RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 FHL2Q14192 279 aa11.41□□□□□ -0.58
SREBF1-201ENST00000261646 LINC01006Q8NI28 216 aa11.41□□□□□ -0.58
SREBF1-201ENST00000261646 ITPR3Q14573 2671 aa11.4□□□□□ -0.58
SREBF1-201ENST00000261646 NDUFS5O43920 106 aa11.4□□□□□ -0.58
SREBF1-201ENST00000261646 J3QKU1 62 aa11.39□□□□□ -0.59
SREBF1-201ENST00000261646 KLK9Q2XQG4 91 aa11.39□□□□□ -0.59
SREBF1-201ENST00000261646 UBE2DNLQ8IWF7 75 aa11.39□□□□□ -0.59
SREBF1-201ENST00000261646 LINC00575Q6W349 94 aa11.39□□□□□ -0.59
SREBF1-201ENST00000261646 FAM30AQ9NZY2 134 aa11.39□□□□□ -0.59
SREBF1-201ENST00000261646 TMEM254Q8TBM7 123 aa11.38□□□□□ -0.59
SREBF1-201ENST00000261646 C6orf223Q8N319 242 aa11.37□□□□□ -0.59
SREBF1-201ENST00000261646 TRBV7-6A0A0J9YX20 115 aa11.36□□□□□ -0.59
SREBF1-201ENST00000261646 M0R378 163 aa11.36□□□□□ -0.59
SREBF1-201ENST00000261646 Q8N9L7 120 aa11.36□□□□□ -0.59
SREBF1-201ENST00000261646 MUC7Q8TAX7 377 aa11.36□□□□□ -0.59
SREBF1-201ENST00000261646 PRO0628Q9UI54 55 aa11.36□□□□□ -0.59
SREBF1-201ENST00000261646 LINC01561Q8N1V8 128 aa11.35□□□□□ -0.59
SREBF1-201ENST00000261646 RELNP78509 3460 aa11.34□□□□□ -0.59
SREBF1-201ENST00000261646 ITPR1Q14643 2758 aa11.34□□□□□ -0.59
SREBF1-201ENST00000261646 HIGD2AQ9BW72 106 aa11.34□□□□□ -0.59
SREBF1-201ENST00000261646 ASH1LQ9NR48 2969 aaKnown RBP11.34□□□□□ -0.59
SREBF1-201ENST00000261646 PRYO14603 147 aa11.34□□□□□ -0.59
SREBF1-201ENST00000261646 WFDC13Q8IUB5 93 aa11.34□□□□□ -0.59
SREBF1-201ENST00000261646 WFDC10BQ8IUB3 73 aa11.34□□□□□ -0.59
SREBF1-201ENST00000261646 SMR3AQ99954 134 aa11.33□□□□□ -0.6
SREBF1-201ENST00000261646 SYCNQ0VAF6 134 aa11.32□□□□□ -0.6
SREBF1-201ENST00000261646 NDUFB1O75438 58 aa11.31□□□□□ -0.6
SREBF1-201ENST00000261646 A0A096LNI7 61 aa11.31□□□□□ -0.6
SREBF1-201ENST00000261646 LELP1Q5T871 98 aa11.31□□□□□ -0.6
SREBF1-201ENST00000261646 A0A1B0GUV1 79 aa11.31□□□□□ -0.6
SREBF1-201ENST00000261646 H0Y9J4 135 aa11.31□□□□□ -0.6
SREBF1-201ENST00000261646 ATRQ13535 2644 aa11.3□□□□□ -0.6
SREBF1-201ENST00000261646 NANOS2P60321 138 aaKnown RBP11.3□□□□□ -0.6
SREBF1-201ENST00000261646 IGKV2-24A0A0C4DH68 120 aa11.29□□□□□ -0.6
SREBF1-201ENST00000261646 TRAV10A0A0B4J240 114 aa11.28□□□□□ -0.6
SREBF1-201ENST00000261646 RPL37AP8A6NKH3 93 aa11.28□□□□□ -0.6
SREBF1-201ENST00000261646 SPATA3Q8NHX4 192 aa11.27□□□□□ -0.6
SREBF1-201ENST00000261646 CXCL6P80162 114 aa11.27□□□□□ -0.61
SREBF1-201ENST00000261646 C9orf129Q5T035 196 aaKnown RBP11.27□□□□□ -0.61
SREBF1-201ENST00000261646 MRPL55Q7Z7F7 128 aaKnown RBP11.27□□□□□ -0.61
SREBF1-201ENST00000261646 PSPHP1O15172 72 aa11.26□□□□□ -0.61
SREBF1-201ENST00000261646 IGLV1-51P01701 117 aa11.26□□□□□ -0.61
SREBF1-201ENST00000261646 ESRGQ1W209 222 aa11.24□□□□□ -0.61
SREBF1-201ENST00000261646 Q6ZQT0 140 aa11.24□□□□□ -0.61
SREBF1-201ENST00000261646 TM2D3Q9BRN9 247 aa11.24□□□□□ -0.61
SREBF1-201ENST00000261646 A0A0J9YWU9 116 aa11.23□□□□□ -0.61
SREBF1-201ENST00000261646 TEX15Q9BXT5 2789 aa11.23□□□□□ -0.61
SREBF1-201ENST00000261646 NBEAL2Q6ZNJ1 2754 aa11.23□□□□□ -0.61
SREBF1-201ENST00000261646 INAFM1C9JVW0 142 aa11.23□□□□□ -0.61
SREBF1-201ENST00000261646 CHKB-CPT1BH3BT56 60 aa11.22□□□□□ -0.61
SREBF1-201ENST00000261646 C1orf137Q5JT78 98 aa11.22□□□□□ -0.61
SREBF1-201ENST00000261646 IGSF10Q6WRI0 2623 aa11.22□□□□□ -0.61
SREBF1-201ENST00000261646 EGFEM1PQ0D2K5 195 aa11.21□□□□□ -0.61
SREBF1-201ENST00000261646 DHRS4-AS1Q9P1J3 65 aa11.21□□□□□ -0.61
SREBF1-201ENST00000261646 UBE2AP49459 152 aa11.21□□□□□ -0.61
SREBF1-201ENST00000261646 KPRPQ5T749 579 aaPredicted RBP11.21□□□□□ -0.62
SREBF1-201ENST00000261646 MGAM2Q2M2H8 2515 aa11.2□□□□□ -0.62
SREBF1-201ENST00000261646 GCN1Q92616 2671 aaKnown RBP11.2□□□□□ -0.62
SREBF1-201ENST00000261646 BCE1O60756 84 aa11.2□□□□□ -0.62
SREBF1-201ENST00000261646 LINC01600Q96MT4 127 aa11.2□□□□□ -0.62
SREBF1-201ENST00000261646 ZANQ9Y493 2812 aa11.2□□□□□ -0.62
SREBF1-201ENST00000261646 C10orf25Q5T742 122 aa11.2□□□□□ -0.62
SREBF1-201ENST00000261646 LINC00208Q96KT6 92 aa11.2□□□□□ -0.62
SREBF1-201ENST00000261646 A6NED7 52 aa11.19□□□□□ -0.62
SREBF1-201ENST00000261646 PMAIP1Q13794 54 aa11.19□□□□□ -0.62
SREBF1-201ENST00000261646 C2orf48Q96LS8 159 aa11.19□□□□□ -0.62
SREBF1-201ENST00000261646 HELZ2Q9BYK8 2649 aaKnown RBP11.18□□□□□ -0.62
SREBF1-201ENST00000261646 DEFB131BA0A096LNP1 70 aa11.17□□□□□ -0.62
SREBF1-201ENST00000261646 IGKV4-1P06312 121 aa11.16□□□□□ -0.62
SREBF1-201ENST00000261646 LINC00336Q6ZUF6 198 aa11.15□□□□□ -0.62
SREBF1-201ENST00000261646 C11orf45Q8TAV5 145 aa11.14□□□□□ -0.63
SREBF1-201ENST00000261646 LOC110117498A0A087WWA1 95 aa11.14□□□□□ -0.63
SREBF1-201ENST00000261646 LINC00474Q9P2X8 69 aa11.14□□□□□ -0.63
SREBF1-201ENST00000261646 DEFB116Q30KQ4 102 aa11.13□□□□□ -0.63
SREBF1-201ENST00000261646 SMG1Q96Q15 3661 aaKnown RBP11.13□□□□□ -0.63
SREBF1-201ENST00000261646 SMIM29Q86T20 159 aa11.13□□□□□ -0.63
SREBF1-201ENST00000261646 Q6ZRU5 148 aa11.12□□□□□ -0.63
SREBF1-201ENST00000261646 TEP1Q99973 2627 aaKnown RBP11.11□□□□□ -0.63
SREBF1-201ENST00000261646 LY6G6DO95868 133 aa11.11□□□□□ -0.63
SREBF1-201ENST00000261646 FAM104AQ969W3 186 aa11.1□□□□□ -0.63
SREBF1-201ENST00000261646 H7BZZ5 65 aa11.1□□□□□ -0.63
SREBF1-201ENST00000261646 CRYBG3Q68DQ2 2970 aa11.09□□□□□ -0.63
SREBF1-201ENST00000261646 PRR15LQ9BU68 103 aa11.09□□□□□ -0.63
SREBF1-201ENST00000261646 C6orf48Q9UBA6 75 aa11.09□□□□□ -0.63
SREBF1-201ENST00000261646 MAST4O15021 2626 aa11.08□□□□□ -0.64
SREBF1-201ENST00000261646 KIAA0087Q14695 138 aa11.08□□□□□ -0.64
SREBF1-201ENST00000261646 UBR5O95071 2799 aaPredicted RBP11.07□□□□□ -0.64
SREBF1-201ENST00000261646 SEC61GP60059 68 aa11.07□□□□□ -0.64
SREBF1-201ENST00000261646 KLKP1Q107X0 134 aa11.07□□□□□ -0.64
SREBF1-201ENST00000261646 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.06□□□□□ -0.64
SREBF1-201ENST00000261646 A0A087WSZ3 146 aa11.06□□□□□ -0.64
SREBF1-201ENST00000261646 OXLD1Q5BKU9 147 aa11.05□□□□□ -0.64
SREBF1-201ENST00000261646 IGHV4-30-4P0DP06 118 aa11.05□□□□□ -0.64
SREBF1-201ENST00000261646 B9D2Q9BPU9 175 aa11.05□□□□□ -0.64
SREBF1-201ENST00000261646 CYSTM1Q9H1C7 97 aa11.05□□□□□ -0.64
SREBF1-201ENST00000261646 DCHS2Q6V1P9 2916 aa11.04□□□□□ -0.64
SREBF1-201ENST00000261646 CSMD1Q96PZ7 3565 aa11.04□□□□□ -0.64
SREBF1-201ENST00000261646 LYPD5Q6UWN5 251 aa11.04□□□□□ -0.64
SREBF1-201ENST00000261646 ELOF1P60002 83 aaKnown RBP11.03□□□□□ -0.64
SREBF1-201ENST00000261646 HRNRQ86YZ3 2850 aaPredicted RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms