RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 SLIT1O75093 1534 aa-0.09□□□□□ -2.42
RPL39-201ENST00000361575 ARMS2P0C7Q2 107 aa-0.1□□□□□ -2.43
RPL39-201ENST00000361575 FAUP35544 74 aaKnown RBP-0.1□□□□□ -2.43
RPL39-201ENST00000361575 CUX1P39880 1505 aa-0.1□□□□□ -2.43
RPL39-201ENST00000361575 CRYBG1Q9Y4K1 1723 aa-0.1□□□□□ -2.43
RPL39-201ENST00000361575 ALMS1Q8TCU4 4167 aa-0.1□□□□□ -2.43
RPL39-201ENST00000361575 WNK1Q9H4A3 2382 aa-0.11□□□□□ -2.43
RPL39-201ENST00000361575 HECTD4Q9Y4D8 3996 aa-0.12□□□□□ -2.43
RPL39-201ENST00000361575 REV3LO60673 3130 aa-0.12□□□□□ -2.43
RPL39-201ENST00000361575 PKIAP61925 76 aa-0.12□□□□□ -2.43
RPL39-201ENST00000361575 PSENENQ9NZ42 101 aa-0.12□□□□□ -2.43
RPL39-201ENST00000361575 CRIPTQ9P021 101 aa-0.12□□□□□ -2.43
RPL39-201ENST00000361575 EP300Q09472 2414 aaPredicted RBP-0.12□□□□□ -2.43
RPL39-201ENST00000361575 COL6A3P12111 3177 aa-0.12□□□□□ -2.43
RPL39-201ENST00000361575 PKD1L3Q7Z443 1732 aa-0.13□□□□□ -2.43
RPL39-201ENST00000361575 LRP2P98164 4655 aa-0.13□□□□□ -2.43
RPL39-201ENST00000361575 SAMD9Q5K651 1589 aa-0.13□□□□□ -2.43
RPL39-201ENST00000361575 NKTRP30414 1462 aaKnown RBP-0.13□□□□□ -2.43
RPL39-201ENST00000361575 UQCRHLA0A096LP55 91 aa-0.13□□□□□ -2.43
RPL39-201ENST00000361575 LOC730098B7Z3J9 87 aa-0.13□□□□□ -2.43
RPL39-201ENST00000361575 GNGT1P63211 74 aa-0.13□□□□□ -2.43
RPL39-201ENST00000361575 DEFB105AQ8NG35 78 aa-0.13□□□□□ -2.43
RPL39-201ENST00000361575 KLK9Q2XQG4 91 aa-0.14□□□□□ -2.43
RPL39-201ENST00000361575 ZNF720Q7Z2F6 126 aa-0.14□□□□□ -2.43
RPL39-201ENST00000361575 FLNBO75369 2602 aaKnown RBP-0.15□□□□□ -2.43
RPL39-201ENST00000361575 ATP10BO94823 1461 aa-0.15□□□□□ -2.43
RPL39-201ENST00000361575 CCNB3Q8WWL7 1395 aa-0.15□□□□□ -2.43
RPL39-201ENST00000361575 ETDBQ3ZM63 59 aa-0.15□□□□□ -2.43
RPL39-201ENST00000361575 BCORQ6W2J9 1755 aa-0.15□□□□□ -2.43
RPL39-201ENST00000361575 UBR1Q8IWV7 1749 aa-0.16□□□□□ -2.43
RPL39-201ENST00000361575 DSTQ03001 7570 aaKnown RBP-0.16□□□□□ -2.43
RPL39-201ENST00000361575 F8WEM9 126 aa-0.16□□□□□ -2.44
RPL39-201ENST00000361575 GYPAP02724 150 aa-0.16□□□□□ -2.44
RPL39-201ENST00000361575 KRTAP6-1Q3LI64 71 aa-0.16□□□□□ -2.44
RPL39-201ENST00000361575 HIGD1BQ9P298 99 aa-0.16□□□□□ -2.44
RPL39-201ENST00000361575 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.16□□□□□ -2.44
RPL39-201ENST00000361575 RGPD4Q7Z3J3 1758 aa-0.17□□□□□ -2.44
RPL39-201ENST00000361575 RGPD3A6NKT7 1758 aaPredicted RBP-0.17□□□□□ -2.44
RPL39-201ENST00000361575 APC2O95996 2303 aa-0.18□□□□□ -2.44
RPL39-201ENST00000361575 QSER1Q2KHR3 1735 aa-0.18□□□□□ -2.44
RPL39-201ENST00000361575 CPSF4LA6NMK7 179 aaKnown RBP-0.18□□□□□ -2.44
RPL39-201ENST00000361575 I3L3M4 83 aa-0.18□□□□□ -2.44
RPL39-201ENST00000361575 MYO3AQ8NEV4 1616 aa-0.18□□□□□ -2.44
RPL39-201ENST00000361575 ALKQ9UM73 1620 aa-0.18□□□□□ -2.44
RPL39-201ENST00000361575 D6R8Y8 96 aa-0.19□□□□□ -2.44
RPL39-201ENST00000361575 MUSTN1Q8IVN3 82 aa-0.19□□□□□ -2.44
RPL39-201ENST00000361575 APLNQ9ULZ1 77 aa-0.19□□□□□ -2.44
RPL39-201ENST00000361575 SUPT6HQ7KZ85 1726 aaKnown RBP-0.19□□□□□ -2.44
RPL39-201ENST00000361575 STAB1Q9NY15 2570 aa-0.19□□□□□ -2.44
RPL39-201ENST00000361575 C4AP0C0L4 1744 aa-0.2□□□□□ -2.44
RPL39-201ENST00000361575 C4BP0C0L5 1744 aa-0.2□□□□□ -2.44
RPL39-201ENST00000361575 LEPROTL1O95214 131 aa-0.2□□□□□ -2.44
RPL39-201ENST00000361575 SPRR2BP35325 72 aa-0.2□□□□□ -2.44
RPL39-201ENST00000361575 C20orf78Q9BR46 151 aa-0.2□□□□□ -2.44
RPL39-201ENST00000361575 TRANK1O15050 2925 aa-0.2□□□□□ -2.44
RPL39-201ENST00000361575 CEP162Q5TB80 1403 aa-0.21□□□□□ -2.44
RPL39-201ENST00000361575 TTC37Q6PGP7 1564 aa-0.21□□□□□ -2.44
RPL39-201ENST00000361575 PDZD2O15018 2839 aa-0.22□□□□□ -2.44
RPL39-201ENST00000361575 UBR3Q6ZT12 1888 aa-0.22□□□□□ -2.44
RPL39-201ENST00000361575 SMIM11AP58511 58 aa-0.22□□□□□ -2.44
RPL39-201ENST00000361575 UBE2D4Q9Y2X8 147 aa-0.22□□□□□ -2.44
RPL39-201ENST00000361575 LRP1BQ9NZR2 4599 aa-0.22□□□□□ -2.44
RPL39-201ENST00000361575 RGPD1P0DJD0 1748 aa-0.22□□□□□ -2.44
RPL39-201ENST00000361575 TIAM2Q8IVF5 1701 aa-0.22□□□□□ -2.44
RPL39-201ENST00000361575 ACANP16112 2415 aa-0.23□□□□□ -2.45
RPL39-201ENST00000361575 SCN11AQ9UI33 1791 aa-0.23□□□□□ -2.45
RPL39-201ENST00000361575 M0R2T5 61 aa-0.23□□□□□ -2.45
RPL39-201ENST00000361575 CCL22O00626 93 aa-0.23□□□□□ -2.45
RPL39-201ENST00000361575 KRTAP19-7Q3SYF9 63 aa-0.23□□□□□ -2.45
RPL39-201ENST00000361575 MUC12Q9UKN1 5478 aa-0.23□□□□□ -2.45
RPL39-201ENST00000361575 CLIP1P30622 1438 aa-0.23□□□□□ -2.45
RPL39-201ENST00000361575 POLR1AO95602 1720 aaPredicted RBP-0.24□□□□□ -2.45
RPL39-201ENST00000361575 LTN1O94822 1766 aa-0.24□□□□□ -2.45
RPL39-201ENST00000361575 MUC2Q02817 5179 aa-0.24□□□□□ -2.45
RPL39-201ENST00000361575 SPTY2D1-AS1A0A0U1RR47 76 aa-0.24□□□□□ -2.45
RPL39-201ENST00000361575 IGLC2P0DOY2 106 aa-0.24□□□□□ -2.45
RPL39-201ENST00000361575 IGLC3P0DOY3 106 aa-0.24□□□□□ -2.45
RPL39-201ENST00000361575 H1FX-AS1Q4G0G2 97 aa-0.24□□□□□ -2.45
RPL39-201ENST00000361575 MRPL34Q9BQ48 92 aaKnown RBP-0.24□□□□□ -2.45
RPL39-201ENST00000361575 SVEP1Q4LDE5 3571 aa-0.24□□□□□ -2.45
RPL39-201ENST00000361575 PREX1Q8TCU6 1659 aa-0.24□□□□□ -2.45
RPL39-201ENST00000361575 HMGN2P05204 90 aaKnown RBP-0.25□□□□□ -2.45
RPL39-201ENST00000361575 PYY3Q5JQD4 70 aa-0.25□□□□□ -2.45
RPL39-201ENST00000361575 ABCC3O15438 1527 aa-0.25□□□□□ -2.45
RPL39-201ENST00000361575 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.25□□□□□ -2.45
RPL39-201ENST00000361575 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.25□□□□□ -2.45
RPL39-201ENST00000361575 LELP1Q5T871 98 aa-0.26□□□□□ -2.45
RPL39-201ENST00000361575 FLGP20930 4061 aaPredicted RBP-0.27□□□□□ -2.45
RPL39-201ENST00000361575 STAB2Q8WWQ8 2551 aa-0.27□□□□□ -2.45
RPL39-201ENST00000361575 DEFB135Q30KP9 77 aa-0.27□□□□□ -2.45
RPL39-201ENST00000361575 NMSQ5H8A3 153 aa-0.27□□□□□ -2.45
RPL39-201ENST00000361575 HEPN1Q6WQI6 88 aa-0.27□□□□□ -2.45
RPL39-201ENST00000361575 NBEAL1Q6ZS30 2694 aa-0.27□□□□□ -2.45
RPL39-201ENST00000361575 PPLO60437 1756 aa-0.27□□□□□ -2.45
RPL39-201ENST00000361575 MAGI2Q86UL8 1455 aa-0.28□□□□□ -2.45
RPL39-201ENST00000361575 PEA15Q15121 130 aa-0.28□□□□□ -2.45
RPL39-201ENST00000361575 DEFB112Q30KQ8 113 aa-0.28□□□□□ -2.45
RPL39-201ENST00000361575 V9GYS6 101 aa-0.28□□□□□ -2.45
RPL39-201ENST00000361575 TMEM131LA2VDJ0 1609 aa-0.28□□□□□ -2.45
RPL39-201ENST00000361575 LRRC7Q96NW7 1537 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms