RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 LST1O00453 97 aa3.53□□□□□ -1.84
PRPF4B-201ENST00000337659 TRACP01848 142 aa3.53□□□□□ -1.84
PRPF4B-201ENST00000337659 TMEM126AQ9H061 195 aa3.53□□□□□ -1.84
PRPF4B-201ENST00000337659 LINC00588Q9Y4M8 146 aa3.53□□□□□ -1.84
PRPF4B-201ENST00000337659 DYNC1H1Q14204 4646 aaKnown RBP3.53□□□□□ -1.84
PRPF4B-201ENST00000337659 COX7A2LO14548 114 aa3.53□□□□□ -1.84
PRPF4B-201ENST00000337659 SPRR1AP35321 89 aa3.53□□□□□ -1.84
PRPF4B-201ENST00000337659 HIST1H4GQ99525 98 aa3.53□□□□□ -1.84
PRPF4B-201ENST00000337659 KRTAP4-16G5E9R7 235 aaPredicted RBP3.53□□□□□ -1.84
PRPF4B-201ENST00000337659 CKS1BP61024 79 aa3.53□□□□□ -1.84
PRPF4B-201ENST00000337659 UBE2BP63146 152 aa3.53□□□□□ -1.84
PRPF4B-201ENST00000337659 GAGE6Q13070 117 aa3.53□□□□□ -1.84
PRPF4B-201ENST00000337659 RETNQ9HD89 108 aa3.53□□□□□ -1.84
PRPF4B-201ENST00000337659 ERG28Q9UKR5 140 aa3.53□□□□□ -1.84
PRPF4B-201ENST00000337659 Q9H8V8 135 aa3.52□□□□□ -1.85
PRPF4B-201ENST00000337659 Q9HAA7 133 aa3.52□□□□□ -1.85
PRPF4B-201ENST00000337659 EPPK1P58107 5090 aaKnown RBP3.52□□□□□ -1.85
PRPF4B-201ENST00000337659 Q6ZR54 194 aa3.52□□□□□ -1.85
PRPF4B-201ENST00000337659 DEFB131BA0A096LNP1 70 aa3.52□□□□□ -1.85
PRPF4B-201ENST00000337659 TRAV13-2A0A0B4J235 113 aa3.52□□□□□ -1.85
PRPF4B-201ENST00000337659 LRCOL1A6NCL2 159 aa3.52□□□□□ -1.85
PRPF4B-201ENST00000337659 H3BQ85 93 aa3.52□□□□□ -1.85
PRPF4B-201ENST00000337659 H3BT86 120 aa3.52□□□□□ -1.85
PRPF4B-201ENST00000337659 GHRHP01286 108 aa3.51□□□□□ -1.85
PRPF4B-201ENST00000337659 SEC61GP60059 68 aa3.51□□□□□ -1.85
PRPF4B-201ENST00000337659 LINC00269Q8N2A0 174 aa3.51□□□□□ -1.85
PRPF4B-201ENST00000337659 Q8NDZ9 215 aa3.51□□□□□ -1.85
PRPF4B-201ENST00000337659 FAM240AA0A1B0GVK7 77 aa3.51□□□□□ -1.85
PRPF4B-201ENST00000337659 CCL18P55774 89 aa3.51□□□□□ -1.85
PRPF4B-201ENST00000337659 TTC32Q5I0X7 151 aa3.51□□□□□ -1.85
PRPF4B-201ENST00000337659 WFDC10BQ8IUB3 73 aa3.51□□□□□ -1.85
PRPF4B-201ENST00000337659 A0A1B0GV72 72 aa3.51□□□□□ -1.85
PRPF4B-201ENST00000337659 APOMO95445 188 aa3.51□□□□□ -1.85
PRPF4B-201ENST00000337659 NUPR2A6NF83 97 aa3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 TRIAP1O43715 76 aa3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 FABP2P12104 132 aa3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 C6orf48Q9UBA6 75 aa3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 K7ERJ3 54 aa3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 LINC00158P58513 81 aa3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 LINC00337Q8N6G1 96 aa3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 NAA38Q9BRA0 125 aaKnown RBP3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 NHP2Q9NX24 153 aaKnown RBP3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 VPREB1P12018 145 aa3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 RNASE13Q5GAN3 156 aaKnown RBP3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 LINC00336Q6ZUF6 198 aa3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 CYSTM1Q9H1C7 97 aa3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 TCL1BO95988 128 aa3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 C6orf226Q5I0X4 101 aa3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 PPDPFLQ8WWR9 84 aa3.5□□□□□ -1.85
PRPF4B-201ENST00000337659 KRTAP7-1Q8IUC3 87 aa3.49□□□□□ -1.85
PRPF4B-201ENST00000337659 Q8N3U1 123 aa3.49□□□□□ -1.85
PRPF4B-201ENST00000337659 H3BUT2 72 aa3.49□□□□□ -1.85
PRPF4B-201ENST00000337659 DEFB104AQ8WTQ1 72 aa3.49□□□□□ -1.85
PRPF4B-201ENST00000337659 SND1-IT1Q9HBX3 110 aa3.49□□□□□ -1.85
PRPF4B-201ENST00000337659 GAGE12HA6NDE8 117 aa3.48□□□□□ -1.85
PRPF4B-201ENST00000337659 SPCS1Q9Y6A9 102 aa3.48□□□□□ -1.85
PRPF4B-201ENST00000337659 TRAV13-1A0A0B4J241 112 aa3.48□□□□□ -1.85
PRPF4B-201ENST00000337659 H0Y9J4 135 aa3.48□□□□□ -1.85
PRPF4B-201ENST00000337659 H0YGX0 51 aa3.48□□□□□ -1.85
PRPF4B-201ENST00000337659 LINC01620Q4KN68 170 aa3.48□□□□□ -1.85
PRPF4B-201ENST00000337659 KCNQ1DNQ9H478 68 aa3.48□□□□□ -1.85
PRPF4B-201ENST00000337659 VPS13BQ7Z7G8 4022 aa3.48□□□□□ -1.85
PRPF4B-201ENST00000337659 IGKV2D-24A0A075B6R9 120 aa3.48□□□□□ -1.85
PRPF4B-201ENST00000337659 NDUFC2-KCTD14E9PQ53 114 aa3.48□□□□□ -1.85
PRPF4B-201ENST00000337659 RMI2Q96E14 147 aa3.48□□□□□ -1.85
PRPF4B-201ENST00000337659 IGLV10-54A0A075B6I4 117 aa3.47□□□□□ -1.85
PRPF4B-201ENST00000337659 SLPIP03973 132 aa3.47□□□□□ -1.85
PRPF4B-201ENST00000337659 ATXN8Q156A1 80 aa3.47□□□□□ -1.85
PRPF4B-201ENST00000337659 LAMTOR3Q9UHA4 124 aa3.47□□□□□ -1.85
PRPF4B-201ENST00000337659 PKIGQ9Y2B9 76 aa3.47□□□□□ -1.85
PRPF4B-201ENST00000337659 LOC107984640A0A0U1RRK4 108 aa3.47□□□□□ -1.85
PRPF4B-201ENST00000337659 NKAPP1Q8N9T2 125 aa3.47□□□□□ -1.85
PRPF4B-201ENST00000337659 KRTAP1-5Q9BYS1 174 aa3.47□□□□□ -1.85
PRPF4B-201ENST00000337659 GAGE10A6NGK3 116 aa3.47□□□□□ -1.85
PRPF4B-201ENST00000337659 MIR7-3HGQ8N6C7 128 aa3.47□□□□□ -1.85
PRPF4B-201ENST00000337659 KMT2AQ03164 3969 aa3.47□□□□□ -1.85
PRPF4B-201ENST00000337659 NDUFS5O43920 106 aa3.46□□□□□ -1.86
PRPF4B-201ENST00000337659 C10orf25Q5T742 122 aa3.46□□□□□ -1.86
PRPF4B-201ENST00000337659 TEN1Q86WV5 123 aa3.46□□□□□ -1.86
PRPF4B-201ENST00000337659 DEFB4AO15263 64 aa3.46□□□□□ -1.86
PRPF4B-201ENST00000337659 OCIAD2Q56VL3 154 aa3.46□□□□□ -1.86
PRPF4B-201ENST00000337659 CASC10Q5T4H9 136 aa3.46□□□□□ -1.86
PRPF4B-201ENST00000337659 KRTAP17-1Q9BYP8 105 aa3.46□□□□□ -1.86
PRPF4B-201ENST00000337659 A0A0U1RQV1 116 aa3.46□□□□□ -1.86
PRPF4B-201ENST00000337659 ANGP03950 147 aaKnown RBP3.46□□□□□ -1.86
PRPF4B-201ENST00000337659 ELOF1P60002 83 aaKnown RBP3.46□□□□□ -1.86
PRPF4B-201ENST00000337659 SPAG11BQ08648 103 aa3.46□□□□□ -1.86
PRPF4B-201ENST00000337659 SMIM20Q8N5G0 67 aa3.46□□□□□ -1.86
PRPF4B-201ENST00000337659 INAFM2P0DMQ5 153 aa3.45□□□□□ -1.86
PRPF4B-201ENST00000337659 C9orf129Q5T035 196 aaKnown RBP3.45□□□□□ -1.86
PRPF4B-201ENST00000337659 KRTAP13-1Q8IUC0 172 aa3.45□□□□□ -1.86
PRPF4B-201ENST00000337659 HYDINQ4G0P3 5121 aa3.45□□□□□ -1.86
PRPF4B-201ENST00000337659 A0A1B0GW54 56 aa3.45□□□□□ -1.86
PRPF4B-201ENST00000337659 SMIM11BQ8TCY0 68 aa3.45□□□□□ -1.86
PRPF4B-201ENST00000337659 IGLV5-48A0A075B6I7 105 aa3.45□□□□□ -1.86
PRPF4B-201ENST00000337659 LOC110117498A0A087WWA1 95 aa3.45□□□□□ -1.86
PRPF4B-201ENST00000337659 UBE2WQ96B02 151 aa3.45□□□□□ -1.86
PRPF4B-201ENST00000337659 LINC00526Q96FQ7 95 aa3.45□□□□□ -1.86
PRPF4B-201ENST00000337659 IGLV8-61A0A075B6I0 122 aa3.44□□□□□ -1.86
PRPF4B-201ENST00000337659 DAND5Q8N907 189 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms