RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 PTPRSQ13332 1948 aa13.16□□□□□ -0.3
BRPF3-202ENST00000357641 PLA2G1BP04054 148 aaKnown RBP13.15□□□□□ -0.3
BRPF3-202ENST00000357641 Q6ZRX8 168 aa13.15□□□□□ -0.3
BRPF3-202ENST00000357641 K7EQZ3 153 aa13.14□□□□□ -0.31
BRPF3-202ENST00000357641 PTPN13Q12923 2485 aa13.13□□□□□ -0.31
BRPF3-202ENST00000357641 KTN1-AS1Q86SY8 53 aa13.13□□□□□ -0.31
BRPF3-202ENST00000357641 SPACA4Q8TDM5 124 aa13.13□□□□□ -0.31
BRPF3-202ENST00000357641 LINC01600Q96MT4 127 aa13.12□□□□□ -0.31
BRPF3-202ENST00000357641 SMR3AQ99954 134 aa13.12□□□□□ -0.31
BRPF3-202ENST00000357641 KLKP1Q107X0 134 aa13.11□□□□□ -0.31
BRPF3-202ENST00000357641 LOC101927531A0A1B0GV80 90 aa13.11□□□□□ -0.31
BRPF3-202ENST00000357641 H7BZZ5 65 aa13.09□□□□□ -0.31
BRPF3-202ENST00000357641 TET2Q6N021 2002 aaPredicted RBP13.08□□□□□ -0.32
BRPF3-202ENST00000357641 A0A1W2PPR1 153 aa13.08□□□□□ -0.32
BRPF3-202ENST00000357641 UQCR11O14957 56 aa13.06□□□□□ -0.32
BRPF3-202ENST00000357641 C16orf95Q9H693 158 aa13.06□□□□□ -0.32
BRPF3-202ENST00000357641 LINC00313P59037 77 aa13.06□□□□□ -0.32
BRPF3-202ENST00000357641 LCA10Q71F78 164 aa13.05□□□□□ -0.32
BRPF3-202ENST00000357641 ADAMTS20P59510 1910 aa13.04□□□□□ -0.32
BRPF3-202ENST00000357641 KRTAP10-9P60411 292 aa13.04□□□□□ -0.32
BRPF3-202ENST00000357641 PHF5AQ7RTV0 110 aaKnown RBP13.04□□□□□ -0.32
BRPF3-202ENST00000357641 SONP18583 2426 aaKnown RBP13.03□□□□□ -0.32
BRPF3-202ENST00000357641 A8MWP4 228 aa13.03□□□□□ -0.32
BRPF3-202ENST00000357641 MIR22HGQ0VDD5 57 aa13.02□□□□□ -0.32
BRPF3-202ENST00000357641 EPM2AB3EWF7 344 aa13.02□□□□□ -0.33
BRPF3-202ENST00000357641 EIF4EBP3O60516 100 aaPredicted RBP13.01□□□□□ -0.33
BRPF3-202ENST00000357641 ACACBO00763 2458 aa13□□□□□ -0.33
BRPF3-202ENST00000357641 IGLV6-57P01721 117 aa13□□□□□ -0.33
BRPF3-202ENST00000357641 HIVEP3Q5T1R4 2406 aa13□□□□□ -0.33
BRPF3-202ENST00000357641 C1orf134Q5TEV5 83 aa13□□□□□ -0.33
BRPF3-202ENST00000357641 MUC4Q99102 2169 aa12.99□□□□□ -0.33
BRPF3-202ENST00000357641 C10orf142B7Z368 130 aa12.98□□□□□ -0.33
BRPF3-202ENST00000357641 CHTF8P0CG12 524 aa12.95□□□□□ -0.34
BRPF3-202ENST00000357641 MRPL34Q9BQ48 92 aaKnown RBP12.95□□□□□ -0.34
BRPF3-202ENST00000357641 Q6ZRP5 223 aa12.92□□□□□ -0.34
BRPF3-202ENST00000357641 PRR15Q8IV56 129 aa12.91□□□□□ -0.34
BRPF3-202ENST00000357641 BDP1A6H8Y1 2624 aa12.9□□□□□ -0.35
BRPF3-202ENST00000357641 FAM168BA1KXE4 195 aa12.89□□□□□ -0.35
BRPF3-202ENST00000357641 NOTCH2Q04721 2471 aa12.89□□□□□ -0.35
BRPF3-202ENST00000357641 Q96NJ1 140 aa12.89□□□□□ -0.35
BRPF3-202ENST00000357641 CRIPTQ9P021 101 aa12.89□□□□□ -0.35
BRPF3-202ENST00000357641 MUC6Q6W4X9 2439 aa12.88□□□□□ -0.35
BRPF3-202ENST00000357641 GVQW2A0A096LPI5 108 aaPredicted RBP12.88□□□□□ -0.35
BRPF3-202ENST00000357641 APLNQ9ULZ1 77 aa12.87□□□□□ -0.35
BRPF3-202ENST00000357641 FAM229AH3BQW9 127 aa12.86□□□□□ -0.35
BRPF3-202ENST00000357641 CACNA1AO00555 2505 aa12.86□□□□□ -0.35
BRPF3-202ENST00000357641 C9orf129Q5T035 196 aaKnown RBP12.86□□□□□ -0.35
BRPF3-202ENST00000357641 PTPRBP23467 1997 aa12.85□□□□□ -0.35
BRPF3-202ENST00000357641 C16orf90A8MZG2 172 aa12.84□□□□□ -0.35
BRPF3-202ENST00000357641 WIPF1O43516 503 aa12.84□□□□□ -0.35
BRPF3-202ENST00000357641 IGFL1Q6UW32 110 aa12.84□□□□□ -0.35
BRPF3-202ENST00000357641 CUL9Q8IWT3 2517 aa12.83□□□□□ -0.36
BRPF3-202ENST00000357641 LINC00528Q8N1L1 170 aa12.82□□□□□ -0.36
BRPF3-202ENST00000357641 CDC42SE1Q9NRR8 79 aa12.81□□□□□ -0.36
BRPF3-202ENST00000357641 C8orf17Q9NRJ1 99 aa12.8□□□□□ -0.36
BRPF3-202ENST00000357641 NAV2Q8IVL1 2488 aa12.8□□□□□ -0.36
BRPF3-202ENST00000357641 IGLV1-50A0A075B6I6 118 aa12.79□□□□□ -0.36
BRPF3-202ENST00000357641 A0A0G2JQZ4 141 aa12.78□□□□□ -0.36
BRPF3-202ENST00000357641 A0A1W2PNN7 141 aa12.78□□□□□ -0.36
BRPF3-202ENST00000357641 H3BNG1 76 aa12.78□□□□□ -0.36
BRPF3-202ENST00000357641 KCNQ1DNQ9H478 68 aa12.77□□□□□ -0.37
BRPF3-202ENST00000357641 DSCR10P59022 87 aa12.76□□□□□ -0.37
BRPF3-202ENST00000357641 Q8N377 158 aa12.75□□□□□ -0.37
BRPF3-202ENST00000357641 TYMSOSQ8TAI1 123 aa12.75□□□□□ -0.37
BRPF3-202ENST00000357641 ABCA2Q9BZC7 2435 aa12.75□□□□□ -0.37
BRPF3-202ENST00000357641 MYO18BQ8IUG5 2567 aa12.72□□□□□ -0.37
BRPF3-202ENST00000357641 RBM12B-AS1Q9P1G2 102 aa12.71□□□□□ -0.37
BRPF3-202ENST00000357641 DOPEY1Q5JWR5 2465 aa12.71□□□□□ -0.37
BRPF3-202ENST00000357641 RTL8CO15255 209 aa12.71□□□□□ -0.37
BRPF3-202ENST00000357641 A0A1B0GVX0 72 aa12.69□□□□□ -0.38
BRPF3-202ENST00000357641 LINC00588Q9Y4M8 146 aa12.69□□□□□ -0.38
BRPF3-202ENST00000357641 Q1T7F1 81 aa12.69□□□□□ -0.38
BRPF3-202ENST00000357641 SPANXA2-OT1Q8N9U9 137 aa12.67□□□□□ -0.38
BRPF3-202ENST00000357641 Q8NAQ8 132 aa12.67□□□□□ -0.38
BRPF3-202ENST00000357641 CCDC168Q8NDH2 2452 aa12.66□□□□□ -0.38
BRPF3-202ENST00000357641 OBSCN-AS1Q96MR7 158 aa12.65□□□□□ -0.39
BRPF3-202ENST00000357641 H3BS24 57 aa12.64□□□□□ -0.39
BRPF3-202ENST00000357641 PRO3102Q9H379 93 aa12.64□□□□□ -0.39
BRPF3-202ENST00000357641 PIEZO2Q9H5I5 2752 aa12.64□□□□□ -0.39
BRPF3-202ENST00000357641 SRCAPQ6ZRS2 3230 aa12.63□□□□□ -0.39
BRPF3-202ENST00000357641 MYO9AB2RTY4 2548 aa12.63□□□□□ -0.39
BRPF3-202ENST00000357641 COL27A1Q8IZC6 1860 aaPredicted RBP12.63□□□□□ -0.39
BRPF3-202ENST00000357641 Q5XG85 94 aa12.62□□□□□ -0.39
BRPF3-202ENST00000357641 TTC28Q96AY4 2481 aa12.6□□□□□ -0.39
BRPF3-202ENST00000357641 NBDYA0A0U1RRE5 68 aa12.58□□□□□ -0.4
BRPF3-202ENST00000357641 KLK9Q2XQG4 91 aa12.58□□□□□ -0.4
BRPF3-202ENST00000357641 A0A0D9SG42 100 aa12.57□□□□□ -0.4
BRPF3-202ENST00000357641 A0A1W2PNM2 257 aa12.57□□□□□ -0.4
BRPF3-202ENST00000357641 FN1P02751 2386 aaKnown RBP12.57□□□□□ -0.4
BRPF3-202ENST00000357641 C15orf56Q8N910 161 aa12.56□□□□□ -0.4
BRPF3-202ENST00000357641 FAM104AQ969W3 186 aa12.56□□□□□ -0.4
BRPF3-202ENST00000357641 DNAH10OSP0CZ25 163 aa12.56□□□□□ -0.4
BRPF3-202ENST00000357641 ZNF462Q96JM2 2506 aa12.56□□□□□ -0.4
BRPF3-202ENST00000357641 OCR1Q9BZK8 76 aa12.55□□□□□ -0.4
BRPF3-202ENST00000357641 FAM229BQ4G0N7 80 aa12.54□□□□□ -0.4
BRPF3-202ENST00000357641 PRR26Q8N8Z3 221 aa12.5□□□□□ -0.41
BRPF3-202ENST00000357641 C9orf163Q8N9P6 203 aa12.5□□□□□ -0.41
BRPF3-202ENST00000357641 LINC01554Q52M75 96 aa12.49□□□□□ -0.41
BRPF3-202ENST00000357641 CSNK1G2-AS1Q8NCQ2 148 aa12.49□□□□□ -0.41
BRPF3-202ENST00000357641 PRR34Q9NV39 138 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms