RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 MRPL55Q7Z7F7 128 aaKnown RBP5.06□□□□□ -1.6
MSL3-201ENST00000312196 ATP5LO75964 103 aa5.05□□□□□ -1.6
MSL3-201ENST00000312196 ZC2HC1BQ5TFG8 222 aa5.05□□□□□ -1.6
MSL3-201ENST00000312196 KRTAP13-1Q8IUC0 172 aa5.05□□□□□ -1.6
MSL3-201ENST00000312196 A0A1B0GV72 72 aa5.04□□□□□ -1.6
MSL3-201ENST00000312196 FAM19A2Q8N3H0 131 aa5.04□□□□□ -1.6
MSL3-201ENST00000312196 TOMM7Q9P0U1 55 aa5.04□□□□□ -1.6
MSL3-201ENST00000312196 HIST1H2BKO60814 126 aa5.03□□□□□ -1.6
MSL3-201ENST00000312196 HIST1H2BJP06899 126 aa5.03□□□□□ -1.6
MSL3-201ENST00000312196 HIST1H2BOP23527 126 aa5.03□□□□□ -1.6
MSL3-201ENST00000312196 HIST1H2BBP33778 126 aa5.03□□□□□ -1.6
MSL3-201ENST00000312196 HIST1H2BDP58876 126 aa5.03□□□□□ -1.6
MSL3-201ENST00000312196 HIST1H2BCP62807 126 aa5.03□□□□□ -1.6
MSL3-201ENST00000312196 HIST2H2BEQ16778 126 aa5.03□□□□□ -1.6
MSL3-201ENST00000312196 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.03□□□□□ -1.6
MSL3-201ENST00000312196 HIST1H2BHQ93079 126 aa5.03□□□□□ -1.6
MSL3-201ENST00000312196 C12orf57Q99622 126 aa5.03□□□□□ -1.6
MSL3-201ENST00000312196 HIST1H2BNQ99877 126 aa5.03□□□□□ -1.6
MSL3-201ENST00000312196 HIST1H2BMQ99879 126 aa5.03□□□□□ -1.6
MSL3-201ENST00000312196 A0A1B0GV90 55 aa5.03□□□□□ -1.6
MSL3-201ENST00000312196 HBDP02042 147 aa5.03□□□□□ -1.6
MSL3-201ENST00000312196 PRR26Q8N8Z3 221 aa5.03□□□□□ -1.6
MSL3-201ENST00000312196 TRAV12-1A0A0B4J245 112 aa5.02□□□□□ -1.61
MSL3-201ENST00000312196 UBR4Q5T4S7 5183 aa5.02□□□□□ -1.61
MSL3-201ENST00000312196 A0A096LNJ9 63 aa5.02□□□□□ -1.61
MSL3-201ENST00000312196 NDUFA6P56556 154 aa5.02□□□□□ -1.61
MSL3-201ENST00000312196 C18orf32Q8TCD1 76 aa5.02□□□□□ -1.61
MSL3-201ENST00000312196 CHCHD1Q96BP2 118 aaKnown RBP5.02□□□□□ -1.61
MSL3-201ENST00000312196 LINC00167Q96N53 147 aa5.02□□□□□ -1.61
MSL3-201ENST00000312196 ZNF22P17026 224 aaPredicted RBP5.01□□□□□ -1.61
MSL3-201ENST00000312196 RPL24P83731 157 aaKnown RBP5.01□□□□□ -1.61
MSL3-201ENST00000312196 V9GYY9 64 aa5.01□□□□□ -1.61
MSL3-201ENST00000312196 SERF1AO75920 110 aa5□□□□□ -1.61
MSL3-201ENST00000312196 SPINK8P0C7L1 97 aa5□□□□□ -1.61
MSL3-201ENST00000312196 SNRPEP62304 92 aaKnown RBP5□□□□□ -1.61
MSL3-201ENST00000312196 XAGE1AQ9HD64 81 aa5□□□□□ -1.61
MSL3-201ENST00000312196 CRYGAP11844 174 aa4.99□□□□□ -1.61
MSL3-201ENST00000312196 NKAPP1Q8N9T2 125 aa4.99□□□□□ -1.61
MSL3-201ENST00000312196 ZNF625Q96I27 306 aaPredicted RBP4.99□□□□□ -1.61
MSL3-201ENST00000312196 ERG28Q9UKR5 140 aa4.99□□□□□ -1.61
MSL3-201ENST00000312196 HSBP1O75506 76 aa4.98□□□□□ -1.61
MSL3-201ENST00000312196 TSPAN13O95857 204 aa4.98□□□□□ -1.61
MSL3-201ENST00000312196 FABP4P15090 132 aa4.98□□□□□ -1.61
MSL3-201ENST00000312196 A0A0A0MQY5 61 aa4.98□□□□□ -1.61
MSL3-201ENST00000312196 PMCHL2Q9BQD1 86 aa4.98□□□□□ -1.61
MSL3-201ENST00000312196 KRTAP3-3Q9BYR6 98 aa4.98□□□□□ -1.61
MSL3-201ENST00000312196 KRTAP3-2Q9BYR7 98 aa4.98□□□□□ -1.61
MSL3-201ENST00000312196 LOC107984156A0A0G2JMH3 177 aa4.97□□□□□ -1.61
MSL3-201ENST00000312196 LCE2DQ5TA82 110 aaPredicted RBP4.97□□□□□ -1.61
MSL3-201ENST00000312196 BAGE3Q86Y29 109 aa4.97□□□□□ -1.61
MSL3-201ENST00000312196 ARL17AQ8IVW1 177 aa4.97□□□□□ -1.61
MSL3-201ENST00000312196 SND1-IT1Q9HBX3 110 aa4.97□□□□□ -1.61
MSL3-201ENST00000312196 TMEM223A0PJW6 202 aa4.97□□□□□ -1.61
MSL3-201ENST00000312196 RNF213Q63HN8 5207 aa4.97□□□□□ -1.61
MSL3-201ENST00000312196 C11orf86A6NJI1 115 aa4.96□□□□□ -1.61
MSL3-201ENST00000312196 M0R378 163 aa4.96□□□□□ -1.62
MSL3-201ENST00000312196 SCGB1A1P11684 91 aa4.96□□□□□ -1.62
MSL3-201ENST00000312196 UBE2V1Q13404 147 aa4.96□□□□□ -1.62
MSL3-201ENST00000312196 PRYO14603 147 aa4.95□□□□□ -1.62
MSL3-201ENST00000312196 UBE2AP49459 152 aa4.95□□□□□ -1.62
MSL3-201ENST00000312196 SPAG11AQ6PDA7 123 aa4.95□□□□□ -1.62
MSL3-201ENST00000312196 LRP2P98164 4655 aa4.95□□□□□ -1.62
MSL3-201ENST00000312196 SMIM6P0DI80 62 aa4.95□□□□□ -1.62
MSL3-201ENST00000312196 AKR1D1P51857 326 aa4.95□□□□□ -1.62
MSL3-201ENST00000312196 TYMSOSQ8TAI1 123 aa4.95□□□□□ -1.62
MSL3-201ENST00000312196 ZNF706Q9Y5V0 76 aaPredicted RBP4.95□□□□□ -1.62
MSL3-201ENST00000312196 SPRR1AP35321 89 aa4.94□□□□□ -1.62
MSL3-201ENST00000312196 LINC00337Q8N6G1 96 aa4.94□□□□□ -1.62
MSL3-201ENST00000312196 IFI27L1Q96BM0 104 aa4.94□□□□□ -1.62
MSL3-201ENST00000312196 TMEM126AQ9H061 195 aa4.94□□□□□ -1.62
MSL3-201ENST00000312196 IGKV2D-26A0A0A0MRZ7 120 aa4.94□□□□□ -1.62
MSL3-201ENST00000312196 MTURNQ8N3F0 131 aa4.93□□□□□ -1.62
MSL3-201ENST00000312196 TRBV10-2A0A0K0K1G8 114 aa4.92□□□□□ -1.62
MSL3-201ENST00000312196 KRTAP13-2Q52LG2 175 aa4.92□□□□□ -1.62
MSL3-201ENST00000312196 ATOH7Q8N100 152 aa4.92□□□□□ -1.62
MSL3-201ENST00000312196 KCNQ1DNQ9H478 68 aa4.92□□□□□ -1.62
MSL3-201ENST00000312196 A0A087X002 238 aa4.92□□□□□ -1.62
MSL3-201ENST00000312196 RPL37AP8A6NKH3 93 aa4.92□□□□□ -1.62
MSL3-201ENST00000312196 NMUP48645 174 aa4.92□□□□□ -1.62
MSL3-201ENST00000312196 TMEM170BQ5T4T1 132 aa4.92□□□□□ -1.62
MSL3-201ENST00000312196 HIST3H2BBQ8N257 126 aa4.92□□□□□ -1.62
MSL3-201ENST00000312196 PLEKHB2Q96CS7 222 aa4.92□□□□□ -1.62
MSL3-201ENST00000312196 MYMXA0A1B0GTQ4 84 aa4.91□□□□□ -1.62
MSL3-201ENST00000312196 H3BS24 57 aa4.91□□□□□ -1.62
MSL3-201ENST00000312196 PFN2P35080 140 aa4.91□□□□□ -1.62
MSL3-201ENST00000312196 LCE2AQ5TA79 106 aaPredicted RBP4.91□□□□□ -1.62
MSL3-201ENST00000312196 LINC00304Q8N9R0 145 aa4.91□□□□□ -1.62
MSL3-201ENST00000312196 MUC17Q685J3 4493 aa4.91□□□□□ -1.62
MSL3-201ENST00000312196 TSTD3H0UI37 97 aa4.91□□□□□ -1.62
MSL3-201ENST00000312196 LEPROTO15243 131 aa4.91□□□□□ -1.62
MSL3-201ENST00000312196 DLEU1O43261 78 aa4.91□□□□□ -1.62
MSL3-201ENST00000312196 RPS29P62273 56 aaKnown RBP4.91□□□□□ -1.62
MSL3-201ENST00000312196 FP248Q71RG6 208 aaPredicted RBP4.91□□□□□ -1.62
MSL3-201ENST00000312196 HIST1H2BLQ99880 126 aa4.91□□□□□ -1.62
MSL3-201ENST00000312196 PLNP26678 52 aa4.9□□□□□ -1.62
MSL3-201ENST00000312196 TPRXLQ17RH7 258 aa4.9□□□□□ -1.62
MSL3-201ENST00000312196 LINC00483Q53H64 154 aa4.9□□□□□ -1.62
MSL3-201ENST00000312196 FAM19A1Q7Z5A9 133 aa4.9□□□□□ -1.62
MSL3-201ENST00000312196 B5MCH6 92 aa4.9□□□□□ -1.63
MSL3-201ENST00000312196 KRTAP4-16G5E9R7 235 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms