RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 IGKV2D-28P01615 120 aa4.57□□□□□ -1.68
HMG20A-201ENST00000336216 HRCT1Q6UXD1 115 aa4.57□□□□□ -1.68
HMG20A-201ENST00000336216 NTM-AS1Q6ZSK4 140 aa4.57□□□□□ -1.68
HMG20A-201ENST00000336216 SCXQ7RTU7 201 aa4.57□□□□□ -1.68
HMG20A-201ENST00000336216 KMT2BQ9UMN6 2715 aaPredicted RBP4.57□□□□□ -1.68
HMG20A-201ENST00000336216 MIFP14174 115 aa4.56□□□□□ -1.68
HMG20A-201ENST00000336216 A8MTW9 85 aa4.56□□□□□ -1.68
HMG20A-201ENST00000336216 M0R2N4 97 aa4.56□□□□□ -1.68
HMG20A-201ENST00000336216 CSMD3Q7Z407 3707 aa4.56□□□□□ -1.68
HMG20A-201ENST00000336216 C6orf223Q8N319 242 aa4.56□□□□□ -1.68
HMG20A-201ENST00000336216 CSDC2Q9Y534 153 aaKnown RBP4.56□□□□□ -1.68
HMG20A-201ENST00000336216 F8WEM9 126 aa4.56□□□□□ -1.68
HMG20A-201ENST00000336216 ETDCA0A1B0GVM5 59 aa4.55□□□□□ -1.68
HMG20A-201ENST00000336216 STAB2Q8WWQ8 2551 aa4.55□□□□□ -1.68
HMG20A-201ENST00000336216 C5orf47Q569G3 176 aa4.55□□□□□ -1.68
HMG20A-201ENST00000336216 SERP2Q8N6R1 65 aa4.55□□□□□ -1.68
HMG20A-201ENST00000336216 CELA1Q9UNI1 258 aa4.55□□□□□ -1.68
HMG20A-201ENST00000336216 CYSRT1A8MQ03 144 aa4.55□□□□□ -1.68
HMG20A-201ENST00000336216 RBM3P98179 157 aaKnown RBP4.55□□□□□ -1.68
HMG20A-201ENST00000336216 FAM19A1Q7Z5A9 133 aa4.55□□□□□ -1.68
HMG20A-201ENST00000336216 SNURFQ9Y675 71 aa4.55□□□□□ -1.68
HMG20A-201ENST00000336216 HIGD2AQ9BW72 106 aa4.54□□□□□ -1.68
HMG20A-201ENST00000336216 BEAN1Q3B7T3 259 aa4.54□□□□□ -1.68
HMG20A-201ENST00000336216 IBA57-AS1B1ANH7 110 aa4.54□□□□□ -1.68
HMG20A-201ENST00000336216 C9orf129Q5T035 196 aaKnown RBP4.54□□□□□ -1.68
HMG20A-201ENST00000336216 CD164L2Q6UWJ8 174 aa4.54□□□□□ -1.68
HMG20A-201ENST00000336216 UPK3BQ9BT76 320 aa4.54□□□□□ -1.68
HMG20A-201ENST00000336216 A0A096LNT2 108 aa4.53□□□□□ -1.68
HMG20A-201ENST00000336216 RPL37AP8A6NKH3 93 aa4.53□□□□□ -1.68
HMG20A-201ENST00000336216 WFDC10BQ8IUB3 73 aa4.53□□□□□ -1.68
HMG20A-201ENST00000336216 RPL28P46779 137 aaKnown RBP4.53□□□□□ -1.68
HMG20A-201ENST00000336216 DIRC1Q969H9 104 aa4.53□□□□□ -1.68
HMG20A-201ENST00000336216 RMI2Q96E14 147 aa4.53□□□□□ -1.68
HMG20A-201ENST00000336216 KLK9Q2XQG4 91 aa4.52□□□□□ -1.69
HMG20A-201ENST00000336216 Q6ZQY7 126 aa4.52□□□□□ -1.69
HMG20A-201ENST00000336216 IGLV5-39A0A0G2JS06 123 aa4.52□□□□□ -1.69
HMG20A-201ENST00000336216 NDUFC2O95298 119 aa4.52□□□□□ -1.69
HMG20A-201ENST00000336216 V9GYY9 64 aa4.52□□□□□ -1.69
HMG20A-201ENST00000336216 FSHBP01225 129 aa4.51□□□□□ -1.69
HMG20A-201ENST00000336216 C4orf26Q17RF5 130 aa4.51□□□□□ -1.69
HMG20A-201ENST00000336216 LELP1Q5T871 98 aa4.51□□□□□ -1.69
HMG20A-201ENST00000336216 C16orf95Q9H693 158 aa4.51□□□□□ -1.69
HMG20A-201ENST00000336216 FAM104AQ969W3 186 aa4.51□□□□□ -1.69
HMG20A-201ENST00000336216 TENM4Q6N022 2769 aa4.51□□□□□ -1.69
HMG20A-201ENST00000336216 JMJD7-PLA2G4BH0Y9G9 81 aa4.51□□□□□ -1.69
HMG20A-201ENST00000336216 SYCNQ0VAF6 134 aa4.51□□□□□ -1.69
HMG20A-201ENST00000336216 PKIGQ9Y2B9 76 aa4.51□□□□□ -1.69
HMG20A-201ENST00000336216 TMEM258P61165 79 aa4.5□□□□□ -1.69
HMG20A-201ENST00000336216 A0A087WZ39 114 aa4.5□□□□□ -1.69
HMG20A-201ENST00000336216 TMEM256-PLSCR3K7ERE1 68 aa4.5□□□□□ -1.69
HMG20A-201ENST00000336216 Q6JHZ5 121 aa4.5□□□□□ -1.69
HMG20A-201ENST00000336216 MRPL55Q7Z7F7 128 aaKnown RBP4.5□□□□□ -1.69
HMG20A-201ENST00000336216 SPATA3Q8NHX4 192 aa4.5□□□□□ -1.69
HMG20A-201ENST00000336216 A0A0U1RQV1 116 aa4.49□□□□□ -1.69
HMG20A-201ENST00000336216 COX7BP24311 80 aa4.49□□□□□ -1.69
HMG20A-201ENST00000336216 DYNC2H1Q8NCM8 4307 aaKnown RBP4.49□□□□□ -1.69
HMG20A-201ENST00000336216 DNAH7Q8WXX0 4024 aa4.49□□□□□ -1.69
HMG20A-201ENST00000336216 FAM236DA0A1B0GTK5 79 aa4.49□□□□□ -1.69
HMG20A-201ENST00000336216 FAM236CP0DP71 79 aa4.49□□□□□ -1.69
HMG20A-201ENST00000336216 MPLKIPQ8TAP9 179 aa4.49□□□□□ -1.69
HMG20A-201ENST00000336216 C3orf84H3BNL1 204 aa4.49□□□□□ -1.69
HMG20A-201ENST00000336216 IGLV5-45A0A087WSX0 123 aa4.48□□□□□ -1.69
HMG20A-201ENST00000336216 IGHV3OR16-9A0A0B4J2B5 98 aa4.48□□□□□ -1.69
HMG20A-201ENST00000336216 NREPQ16612 68 aa4.48□□□□□ -1.69
HMG20A-201ENST00000336216 KRTAP24-1Q3LI83 254 aa4.48□□□□□ -1.69
HMG20A-201ENST00000336216 CYSTM1Q9H1C7 97 aa4.48□□□□□ -1.69
HMG20A-201ENST00000336216 X6R8D5 127 aa4.48□□□□□ -1.69
HMG20A-201ENST00000336216 LYSTQ99698 3801 aa4.48□□□□□ -1.69
HMG20A-201ENST00000336216 FBN1P35555 2871 aaKnown RBP4.48□□□□□ -1.69
HMG20A-201ENST00000336216 CCKP06307 115 aa4.48□□□□□ -1.69
HMG20A-201ENST00000336216 CRYGAP11844 174 aa4.48□□□□□ -1.69
HMG20A-201ENST00000336216 LYPD5Q6UWN5 251 aa4.48□□□□□ -1.69
HMG20A-201ENST00000336216 KRTAP1-3Q8IUG1 177 aa4.48□□□□□ -1.69
HMG20A-201ENST00000336216 BRK1Q8WUW1 75 aa4.48□□□□□ -1.69
HMG20A-201ENST00000336216 Q8IZM0 81 aa4.47□□□□□ -1.69
HMG20A-201ENST00000336216 LINC01561Q8N1V8 128 aa4.47□□□□□ -1.69
HMG20A-201ENST00000336216 TRAV10A0A0B4J240 114 aa4.47□□□□□ -1.69
HMG20A-201ENST00000336216 TRBV10-3A0A0K0K1G6 114 aa4.47□□□□□ -1.69
HMG20A-201ENST00000336216 LRCOL1A6NCL2 159 aa4.47□□□□□ -1.69
HMG20A-201ENST00000336216 UBE2AP49459 152 aa4.47□□□□□ -1.69
HMG20A-201ENST00000336216 KRTAP10-3P60369 221 aa4.47□□□□□ -1.69
HMG20A-201ENST00000336216 FUSP35637 526 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMG20A-201ENST00000336216 C10orf25Q5T742 122 aa4.47□□□□□ -1.69
HMG20A-201ENST00000336216 Q8N814 137 aa4.47□□□□□ -1.69
HMG20A-201ENST00000336216 CR1P17927 2039 aa4.46□□□□□ -1.69
HMG20A-201ENST00000336216 GIG44P09565 113 aaPredicted RBP4.46□□□□□ -1.7
HMG20A-201ENST00000336216 PRKDCP78527 4128 aaKnown RBP4.46□□□□□ -1.7
HMG20A-201ENST00000336216 CDK2AP2O75956 126 aa4.45□□□□□ -1.7
HMG20A-201ENST00000336216 ESRGQ1W209 222 aa4.45□□□□□ -1.7
HMG20A-201ENST00000336216 ZNF73O43830 326 aaPredicted RBP4.44□□□□□ -1.7
HMG20A-201ENST00000336216 Q8N9L7 120 aa4.44□□□□□ -1.7
HMG20A-201ENST00000336216 Q6ZRU5 148 aa4.44□□□□□ -1.7
HMG20A-201ENST00000336216 NDUFS5O43920 106 aa4.44□□□□□ -1.7
HMG20A-201ENST00000336216 C2orf48Q96LS8 159 aa4.44□□□□□ -1.7
HMG20A-201ENST00000336216 A0A1B0GUV1 79 aa4.43□□□□□ -1.7
HMG20A-201ENST00000336216 KRTAP1-1Q07627 177 aa4.43□□□□□ -1.7
HMG20A-201ENST00000336216 LY6G6CO95867 125 aa4.43□□□□□ -1.7
HMG20A-201ENST00000336216 PRR4Q16378 134 aa4.43□□□□□ -1.7
HMG20A-201ENST00000336216 PDZD2O15018 2839 aa4.43□□□□□ -1.7
HMG20A-201ENST00000336216 CSNK1G2-AS1Q8NCQ2 148 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms