RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CYSTM1Q9H1C7 97 aa10.03□□□□□ -0.8
TRAFD1-201ENST00000257604 J3KT08 172 aa10.03□□□□□ -0.8
TRAFD1-201ENST00000257604 TRACP01848 142 aa10.03□□□□□ -0.8
TRAFD1-201ENST00000257604 IGKV2-28A0A075B6P5 120 aa10.02□□□□□ -0.8
TRAFD1-201ENST00000257604 A0A087WZ39 114 aa10.02□□□□□ -0.8
TRAFD1-201ENST00000257604 IGKV2D-28P01615 120 aa10.02□□□□□ -0.8
TRAFD1-201ENST00000257604 SMIM11BQ8TCY0 68 aa10.02□□□□□ -0.81
TRAFD1-201ENST00000257604 HIGD2BQ4VC39 106 aa10.01□□□□□ -0.81
TRAFD1-201ENST00000257604 C3orf22Q8N5N4 141 aa10.01□□□□□ -0.81
TRAFD1-201ENST00000257604 HIST1H4AP62805 103 aaKnown RBP10□□□□□ -0.81
TRAFD1-201ENST00000257604 COPS9Q8WXC6 57 aa10□□□□□ -0.81
TRAFD1-201ENST00000257604 CCL18P55774 89 aa10□□□□□ -0.81
TRAFD1-201ENST00000257604 DEFB131BA0A096LNP1 70 aa9.99□□□□□ -0.81
TRAFD1-201ENST00000257604 C11orf45Q8TAV5 145 aa9.99□□□□□ -0.81
TRAFD1-201ENST00000257604 LYPD5Q6UWN5 251 aa9.98□□□□□ -0.81
TRAFD1-201ENST00000257604 IMUPQ9GZP8 106 aa9.98□□□□□ -0.81
TRAFD1-201ENST00000257604 TRAV13-2A0A0B4J235 113 aa9.98□□□□□ -0.81
TRAFD1-201ENST00000257604 INAFM2P0DMQ5 153 aa9.98□□□□□ -0.81
TRAFD1-201ENST00000257604 UNQ6190/PRO20217Q6UXQ8 127 aa9.98□□□□□ -0.81
TRAFD1-201ENST00000257604 LINC00846Q9NV44 126 aa9.98□□□□□ -0.81
TRAFD1-201ENST00000257604 A0A1B0GUV1 79 aa9.97□□□□□ -0.81
TRAFD1-201ENST00000257604 A0A1B0GX51 115 aa9.97□□□□□ -0.81
TRAFD1-201ENST00000257604 RPL28P46779 137 aaKnown RBP9.97□□□□□ -0.81
TRAFD1-201ENST00000257604 C10orf25Q5T742 122 aa9.97□□□□□ -0.81
TRAFD1-201ENST00000257604 UQCRQO14949 82 aa9.96□□□□□ -0.82
TRAFD1-201ENST00000257604 SPAG11BQ08648 103 aa9.96□□□□□ -0.82
TRAFD1-201ENST00000257604 LELP1Q5T871 98 aa9.96□□□□□ -0.82
TRAFD1-201ENST00000257604 CD164L2Q6UWJ8 174 aa9.96□□□□□ -0.82
TRAFD1-201ENST00000257604 XAGE1AQ9HD64 81 aa9.96□□□□□ -0.82
TRAFD1-201ENST00000257604 A0A0U1RQV1 116 aa9.95□□□□□ -0.82
TRAFD1-201ENST00000257604 IGKV2D-24A0A075B6R9 120 aa9.94□□□□□ -0.82
TRAFD1-201ENST00000257604 CXCL5P42830 114 aa9.93□□□□□ -0.82
TRAFD1-201ENST00000257604 ESRGQ1W209 222 aa9.93□□□□□ -0.82
TRAFD1-201ENST00000257604 FAM19A3Q7Z5A8 133 aa9.93□□□□□ -0.82
TRAFD1-201ENST00000257604 COX7CP15954 63 aa9.92□□□□□ -0.82
TRAFD1-201ENST00000257604 ENHOQ6UWT2 76 aa9.92□□□□□ -0.82
TRAFD1-201ENST00000257604 IBA57-AS1B1ANH7 110 aa9.91□□□□□ -0.82
TRAFD1-201ENST00000257604 C2orf48Q96LS8 159 aa9.91□□□□□ -0.82
TRAFD1-201ENST00000257604 TRAV23DV6A0A075B6W5 121 aa9.9□□□□□ -0.82
TRAFD1-201ENST00000257604 CSMD3Q7Z407 3707 aa9.9□□□□□ -0.83
TRAFD1-201ENST00000257604 Q8IZM0 81 aa9.89□□□□□ -0.83
TRAFD1-201ENST00000257604 ZNF561-AS1K7EIQ3 104 aa9.89□□□□□ -0.83
TRAFD1-201ENST00000257604 WIPF1O43516 503 aa9.87□□□□□ -0.83
TRAFD1-201ENST00000257604 OXTP01178 125 aa9.87□□□□□ -0.83
TRAFD1-201ENST00000257604 S100A7L2Q5SY68 101 aa9.87□□□□□ -0.83
TRAFD1-201ENST00000257604 FAM19A1Q7Z5A9 133 aa9.87□□□□□ -0.83
TRAFD1-201ENST00000257604 MDFIQ99750 246 aa9.87□□□□□ -0.83
TRAFD1-201ENST00000257604 KIAA0087Q14695 138 aa9.87□□□□□ -0.83
TRAFD1-201ENST00000257604 ATOX1O00244 68 aa9.86□□□□□ -0.83
TRAFD1-201ENST00000257604 RPL18AQ02543 176 aaKnown RBP9.86□□□□□ -0.83
TRAFD1-201ENST00000257604 LINC01561Q8N1V8 128 aa9.86□□□□□ -0.83
TRAFD1-201ENST00000257604 EGFEM1PQ0D2K5 195 aa9.86□□□□□ -0.83
TRAFD1-201ENST00000257604 H0YGX0 51 aa9.85□□□□□ -0.83
TRAFD1-201ENST00000257604 K7EIL1 84 aa9.85□□□□□ -0.83
TRAFD1-201ENST00000257604 CAMK2N2Q96S95 79 aa9.85□□□□□ -0.83
TRAFD1-201ENST00000257604 COL7A1Q02388 2944 aa9.85□□□□□ -0.83
TRAFD1-201ENST00000257604 USP17L23D6RBM5 183 aa9.84□□□□□ -0.83
TRAFD1-201ENST00000257604 ORMDL1Q9P0S3 153 aa9.84□□□□□ -0.83
TRAFD1-201ENST00000257604 Q8NDZ9 215 aa9.83□□□□□ -0.84
TRAFD1-201ENST00000257604 DPH3Q96FX2 82 aa9.83□□□□□ -0.84
TRAFD1-201ENST00000257604 CRYGAP11844 174 aa9.82□□□□□ -0.84
TRAFD1-201ENST00000257604 LINC00336Q6ZUF6 198 aa9.81□□□□□ -0.84
TRAFD1-201ENST00000257604 Q6JHZ5 121 aa9.81□□□□□ -0.84
TRAFD1-201ENST00000257604 M0R2N4 97 aa9.8□□□□□ -0.84
TRAFD1-201ENST00000257604 SCXQ7RTU7 201 aa9.8□□□□□ -0.84
TRAFD1-201ENST00000257604 C6orf99Q4VX62 202 aa9.79□□□□□ -0.84
TRAFD1-201ENST00000257604 OBSCN-AS1Q96MR7 158 aa9.79□□□□□ -0.84
TRAFD1-201ENST00000257604 CMYA5Q8N3K9 4069 aa9.79□□□□□ -0.84
TRAFD1-201ENST00000257604 FAM236DA0A1B0GTK5 79 aa9.79□□□□□ -0.84
TRAFD1-201ENST00000257604 FAM236CP0DP71 79 aa9.79□□□□□ -0.84
TRAFD1-201ENST00000257604 SERP2Q8N6R1 65 aa9.79□□□□□ -0.84
TRAFD1-201ENST00000257604 C6orf48Q9UBA6 75 aa9.79□□□□□ -0.84
TRAFD1-201ENST00000257604 GHRHP01286 108 aa9.78□□□□□ -0.84
TRAFD1-201ENST00000257604 Q6ZRU5 148 aa9.78□□□□□ -0.84
TRAFD1-201ENST00000257604 PRR34Q9NV39 138 aa9.78□□□□□ -0.84
TRAFD1-201ENST00000257604 HAMPP81172 84 aa9.77□□□□□ -0.84
TRAFD1-201ENST00000257604 C20orf197Q8N268 126 aa9.77□□□□□ -0.84
TRAFD1-201ENST00000257604 CCKP06307 115 aa9.77□□□□□ -0.85
TRAFD1-201ENST00000257604 CASC10Q5T4H9 136 aa9.77□□□□□ -0.85
TRAFD1-201ENST00000257604 LAMTOR3Q9UHA4 124 aa9.77□□□□□ -0.85
TRAFD1-201ENST00000257604 Q8N814 137 aa9.76□□□□□ -0.85
TRAFD1-201ENST00000257604 BRK1Q8WUW1 75 aa9.76□□□□□ -0.85
TRAFD1-201ENST00000257604 LINC00588Q9Y4M8 146 aa9.75□□□□□ -0.85
TRAFD1-201ENST00000257604 LYSTQ99698 3801 aa9.75□□□□□ -0.85
TRAFD1-201ENST00000257604 TRAV10A0A0B4J240 114 aa9.74□□□□□ -0.85
TRAFD1-201ENST00000257604 SEC61GP60059 68 aa9.74□□□□□ -0.85
TRAFD1-201ENST00000257604 UPK3BQ9BT76 320 aa9.74□□□□□ -0.85
TRAFD1-201ENST00000257604 Q5XG85 94 aa9.74□□□□□ -0.85
TRAFD1-201ENST00000257604 SNURFQ9Y675 71 aa9.73□□□□□ -0.85
TRAFD1-201ENST00000257604 TGP01266 2768 aa9.73□□□□□ -0.85
TRAFD1-201ENST00000257604 UBE2DNLQ8IWF7 75 aa9.72□□□□□ -0.85
TRAFD1-201ENST00000257604 TRBV10-3A0A0K0K1G6 114 aa9.71□□□□□ -0.85
TRAFD1-201ENST00000257604 C15orf56Q8N910 161 aa9.71□□□□□ -0.86
TRAFD1-201ENST00000257604 TMEM256-PLSCR3K7ERE1 68 aa9.7□□□□□ -0.86
TRAFD1-201ENST00000257604 COX17Q14061 63 aa9.69□□□□□ -0.86
TRAFD1-201ENST00000257604 JMJD7-PLA2G4BH0Y9G9 81 aa9.69□□□□□ -0.86
TRAFD1-201ENST00000257604 TMEM258P61165 79 aa9.69□□□□□ -0.86
TRAFD1-201ENST00000257604 UBL5Q9BZL1 73 aa9.68□□□□□ -0.86
TRAFD1-201ENST00000257604 LINC01556Q5JQF7 62 aa9.68□□□□□ -0.86
TRAFD1-201ENST00000257604 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms