RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 CKS1BP61024 79 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 ARL17AQ8IVW1 177 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 IGKV2-24A0A0C4DH68 120 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 C9orf118A6NHY6 69 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 TMEM238C9JI98 176 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 KRTAP11-1Q8IUC1 163 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 LCE6AA0A183 80 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 TRIAP1O43715 76 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 RPL18AQ02543 176 aaKnown RBP1.85□□□□□ -2.11
LTN1-201ENST00000361371 SYCNQ0VAF6 134 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 C9orf129Q5T035 196 aaKnown RBP1.85□□□□□ -2.11
LTN1-201ENST00000361371 SERTAD4-AS1Q5TG53 156 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 SPCS1Q9Y6A9 102 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 UPK3BQ9BT76 320 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 CMYA5Q8N3K9 4069 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 ZNF561-AS1K7EIQ3 104 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 TNP2Q05952 138 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 SPANXDQ9BXN6 97 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 SPANXCQ9NY87 97 aa1.85□□□□□ -2.11
LTN1-201ENST00000361371 TRAV8-4A0A0B4J246 113 aa1.84□□□□□ -2.11
LTN1-201ENST00000361371 A0A1W2PPM0 123 aa1.84□□□□□ -2.11
LTN1-201ENST00000361371 GAGE2BQ13066 116 aa1.84□□□□□ -2.11
LTN1-201ENST00000361371 Q6ZR54 194 aa1.84□□□□□ -2.11
LTN1-201ENST00000361371 PRO1854Q9UHT4 67 aa1.84□□□□□ -2.11
LTN1-201ENST00000361371 RPL13AP40429 203 aaKnown RBP1.84□□□□□ -2.11
LTN1-201ENST00000361371 OR13C6PQ8NH95 151 aa1.84□□□□□ -2.11
LTN1-201ENST00000361371 TCL1BO95988 128 aa1.84□□□□□ -2.11
LTN1-201ENST00000361371 Q1RN00 199 aa1.84□□□□□ -2.11
LTN1-201ENST00000361371 SMAGPQ0VAQ4 97 aa1.84□□□□□ -2.12
LTN1-201ENST00000361371 A0A1W2PNN7 141 aa1.84□□□□□ -2.12
LTN1-201ENST00000361371 WWC2-AS2Q96NR7 200 aa1.84□□□□□ -2.12
LTN1-201ENST00000361371 SRRM2Q9UQ35 2752 aaKnown RBP1.84□□□□□ -2.12
LTN1-201ENST00000361371 CSMD3Q7Z407 3707 aa1.84□□□□□ -2.12
LTN1-201ENST00000361371 DNAH17Q9UFH2 4485 aa1.84□□□□□ -2.12
LTN1-201ENST00000361371 NUPR2A6NF83 97 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 KRTAP10-2P60368 255 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 UBE2V1Q13404 147 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 ETDBQ3ZM63 59 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 PRO0461Q9UI25 63 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 A0A096LNI7 61 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 GVQW2A0A096LPI5 108 aaPredicted RBP1.83□□□□□ -2.12
LTN1-201ENST00000361371 RTL8CO15255 209 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 VPREB1P12018 145 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 HERV-K104P63124 156 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 SMIM11BQ8TCY0 68 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 LINC00476Q8WZB0 136 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 TRBV10-3A0A0K0K1G6 114 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 RPL37AP8A6NKH3 93 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 K7EP34 96 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 TIMM17BO60830 172 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.83□□□□□ -2.12
LTN1-201ENST00000361371 A0A0B4J2C4 111 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 A0A1B0GV72 72 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 RPL24P83731 157 aaKnown RBP1.83□□□□□ -2.12
LTN1-201ENST00000361371 C6orf99Q4VX62 202 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 C22orf24Q9Y442 160 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 PSCAO43653 123 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 IFITM1P13164 125 aa1.83□□□□□ -2.12
LTN1-201ENST00000361371 FAM19A5Q7Z5A7 132 aaPredicted RBP1.83□□□□□ -2.12
LTN1-201ENST00000361371 BIRC6Q9NR09 4857 aa1.82□□□□□ -2.12
LTN1-201ENST00000361371 A0A087WYN8 130 aa1.82□□□□□ -2.12
LTN1-201ENST00000361371 PSMB2P49721 201 aa1.82□□□□□ -2.12
LTN1-201ENST00000361371 RPS28P62857 69 aaKnown RBP1.82□□□□□ -2.12
LTN1-201ENST00000361371 CIRBPQ14011 172 aaKnown RBP1.82□□□□□ -2.12
LTN1-201ENST00000361371 C7orf33Q8WU49 177 aa1.82□□□□□ -2.12
LTN1-201ENST00000361371 FAM30AQ9NZY2 134 aa1.82□□□□□ -2.12
LTN1-201ENST00000361371 DYNC2H1Q8NCM8 4307 aaKnown RBP1.82□□□□□ -2.12
LTN1-201ENST00000361371 A0A087WTM6 91 aa1.82□□□□□ -2.12
LTN1-201ENST00000361371 SCGB1C2P0DMR2 95 aa1.82□□□□□ -2.12
LTN1-201ENST00000361371 FABP2P12104 132 aa1.82□□□□□ -2.12
LTN1-201ENST00000361371 NDUFC2-KCTD14E9PQ53 114 aa1.82□□□□□ -2.12
LTN1-201ENST00000361371 LINC01561Q8N1V8 128 aa1.82□□□□□ -2.12
LTN1-201ENST00000361371 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.82□□□□□ -2.12
LTN1-201ENST00000361371 CARD19Q96LW7 228 aa1.82□□□□□ -2.12
LTN1-201ENST00000361371 C9JAW5 83 aa1.81□□□□□ -2.12
LTN1-201ENST00000361371 C2orf48Q96LS8 159 aa1.81□□□□□ -2.12
LTN1-201ENST00000361371 A0A0G2JQZ4 141 aa1.81□□□□□ -2.12
LTN1-201ENST00000361371 LINC00167Q96N53 147 aa1.81□□□□□ -2.12
LTN1-201ENST00000361371 CXCL5P42830 114 aa1.81□□□□□ -2.12
LTN1-201ENST00000361371 TRBV30A0A0K0K1B3 111 aa1.81□□□□□ -2.12
LTN1-201ENST00000361371 ERC2-IT1O76042 136 aa1.81□□□□□ -2.12
LTN1-201ENST00000361371 HIST1H4AP62805 103 aaKnown RBP1.81□□□□□ -2.12
LTN1-201ENST00000361371 Q6Q795 121 aa1.81□□□□□ -2.12
LTN1-201ENST00000361371 C9orf163Q8N9P6 203 aa1.81□□□□□ -2.12
LTN1-201ENST00000361371 C1orf134Q5TEV5 83 aa1.8□□□□□ -2.12
LTN1-201ENST00000361371 ST20-AS1Q8NBB2 130 aa1.8□□□□□ -2.12
LTN1-201ENST00000361371 LST1O00453 97 aa1.8□□□□□ -2.12
LTN1-201ENST00000361371 RPL28P46779 137 aaKnown RBP1.8□□□□□ -2.12
LTN1-201ENST00000361371 C3orf22Q8N5N4 141 aa1.8□□□□□ -2.12
LTN1-201ENST00000361371 DNAH8Q96JB1 4490 aa1.8□□□□□ -2.12
LTN1-201ENST00000361371 KRTAP10-1P60331 282 aa1.8□□□□□ -2.12
LTN1-201ENST00000361371 S100A7L2Q5SY68 101 aa1.8□□□□□ -2.12
LTN1-201ENST00000361371 Q8N814 137 aa1.79□□□□□ -2.12
LTN1-201ENST00000361371 SLC25A20O43772 301 aa1.79□□□□□ -2.12
LTN1-201ENST00000361371 Q6ZQY7 126 aa1.79□□□□□ -2.12
LTN1-201ENST00000361371 ANKRD29Q8N6D5 301 aa1.79□□□□□ -2.12
LTN1-201ENST00000361371 HERC2O95714 4834 aa1.79□□□□□ -2.12
LTN1-201ENST00000361371 M0R378 163 aa1.79□□□□□ -2.12
LTN1-201ENST00000361371 NDUFC2O95298 119 aa1.79□□□□□ -2.12
LTN1-201ENST00000361371 IGLV6-57P01721 117 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms