RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TRBV20-1A0A075B6N2 111 aa14.83□□□□□ -0.04
SIX3-201ENST00000260653 OR13C6PQ8NH95 151 aa14.82□□□□□ -0.04
SIX3-201ENST00000260653 KRTAP1-5Q9BYS1 174 aa14.82□□□□□ -0.04
SIX3-201ENST00000260653 PSMB2P49721 201 aa14.81□□□□□ -0.04
SIX3-201ENST00000260653 C6orf48Q9UBA6 75 aa14.81□□□□□ -0.04
SIX3-201ENST00000260653 CASC10Q5T4H9 136 aa14.8□□□□□ -0.04
SIX3-201ENST00000260653 CAMK2N2Q96S95 79 aa14.8□□□□□ -0.04
SIX3-201ENST00000260653 IGKV2-28A0A075B6P5 120 aa14.8□□□□□ -0.04
SIX3-201ENST00000260653 IGKV2D-28P01615 120 aa14.8□□□□□ -0.04
SIX3-201ENST00000260653 GVQW2A0A096LPI5 108 aaPredicted RBP14.79□□□□□ -0.04
SIX3-201ENST00000260653 H3BMG7 143 aa14.78□□□□□ -0.04
SIX3-201ENST00000260653 TRIAP1O43715 76 aa14.77□□□□□ -0.04
SIX3-201ENST00000260653 SCGB1C2P0DMR2 95 aa14.77□□□□□ -0.04
SIX3-201ENST00000260653 LINC00337Q8N6G1 96 aa14.77□□□□□ -0.05
SIX3-201ENST00000260653 LYRM7Q5U5X0 104 aa14.76□□□□□ -0.05
SIX3-201ENST00000260653 Q6ZRU5 148 aa14.76□□□□□ -0.05
SIX3-201ENST00000260653 RMI2Q96E14 147 aa14.76□□□□□ -0.05
SIX3-201ENST00000260653 TRBV30A0A0K0K1B3 111 aa14.75□□□□□ -0.05
SIX3-201ENST00000260653 J3KT08 172 aa14.75□□□□□ -0.05
SIX3-201ENST00000260653 TCL1BO95988 128 aa14.75□□□□□ -0.05
SIX3-201ENST00000260653 C2orf48Q96LS8 159 aa14.75□□□□□ -0.05
SIX3-201ENST00000260653 C9JAW5 83 aa14.74□□□□□ -0.05
SIX3-201ENST00000260653 TTC32Q5I0X7 151 aa14.73□□□□□ -0.05
SIX3-201ENST00000260653 TRAV13-2A0A0B4J235 113 aa14.73□□□□□ -0.05
SIX3-201ENST00000260653 USP17L23D6RBM5 183 aa14.73□□□□□ -0.05
SIX3-201ENST00000260653 TGP01266 2768 aa14.73□□□□□ -0.05
SIX3-201ENST00000260653 DNAH10Q8IVF4 4471 aa14.71□□□□□ -0.05
SIX3-201ENST00000260653 Q8NDZ9 215 aa14.7□□□□□ -0.06
SIX3-201ENST00000260653 MUC7Q8TAX7 377 aa14.7□□□□□ -0.06
SIX3-201ENST00000260653 LECT2O14960 151 aa14.7□□□□□ -0.06
SIX3-201ENST00000260653 PRR3P79522 188 aaKnown RBP14.7□□□□□ -0.06
SIX3-201ENST00000260653 GAGE2BQ13066 116 aa14.7□□□□□ -0.06
SIX3-201ENST00000260653 GAGE2EQ4V326 116 aa14.7□□□□□ -0.06
SIX3-201ENST00000260653 GAGE2DQ9UEU5 116 aa14.7□□□□□ -0.06
SIX3-201ENST00000260653 SYCNQ0VAF6 134 aa14.68□□□□□ -0.06
SIX3-201ENST00000260653 NDUFC2O95298 119 aa14.67□□□□□ -0.06
SIX3-201ENST00000260653 XAGE1AQ9HD64 81 aa14.67□□□□□ -0.06
SIX3-201ENST00000260653 PRO0461Q9UI25 63 aa14.67□□□□□ -0.06
SIX3-201ENST00000260653 COX6CP09669 75 aa14.66□□□□□ -0.06
SIX3-201ENST00000260653 A0A1B0GX51 115 aa14.65□□□□□ -0.06
SIX3-201ENST00000260653 SLPIP03973 132 aa14.65□□□□□ -0.06
SIX3-201ENST00000260653 CLEC2BQ92478 149 aa14.65□□□□□ -0.06
SIX3-201ENST00000260653 VPS13DQ5THJ4 4388 aa14.65□□□□□ -0.06
SIX3-201ENST00000260653 NDUFC2-KCTD14E9PQ53 114 aa14.63□□□□□ -0.07
SIX3-201ENST00000260653 NCR3O14931 201 aa14.63□□□□□ -0.07
SIX3-201ENST00000260653 CARD19Q96LW7 228 aa14.63□□□□□ -0.07
SIX3-201ENST00000260653 NBDYA0A0U1RRE5 68 aa14.63□□□□□ -0.07
SIX3-201ENST00000260653 SMIM11BQ8TCY0 68 aa14.62□□□□□ -0.07
SIX3-201ENST00000260653 RPL28P46779 137 aaKnown RBP14.61□□□□□ -0.07
SIX3-201ENST00000260653 ATXN8Q156A1 80 aa14.61□□□□□ -0.07
SIX3-201ENST00000260653 PSCAO43653 123 aa14.61□□□□□ -0.07
SIX3-201ENST00000260653 Q6ZRP5 223 aa14.61□□□□□ -0.07
SIX3-201ENST00000260653 V9GYY9 64 aa14.61□□□□□ -0.07
SIX3-201ENST00000260653 Q6Q795 121 aa14.59□□□□□ -0.07
SIX3-201ENST00000260653 RPS28P62857 69 aaKnown RBP14.58□□□□□ -0.07
SIX3-201ENST00000260653 SMCPP49901 116 aaPredicted RBP14.57□□□□□ -0.08
SIX3-201ENST00000260653 LST1O00453 97 aa14.57□□□□□ -0.08
SIX3-201ENST00000260653 SNCGO76070 127 aa14.56□□□□□ -0.08
SIX3-201ENST00000260653 LINC01620Q4KN68 170 aa14.56□□□□□ -0.08
SIX3-201ENST00000260653 RPL18AQ02543 176 aaKnown RBP14.55□□□□□ -0.08
SIX3-201ENST00000260653 HRCT1Q6UXD1 115 aa14.55□□□□□ -0.08
SIX3-201ENST00000260653 PRO0628Q9UI54 55 aa14.54□□□□□ -0.08
SIX3-201ENST00000260653 M0R2N4 97 aa14.54□□□□□ -0.08
SIX3-201ENST00000260653 C4orf26Q17RF5 130 aa14.53□□□□□ -0.08
SIX3-201ENST00000260653 S100A7L2Q5SY68 101 aa14.53□□□□□ -0.08
SIX3-201ENST00000260653 FAM218AQ96MZ4 157 aa14.53□□□□□ -0.08
SIX3-201ENST00000260653 C9orf129Q5T035 196 aaKnown RBP14.53□□□□□ -0.08
SIX3-201ENST00000260653 TLX1NBP0CAT3 122 aa14.52□□□□□ -0.09
SIX3-201ENST00000260653 VPREB1P12018 145 aa14.52□□□□□ -0.09
SIX3-201ENST00000260653 PPDPFLQ8WWR9 84 aa14.52□□□□□ -0.09
SIX3-201ENST00000260653 KMT2AQ03164 3969 aa14.51□□□□□ -0.09
SIX3-201ENST00000260653 TRBV10-2A0A0K0K1G8 114 aa14.51□□□□□ -0.09
SIX3-201ENST00000260653 SLC25A20O43772 301 aa14.51□□□□□ -0.09
SIX3-201ENST00000260653 Q6ZRN7 208 aaPredicted RBP14.49□□□□□ -0.09
SIX3-201ENST00000260653 IGLV6-57P01721 117 aa14.48□□□□□ -0.09
SIX3-201ENST00000260653 WWC2-AS2Q96NR7 200 aa14.48□□□□□ -0.09
SIX3-201ENST00000260653 PKIGQ9Y2B9 76 aa14.47□□□□□ -0.09
SIX3-201ENST00000260653 TRBV10-3A0A0K0K1G6 114 aa14.46□□□□□ -0.09
SIX3-201ENST00000260653 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.46□□□□□ -0.1
SIX3-201ENST00000260653 A0A087WYN8 130 aa14.45□□□□□ -0.1
SIX3-201ENST00000260653 LRCOL1A6NCL2 159 aa14.45□□□□□ -0.1
SIX3-201ENST00000260653 CNBPP62633 177 aaKnown RBP14.45□□□□□ -0.1
SIX3-201ENST00000260653 H0YGX0 51 aa14.44□□□□□ -0.1
SIX3-201ENST00000260653 C6orf99Q4VX62 202 aa14.44□□□□□ -0.1
SIX3-201ENST00000260653 SERTAD4-AS1Q5TG53 156 aa14.44□□□□□ -0.1
SIX3-201ENST00000260653 ANKRD29Q8N6D5 301 aa14.44□□□□□ -0.1
SIX3-201ENST00000260653 TRACP01848 142 aa14.43□□□□□ -0.1
SIX3-201ENST00000260653 C14orf177Q52M58 125 aa14.43□□□□□ -0.1
SIX3-201ENST00000260653 C9orf153Q5TBE3 101 aa14.43□□□□□ -0.1
SIX3-201ENST00000260653 M0R378 163 aa14.42□□□□□ -0.1
SIX3-201ENST00000260653 Q5XG85 94 aa14.41□□□□□ -0.1
SIX3-201ENST00000260653 Q6ZR54 194 aa14.41□□□□□ -0.1
SIX3-201ENST00000260653 TEN1Q86WV5 123 aa14.41□□□□□ -0.1
SIX3-201ENST00000260653 FAM168BA1KXE4 195 aa14.41□□□□□ -0.1
SIX3-201ENST00000260653 FAM236AA0A1B0GUQ0 79 aa14.4□□□□□ -0.1
SIX3-201ENST00000260653 FAM236BA0A1B0GV22 79 aa14.4□□□□□ -0.1
SIX3-201ENST00000260653 LY6G6CO95867 125 aa14.39□□□□□ -0.11
SIX3-201ENST00000260653 TRAV23DV6A0A075B6W5 121 aa14.39□□□□□ -0.11
SIX3-201ENST00000260653 H3BT86 120 aa14.38□□□□□ -0.11
SIX3-201ENST00000260653 NKAPP1Q8N9T2 125 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms