RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Trav14n-3A0A075B645 120 aa6.82□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Gm20379A0A087WR34 119 aa6.82□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Gm17430F6RSK3 157 aa6.82□□□□□ -1.32
Bdnf-210ENSMUST00000111051 ColqO35348 457 aa6.82□□□□□ -1.32
Bdnf-210ENSMUST00000111051 P01630 113 aa6.82□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Hoxb2P0C1T1 354 aa6.82□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Prickle3Q80VL3 624 aa6.82□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Tmem97Q8VD00 176 aa6.82□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Tspo2Q9CRZ8 162 aa6.82□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Tmem160Q9D938 188 aa6.82□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Ighv1-7A0A075B5T7 117 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Gm5157A0A087WRH8 301 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Psmg4P0C7N9 123 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 AmelxP63277 210 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 CadB2RQC6 2225 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Tmem238lA0A1B0GS74 79 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Gm21983D6RFS9 131 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 3110082J24RikF6Z6Z2 108 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Ccl3P10855 92 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Ripply2Q2WG76 128 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Khdc1aQ3UWR2 166 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Zg16Q8K0C5 167 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Map1lc3aQ91VR7 121 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Necap2Q9D1J1 266 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 EppinQ9DA01 134 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Gm45753A0A1C7CYU8 86 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 1700084M14RikB1AT01 78 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Emp2O88662 172 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 P01783 136 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 P03980 138 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 A230072I06RikQ3UUJ8 172 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Sp5Q9JHX2 398 aa6.81□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Ighv7-4A0A0A6YXL5 121 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Olfr364-ps1A0A140T8Q2 307 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Dkk1O54908 272 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Ins1P01325 108 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 P04940 107 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 P04941 107 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 A930003A15RikQ3U552 87 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Cd52Q64389 74 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 MrapQ9D159 127 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Ighv7-3A0A075B5R2 120 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Zcchc24B2RVL6 241 aaKnown RBP6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 BC030500E9Q6W0 185 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Loxl1P97873 607 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Htr1dQ61224 374 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Rtn4rl2Q7M6Z0 420 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Slamf7Q8BHK6 333 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Zfp407G3UVV3 2246 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 PcntP48725 2898 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Olfr322Q5NCC8 327 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Vsig8Q6P3A4 417 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Wfdc21Q8BTE6 63 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Q9CQM1 111 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Fmc1Q9CR13 113 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Hyls1Q9CXX0 307 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Mlst8Q9DCJ1 326 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 PerpQ9JK95 193 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Crim1Q9JLL0 1037 aa6.8□□□□□ -1.32
Bdnf-210ENSMUST00000111051 A730046J19RikA0A1B0GSN8 89 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 P01659 112 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 P18526 117 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Gng4P50153 75 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Cks1brtQ3UNC9 96 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Chac2Q9CQG1 178 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Rpl11Q9CXW4 178 aaKnown RBP6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Ssbp2Q9CYZ8 361 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Ly6c1P0CW02 131 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 D630044L22RikQ8C701 164 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Bhlha15Q9QYC3 197 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Sec11aQ9R0P6 179 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Gvin1Q80SU7 2427 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Tns1E9Q0S6 1888 aaKnown RBP6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Trav7n-5A0A075B604 112 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 P01649 108 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Lypd6Q8BPP5 171 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Olfr975Q8VG91 310 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Nat6Q9R123 314 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Wdr90Q6ZPG2 1874 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Dnah12Q3V0Q1 3086 aa6.79□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Trav12-3A0A075B648 115 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Ighv8-6A0A0A6YXA3 118 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 H2-DMb1P35737 261 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Nkx3-1P97436 237 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Cox7a2lQ61387 111 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Ccl12Q62401 104 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Znrd1Q791N7 123 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Olfr1381Q7TQT4 311 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Olfr1373Q7TQT6 311 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Srd5a2Q99N99 254 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 PoleQ9WVF7 2283 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Rasl11aQ6IMB1 242 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Q9CQ90 155 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Tnfrsf23Q9ER63 176 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Dnajb12Q9QYI4 376 aaKnown RBP6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Npc2Q9Z0J0 149 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Trav16nA0A075B634 117 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Tmem29A2ANF5 204 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 Gm17660B9UIU9 90 aa6.78□□□□□ -1.32
Bdnf-210ENSMUST00000111051 NgfP01139 241 aa6.78□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms