RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 HIVEP1P15822 2718 aa10.76□□□□□ -0.69
VARS2-201ENST00000321897 MXRA5Q9NR99 2828 aa10.75□□□□□ -0.69
VARS2-201ENST00000321897 BRI3O95415 125 aa10.75□□□□□ -0.69
VARS2-201ENST00000321897 CCKP06307 115 aa10.75□□□□□ -0.69
VARS2-201ENST00000321897 FHL2Q14192 279 aa10.74□□□□□ -0.69
VARS2-201ENST00000321897 UNQ6190/PRO20217Q6UXQ8 127 aa10.74□□□□□ -0.69
VARS2-201ENST00000321897 CRYGAP11844 174 aa10.73□□□□□ -0.69
VARS2-201ENST00000321897 ATP5EP2Q5VTU8 51 aa10.73□□□□□ -0.69
VARS2-201ENST00000321897 C6orf223Q8N319 242 aa10.73□□□□□ -0.69
VARS2-201ENST00000321897 CELA1Q9UNI1 258 aa10.72□□□□□ -0.69
VARS2-201ENST00000321897 BEAN1Q3B7T3 259 aa10.71□□□□□ -0.69
VARS2-201ENST00000321897 BPY2O14599 106 aa10.71□□□□□ -0.69
VARS2-201ENST00000321897 NDUFC2-KCTD14E9PQ53 114 aa10.71□□□□□ -0.7
VARS2-201ENST00000321897 APCP25054 2843 aa10.71□□□□□ -0.7
VARS2-201ENST00000321897 IGHV4-30-4P0DP06 118 aa10.7□□□□□ -0.7
VARS2-201ENST00000321897 IGKV2-24A0A0C4DH68 120 aa10.7□□□□□ -0.7
VARS2-201ENST00000321897 FUSP35637 526 aaKnown RBP eCLIP10.7□□□□□ -0.7
VARS2-201ENST00000321897 Q8N814 137 aa10.69□□□□□ -0.7
VARS2-201ENST00000321897 COX7BP24311 80 aa10.69□□□□□ -0.7
VARS2-201ENST00000321897 NIPBLQ6KC79 2804 aaeCLIP10.69□□□□□ -0.7
VARS2-201ENST00000321897 Q8N9L7 120 aa10.69□□□□□ -0.7
VARS2-201ENST00000321897 IGKV2-28A0A075B6P5 120 aa10.69□□□□□ -0.7
VARS2-201ENST00000321897 IGLV5-39A0A0G2JS06 123 aa10.69□□□□□ -0.7
VARS2-201ENST00000321897 IGKV2D-28P01615 120 aa10.69□□□□□ -0.7
VARS2-201ENST00000321897 UBE2BP63146 152 aa10.67□□□□□ -0.7
VARS2-201ENST00000321897 C9orf129Q5T035 196 aaKnown RBP10.67□□□□□ -0.7
VARS2-201ENST00000321897 NANOS2P60321 138 aaKnown RBP10.66□□□□□ -0.7
VARS2-201ENST00000321897 DEFB131BA0A096LNP1 70 aa10.66□□□□□ -0.7
VARS2-201ENST00000321897 SMIM26A0A096LP01 95 aa10.66□□□□□ -0.7
VARS2-201ENST00000321897 CYSRT1A8MQ03 144 aa10.66□□□□□ -0.7
VARS2-201ENST00000321897 KPRPQ5T749 579 aaPredicted RBP10.66□□□□□ -0.7
VARS2-201ENST00000321897 A0A096LNI7 61 aa10.65□□□□□ -0.7
VARS2-201ENST00000321897 SPTSSBQ8NFR3 76 aa10.65□□□□□ -0.7
VARS2-201ENST00000321897 V9GYY9 64 aa10.65□□□□□ -0.7
VARS2-201ENST00000321897 TRAV7A0A075B6U4 112 aa10.65□□□□□ -0.7
VARS2-201ENST00000321897 LYRM9A8MSI8 78 aa10.65□□□□□ -0.7
VARS2-201ENST00000321897 MIFP14174 115 aa10.65□□□□□ -0.7
VARS2-201ENST00000321897 C11orf45Q8TAV5 145 aa10.65□□□□□ -0.7
VARS2-201ENST00000321897 C1orf195Q5TG92 126 aa10.64□□□□□ -0.71
VARS2-201ENST00000321897 CD164L2Q6UWJ8 174 aa10.64□□□□□ -0.71
VARS2-201ENST00000321897 SERP1Q9Y6X1 66 aa10.64□□□□□ -0.71
VARS2-201ENST00000321897 BAHCC1Q9P281 2608 aa10.63□□□□□ -0.71
VARS2-201ENST00000321897 LINC01561Q8N1V8 128 aa10.63□□□□□ -0.71
VARS2-201ENST00000321897 A0A087WZ39 114 aa10.62□□□□□ -0.71
VARS2-201ENST00000321897 A0A096LNT2 108 aa10.62□□□□□ -0.71
VARS2-201ENST00000321897 Q6ZTC4 211 aa10.62□□□□□ -0.71
VARS2-201ENST00000321897 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.62□□□□□ -0.71
VARS2-201ENST00000321897 KLK9Q2XQG4 91 aa10.62□□□□□ -0.71
VARS2-201ENST00000321897 ETDCA0A1B0GVM5 59 aa10.61□□□□□ -0.71
VARS2-201ENST00000321897 PDE6GP18545 87 aa10.61□□□□□ -0.71
VARS2-201ENST00000321897 Q6ZVQ6 151 aa10.61□□□□□ -0.71
VARS2-201ENST00000321897 FAM30AQ9NZY2 134 aa10.61□□□□□ -0.71
VARS2-201ENST00000321897 FAM19A3Q7Z5A8 133 aa10.6□□□□□ -0.71
VARS2-201ENST00000321897 RPL37AP8A6NKH3 93 aa10.59□□□□□ -0.71
VARS2-201ENST00000321897 LINC01547P58512 204 aaPredicted RBP10.59□□□□□ -0.71
VARS2-201ENST00000321897 IGHV3OR16-9A0A0B4J2B5 98 aa10.59□□□□□ -0.71
VARS2-201ENST00000321897 A0A0J9YWU9 116 aa10.58□□□□□ -0.71
VARS2-201ENST00000321897 WFDC10BQ8IUB3 73 aa10.58□□□□□ -0.71
VARS2-201ENST00000321897 TRBV10-3A0A0K0K1G6 114 aa10.58□□□□□ -0.72
VARS2-201ENST00000321897 FSHBP01225 129 aa10.58□□□□□ -0.72
VARS2-201ENST00000321897 RPS28P62857 69 aaKnown RBP10.57□□□□□ -0.72
VARS2-201ENST00000321897 IGLV5-45A0A087WSX0 123 aa10.57□□□□□ -0.72
VARS2-201ENST00000321897 TRAV10A0A0B4J240 114 aa10.57□□□□□ -0.72
VARS2-201ENST00000321897 TRBV7-6A0A0J9YX20 115 aa10.57□□□□□ -0.72
VARS2-201ENST00000321897 Q8IZM0 81 aa10.57□□□□□ -0.72
VARS2-201ENST00000321897 PSPHP1O15172 72 aa10.56□□□□□ -0.72
VARS2-201ENST00000321897 HIGD2AQ9BW72 106 aa10.56□□□□□ -0.72
VARS2-201ENST00000321897 C10orf25Q5T742 122 aa10.54□□□□□ -0.72
VARS2-201ENST00000321897 CYSTM1Q9H1C7 97 aa10.54□□□□□ -0.72
VARS2-201ENST00000321897 ZNF73O43830 326 aaPredicted RBP10.54□□□□□ -0.72
VARS2-201ENST00000321897 LELP1Q5T871 98 aa10.54□□□□□ -0.72
VARS2-201ENST00000321897 WFDC13Q8IUB5 93 aa10.54□□□□□ -0.72
VARS2-201ENST00000321897 TMEM254Q8TBM7 123 aa10.54□□□□□ -0.72
VARS2-201ENST00000321897 SPATA3Q8NHX4 192 aa10.53□□□□□ -0.72
VARS2-201ENST00000321897 MP68P56378 58 aa10.53□□□□□ -0.72
VARS2-201ENST00000321897 PRO0628Q9UI54 55 aa10.53□□□□□ -0.72
VARS2-201ENST00000321897 GIG44P09565 113 aaPredicted RBP10.52□□□□□ -0.73
VARS2-201ENST00000321897 NDUFC1O43677 76 aa10.52□□□□□ -0.73
VARS2-201ENST00000321897 LINC00474Q9P2X8 69 aa10.52□□□□□ -0.73
VARS2-201ENST00000321897 TM2D3Q9BRN9 247 aa10.51□□□□□ -0.73
VARS2-201ENST00000321897 LINC00336Q6ZUF6 198 aa10.51□□□□□ -0.73
VARS2-201ENST00000321897 X6R8D5 127 aa10.51□□□□□ -0.73
VARS2-201ENST00000321897 SYCNQ0VAF6 134 aa10.5□□□□□ -0.73
VARS2-201ENST00000321897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.5□□□□□ -0.73
VARS2-201ENST00000321897 CSMD2Q7Z408 3487 aa10.5□□□□□ -0.73
VARS2-201ENST00000321897 NDUFS5O43920 106 aa10.5□□□□□ -0.73
VARS2-201ENST00000321897 LINC00575Q6W349 94 aa10.5□□□□□ -0.73
VARS2-201ENST00000321897 MUC7Q8TAX7 377 aa10.5□□□□□ -0.73
VARS2-201ENST00000321897 CR1P17927 2039 aa10.49□□□□□ -0.73
VARS2-201ENST00000321897 C16orf95Q9H693 158 aa10.48□□□□□ -0.73
VARS2-201ENST00000321897 C2orf48Q96LS8 159 aa10.48□□□□□ -0.73
VARS2-201ENST00000321897 PRYO14603 147 aa10.48□□□□□ -0.73
VARS2-201ENST00000321897 M0R2N4 97 aa10.47□□□□□ -0.73
VARS2-201ENST00000321897 DEFB116Q30KQ4 102 aa10.45□□□□□ -0.74
VARS2-201ENST00000321897 LYPD5Q6UWN5 251 aa10.44□□□□□ -0.74
VARS2-201ENST00000321897 KRTAP1-3Q8IUG1 177 aa10.44□□□□□ -0.74
VARS2-201ENST00000321897 KRTAP10-3P60369 221 aa10.44□□□□□ -0.74
VARS2-201ENST00000321897 H3BQ85 93 aa10.43□□□□□ -0.74
VARS2-201ENST00000321897 Q6ZRU5 148 aa10.43□□□□□ -0.74
VARS2-201ENST00000321897 A0A1B0GUV1 79 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms