RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Icam4Q9ERM2 262 aa9.27□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Lamtor2Q9JHS3 125 aa9.27□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Ighv8-6A0A0A6YXA3 118 aa9.27□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Zc2hc1aQ8BJH1 324 aa9.27□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Leprotl1Q9CQ74 131 aa9.27□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Ighv1-7A0A075B5T7 117 aa9.26□□□□□ -0.93
Col9a1-202ENSMUST00000088349 eef1akmt3D3YWP0 232 aa9.26□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Crip1P63254 77 aa9.26□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Ammecr1lQ8JZZ6 310 aa9.26□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Fam110aQ8R184 296 aa9.26□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Golt1bQ9CR60 138 aa9.26□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Ighv7-4A0A0A6YXL5 121 aa9.26□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Gm20458E9PXJ7 78 aa9.26□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Fbln7Q501P1 440 aa9.26□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Rnf182Q8C432 247 aa9.26□□□□□ -0.93
Col9a1-202ENSMUST00000088349 3100002H09RikQ9CXW6 140 aa9.26□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Dscaml1Q4VA61 2053 aa9.26□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Zfp950A0A0U1RQ46 609 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Ccl8Q9Z121 97 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Dopey2Q3UHQ6 2295 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Tcrg-C2A0A075B5Z2 167 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Trav4-4-dv10A0A075B651 110 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Trav23A0A0G2JG17 115 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Rhox7bA6PW38 321 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 NgfP01139 241 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 P01853 167 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Cox7a2lQ61387 111 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Gm10277Q6R5C6 214 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Zg16Q8K0C5 167 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Olfr481Q8VGI5 312 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Q9CR34 168 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Ube2v1Q9CZY3 147 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Fxyd4Q9D2W0 88 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Gm21874J3QNZ6 232 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Obox7Q4KL20 218 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Hes7Q8BKT2 225 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Olfr877Q8VF62 311 aa9.25□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Olfr1012Q8VFJ7 311 aa9.24□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Olfr477Q8VGI6 310 aa9.24□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Chd8Q09XV5 2582 aaKnown RBP9.24□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Ighv4-1A0A075B5R5 116 aa9.24□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Gm6096D3YTY6 151 aa9.24□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Cd27P41272 250 aa9.24□□□□□ -0.93
Col9a1-202ENSMUST00000088349 C330021F23RikQ8C7T0 141 aa9.24□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Tmem126aQ9D8Y1 196 aa9.24□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Trav9d-1A0A075B699 112 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Gm45623A0A1B0GSF6 103 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Gm15056F6ZR08 88 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 P01793 123 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Icam2P35330 277 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 NpyP57774 97 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 SeleQ00690 612 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Ang4Q3TMQ6 144 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Znf787Q8BIF9 381 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Rnase2aQ8K196 155 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Ighv5-16A0A0B4J1P4 117 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Rnf212bD3Z423 297 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Myod1P10085 318 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 SrstQ06666 185 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 AdipoqQ60994 247 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Stpg2Q8C8J0 561 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Znhit3Q9CQK1 151 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Csmd2V9GX34 3611 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Gm765B2RVL9 189 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Scgb1b19F6WYW0 93 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Cxcl13O55038 109 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Mamld1P0C6A2 803 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Bsph1Q3UW26 133 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Ang6Q5GAN0 147 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Snrnp40Q6PE01 358 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Gm12689Q8BQU9 117 aa9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Tppp3Q9CRB6 176 aaKnown RBP9.23□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Trav7-1A0A0G2JEV5 112 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 1700003H04RikE9PXM2 192 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Gm3512L7N206 146 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Oosp2Q4FZG8 168 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Trappc1Q5NCF2 145 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Olfr433Q7TRV9 314 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Fam206aQ80ZQ9 193 aaKnown RBP9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Tmem30bQ8BHG3 353 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Npc2Q9Z0J0 149 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Trbv26A0A0B4J1P5 115 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Vmn1r60G3UY47 300 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Ighv3-6P18531 116 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Psg25Q497W1 475 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Olfr1381Q7TQT4 311 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Olfr1373Q7TQT6 311 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Slamf7Q8BHK6 333 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Tmem189Q99LQ7 271 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Tmem52Q9D702 196 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 EsdQ9R0P3 282 aa9.22□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Trbv31A0A075B5J5 111 aa9.21□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Gm45213A0A0U1RNZ6 101 aa9.21□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Saa4P31532 130 aa9.21□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Fabp6P51162 128 aa9.21□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Tmem177Q8BPE4 311 aa9.21□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Olfr1256Q8VGP1 306 aa9.21□□□□□ -0.93
Col9a1-202ENSMUST00000088349 Trav14-3A0A075B607 120 aa9.21□□□□□ -0.94
Col9a1-202ENSMUST00000088349 Defa35E9QLQ1 93 aa9.21□□□□□ -0.94
Col9a1-202ENSMUST00000088349 Defa6P50704 93 aa9.21□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms