RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 C9orf92A6NGG3 77 aa8.78□□□□□ -1
CDH11-201ENST00000268603 MUC22E2RYF6 1773 aaPredicted RBP8.78□□□□□ -1
CDH11-201ENST00000268603 AGRNO00468 2067 aa8.77□□□□□ -1.01
CDH11-201ENST00000268603 NOTCH2Q04721 2471 aa8.77□□□□□ -1.01
CDH11-201ENST00000268603 EPM2AB3EWF7 344 aa8.76□□□□□ -1.01
CDH11-201ENST00000268603 IGLV6-57P01721 117 aa8.76□□□□□ -1.01
CDH11-201ENST00000268603 AMELXQ99217 191 aa8.75□□□□□ -1.01
CDH11-201ENST00000268603 CACNA1AO00555 2505 aa8.75□□□□□ -1.01
CDH11-201ENST00000268603 C9orf129Q5T035 196 aaKnown RBP8.75□□□□□ -1.01
CDH11-201ENST00000268603 LINC01561Q8N1V8 128 aa8.74□□□□□ -1.01
CDH11-201ENST00000268603 WWC2-AS2Q96NR7 200 aa8.74□□□□□ -1.01
CDH11-201ENST00000268603 CEP192Q8TEP8 1941 aa8.74□□□□□ -1.01
CDH11-201ENST00000268603 NBDYA0A0U1RRE5 68 aa8.74□□□□□ -1.01
CDH11-201ENST00000268603 LINC00476Q8WZB0 136 aa8.74□□□□□ -1.01
CDH11-201ENST00000268603 H3BPC8 53 aa8.73□□□□□ -1.01
CDH11-201ENST00000268603 IGLV5-37A0A075B6J1 123 aa8.72□□□□□ -1.01
CDH11-201ENST00000268603 CNFNQ9BYD5 112 aa8.72□□□□□ -1.01
CDH11-201ENST00000268603 ABCA2Q9BZC7 2435 aa8.72□□□□□ -1.01
CDH11-201ENST00000268603 PTPRSQ13332 1948 aa8.71□□□□□ -1.01
CDH11-201ENST00000268603 UQCR11O14957 56 aa8.7□□□□□ -1.02
CDH11-201ENST00000268603 IGF2RP11717 2491 aa8.7□□□□□ -1.02
CDH11-201ENST00000268603 RBM12B-AS1Q9P1G2 102 aa8.69□□□□□ -1.02
CDH11-201ENST00000268603 C5orf42Q9H799 3197 aa8.69□□□□□ -1.02
CDH11-201ENST00000268603 LUZP6Q538Z0 58 aa8.69□□□□□ -1.02
CDH11-201ENST00000268603 C11orf72Q8NBR9 251 aa8.69□□□□□ -1.02
CDH11-201ENST00000268603 ST20-AS1Q8NBB2 130 aa8.68□□□□□ -1.02
CDH11-201ENST00000268603 CCDC168Q8NDH2 2452 aa8.68□□□□□ -1.02
CDH11-201ENST00000268603 MIR22HGQ0VDD5 57 aa8.68□□□□□ -1.02
CDH11-201ENST00000268603 NAV3Q8IVL0 2385 aa8.67□□□□□ -1.02
CDH11-201ENST00000268603 EML5Q05BV3 1969 aa8.67□□□□□ -1.02
CDH11-201ENST00000268603 SMR3BP02814 79 aaPredicted RBP8.67□□□□□ -1.02
CDH11-201ENST00000268603 LOC101927531A0A1B0GV80 90 aa8.67□□□□□ -1.02
CDH11-201ENST00000268603 COA5Q86WW8 74 aa8.66□□□□□ -1.02
CDH11-201ENST00000268603 BCE1O60756 84 aa8.66□□□□□ -1.02
CDH11-201ENST00000268603 A0A0D9SG42 100 aa8.66□□□□□ -1.02
CDH11-201ENST00000268603 DSCR10P59022 87 aa8.66□□□□□ -1.02
CDH11-201ENST00000268603 C2CD3Q4AC94 2353 aa8.66□□□□□ -1.02
CDH11-201ENST00000268603 URB1-AS1Q96HZ7 61 aa8.65□□□□□ -1.02
CDH11-201ENST00000268603 LINC00304Q8N9R0 145 aa8.65□□□□□ -1.02
CDH11-201ENST00000268603 A8MUN3 132 aa8.64□□□□□ -1.03
CDH11-201ENST00000268603 OBSCN-AS1Q96MR7 158 aa8.64□□□□□ -1.03
CDH11-201ENST00000268603 Q6ZQT0 140 aa8.64□□□□□ -1.03
CDH11-201ENST00000268603 TM2D3Q9BRN9 247 aa8.64□□□□□ -1.03
CDH11-201ENST00000268603 M0R2T5 61 aa8.63□□□□□ -1.03
CDH11-201ENST00000268603 NCOR2Q9Y618 2525 aa8.63□□□□□ -1.03
CDH11-201ENST00000268603 TLN1Q9Y490 2541 aaKnown RBP8.63□□□□□ -1.03
CDH11-201ENST00000268603 Q6ZRX8 168 aa8.63□□□□□ -1.03
CDH11-201ENST00000268603 C10orf142B7Z368 130 aa8.62□□□□□ -1.03
CDH11-201ENST00000268603 ZNF575Q86XF7 245 aa8.62□□□□□ -1.03
CDH11-201ENST00000268603 LRP4O75096 1905 aa8.62□□□□□ -1.03
CDH11-201ENST00000268603 KRTAP24-1Q3LI83 254 aa8.62□□□□□ -1.03
CDH11-201ENST00000268603 ELOF1P60002 83 aaKnown RBP8.62□□□□□ -1.03
CDH11-201ENST00000268603 K7EQZ3 153 aa8.61□□□□□ -1.03
CDH11-201ENST00000268603 MRPL34Q9BQ48 92 aaKnown RBP8.61□□□□□ -1.03
CDH11-201ENST00000268603 LINC00588Q9Y4M8 146 aa8.61□□□□□ -1.03
CDH11-201ENST00000268603 RPS28P62857 69 aaKnown RBP8.59□□□□□ -1.03
CDH11-201ENST00000268603 CYP4F30PQ9H0H9 118 aa8.59□□□□□ -1.03
CDH11-201ENST00000268603 CDC42SE1Q9NRR8 79 aa8.59□□□□□ -1.03
CDH11-201ENST00000268603 A0A1B0GW54 56 aa8.59□□□□□ -1.03
CDH11-201ENST00000268603 PRO3102Q9H379 93 aa8.58□□□□□ -1.04
CDH11-201ENST00000268603 COL5A1P20908 1838 aaPredicted RBP8.58□□□□□ -1.04
CDH11-201ENST00000268603 PRRC2CQ9Y520 2896 aaKnown RBP8.58□□□□□ -1.04
CDH11-201ENST00000268603 CSNK1G2-AS1Q8NCQ2 148 aa8.58□□□□□ -1.04
CDH11-201ENST00000268603 FAM168BA1KXE4 195 aa8.57□□□□□ -1.04
CDH11-201ENST00000268603 LINC00310P59036 64 aa8.57□□□□□ -1.04
CDH11-201ENST00000268603 TRBV7-4A0A0J9YYF1 115 aa8.57□□□□□ -1.04
CDH11-201ENST00000268603 MYO18BQ8IUG5 2567 aa8.56□□□□□ -1.04
CDH11-201ENST00000268603 A8MWP4 228 aa8.56□□□□□ -1.04
CDH11-201ENST00000268603 MKI67P46013 3256 aaKnown RBP8.56□□□□□ -1.04
CDH11-201ENST00000268603 A0A1W2PPR1 153 aa8.55□□□□□ -1.04
CDH11-201ENST00000268603 IGLV5-48A0A075B6I7 105 aa8.55□□□□□ -1.04
CDH11-201ENST00000268603 FAM218AQ96MZ4 157 aa8.55□□□□□ -1.04
CDH11-201ENST00000268603 ERC2-IT1O76042 136 aa8.55□□□□□ -1.04
CDH11-201ENST00000268603 IGLV5-39A0A0G2JS06 123 aa8.54□□□□□ -1.04
CDH11-201ENST00000268603 BRCA2P51587 3418 aa8.54□□□□□ -1.04
CDH11-201ENST00000268603 MYO9AB2RTY4 2548 aa8.54□□□□□ -1.04
CDH11-201ENST00000268603 LOC110117498A0A087WWA1 95 aa8.54□□□□□ -1.04
CDH11-201ENST00000268603 IGHV3OR16-9A0A0B4J2B5 98 aa8.53□□□□□ -1.04
CDH11-201ENST00000268603 H3BNG1 76 aa8.53□□□□□ -1.04
CDH11-201ENST00000268603 CEP295Q9C0D2 2601 aa8.53□□□□□ -1.04
CDH11-201ENST00000268603 CPAMD8Q8IZJ3 1885 aa8.52□□□□□ -1.04
CDH11-201ENST00000268603 DNAH10OSP0CZ25 163 aa8.52□□□□□ -1.05
CDH11-201ENST00000268603 NAV2Q8IVL1 2488 aa8.52□□□□□ -1.05
CDH11-201ENST00000268603 A0A096LNJ9 63 aa8.51□□□□□ -1.05
CDH11-201ENST00000268603 LINC00483Q53H64 154 aa8.51□□□□□ -1.05
CDH11-201ENST00000268603 CAMK2N1Q7Z7J9 78 aa8.5□□□□□ -1.05
CDH11-201ENST00000268603 LCA10Q71F78 164 aa8.5□□□□□ -1.05
CDH11-201ENST00000268603 A0A0C4DFX4 3053 aa8.49□□□□□ -1.05
CDH11-201ENST00000268603 CD164Q04900 197 aa8.49□□□□□ -1.05
CDH11-201ENST00000268603 BPTFQ12830 3046 aa8.48□□□□□ -1.05
CDH11-201ENST00000268603 IGLV5-45A0A087WSX0 123 aa8.48□□□□□ -1.05
CDH11-201ENST00000268603 CHD7Q9P2D1 2997 aa8.48□□□□□ -1.05
CDH11-201ENST00000268603 TLN2Q9Y4G6 2542 aa8.47□□□□□ -1.05
CDH11-201ENST00000268603 GVQW2A0A096LPI5 108 aaPredicted RBP8.47□□□□□ -1.05
CDH11-201ENST00000268603 HTTP42858 3142 aa8.47□□□□□ -1.05
CDH11-201ENST00000268603 RANBP2P49792 3224 aaKnown RBP8.46□□□□□ -1.05
CDH11-201ENST00000268603 LAMA3Q16787 3333 aa8.46□□□□□ -1.06
CDH11-201ENST00000268603 KTN1-AS1Q86SY8 53 aa8.46□□□□□ -1.06
CDH11-201ENST00000268603 SETD2Q9BYW2 2564 aaPredicted RBP8.45□□□□□ -1.06
CDH11-201ENST00000268603 Q6ZSA8 131 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms