHKB-CPT1BH3BT56 60 aa9.48□□□□□ -0.89
COL6A1-201ENST00000361866 PRYO14603 147 aa9.48□□□□□ -0.89
COL6A1-201ENST00000361866 DHRS4-AS1Q9P1J3 65 aa9.48□□□□□ -0.89
COL6A1-201ENST00000361866 FSHBP01225 129 aa9.48□□□□□ -0.89
COL6A1-201ENST00000361866 C16orf95Q9H693 158 aa9.46□□□□□ -0.89
COL6A1-201ENST00000361866 A6NED7 52 aa9.46□□□□□ -0.89
COL6A1-201ENST00000361866 SETXQ7Z333 2677 aaKnown RBP9.46□□□□□ -0.9
COL6A1-201ENST00000361866 PLAC8L1A1L4L8 177 aa9.46□□□□□ -0.9
COL6A1-201ENST00000361866 LINC00336Q6ZUF6 198 aa9.46□□□□□ -0.9
COL6A1-201ENST00000361866 CXCL6P80162 114 aa9.45□□□□□ -0.9
COL6A1-201ENST00000361866 LINC00208Q96KT6 92 aa9.45□□□□□ -0.9
COL6A1-201ENST00000361866 UTP20O75691 2785 aaKnown RBP9.44□□□□□ -0.9
COL6A1-201ENST00000361866 KIAA0087Q14695 138 aa9.44□□□□□ -0.9
COL6A1-201ENST00000361866 CSNK1G2-AS1Q8NCQ2 148 aa9.44□□□□□ -0.9
COL6A1-201ENST00000361866 NBEAL1Q6ZS30 2694 aa9.43□□□□□ -0.9
COL6A1-201ENST00000361866 ESRGQ1W209 222 aa9.43□□□□□ -0.9
COL6A1-201ENST00000361866 IGKV4-1P06312 121 aa9.42□□□□□ -0.9
COL6A1-201ENST00000361866 A0A096LNT2 108 aa9.42□□□□□ -0.9
COL6A1-201ENST00000361866 CSMD1Q96PZ7 3565 aa9.42□□□□□ -0.9
COL6A1-201ENST00000361866 NF1P21359 2839 aa9.42□□□□□ -0.9
COL6A1-201ENST00000361866 A0A087WSZ3 146 aa9.42□□□□□ -0.9
COL6A1-201ENST00000361866 SMIM29Q86T20 159 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms