RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Uqcrfs1Q9CR68 274 aa6.84□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 ChtopQ9CY57 249 aaKnown RBP6.84□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Ighv6-3A0A075B5T2 118 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Plcxd2B2RXA1 340 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Thap8E9Q695 213 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 H2al1nQ497L1 109 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Piezo2Q8CD54 2822 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Scgb1b11A0A087WQJ0 93 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Cnot1Q6ZQ08 2375 aaKnown RBP6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Gng4P50153 75 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Snrpd3P62320 126 aaKnown RBP6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Siglec12Q91Y57 467 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Ifitm2Q99J93 144 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 4930544G11RikQ9CR99 193 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Usp34Q6ZQ93 3582 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Igkv14-130A0A0G2JF45 117 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 DdtO35215 118 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Ypel3P61237 119 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Dlx6P70397 175 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Znf48Q3US17 591 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Ccl12Q62401 104 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Olfr211Q8VGH2 309 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Gm15128A2ADW8 449 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Gm15080A2BI02 449 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Gm15093A2BI72 449 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Luzp4B1AV09 449 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Gm15107B1B0X0 449 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Foxi3E0CZH3 425 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Gm15097E9QA14 449 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Gm10130F6ZHM5 101 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Defa3P28310 93 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Defa10P50708 93 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Defa15P50713 93 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Gm15085Q62012 449 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Pygo1Q9D0P5 417 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Foxj2Q9ES18 565 aa6.83□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 PcntP48725 2898 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Trav7n-4A0A075B620 113 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 LalbaP29752 143 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Olfr1192-ps1A0A1L1SRD7 309 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Scgb1b3J3QJY4 93 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Nutf2P61971 127 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Map6d1Q14BB9 191 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 D130052B06RikQ3UW13 202 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Olfr904Q7TRC9 310 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Tmem139E9PX92 214 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Atp5iQ06185 71 aaKnown RBP6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Tcf15Q60756 195 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Mzt1Q8BUR9 78 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Tmem219Q9D123 240 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Npc2Q9Z0J0 149 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Ovol2Q8CIV7 274 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Scnm1Q8K136 229 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 HttP42859 3119 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Trav16A0A075B653 116 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Trbv17A0A140T8P8 114 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Smad7O35253 426 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Cited1P97769 203 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Olfr150Q60895 312 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Gng5Q80SZ7 68 aa6.82□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Bsph2Q0Q236 131 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Olfr33Q8VGX7 318 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Ighv7-3A0A075B5R2 120 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Gm15127B1AVZ5 449 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Gm15091B1AZM2 449 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Gm5150Q1AN92 299 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Slc35d2Q762D5 326 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 P01726 129 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Trappc1Q5NCF2 145 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Try10Q792Z1 246 aaKnown RBP6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Olfr810Q8VFH9 312 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 CrebbpP45481 2441 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Ighv1-20A0A0A6YX66 117 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Zfp950A0A0U1RQ46 609 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Zfp114B2RRA8 586 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Tmem95P0DJF3 176 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Gm10842Q3U587 122 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Tmem189Q99LQ7 271 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Stpg1Q9D2F5 341 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Sox15P43267 231 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Znrd1Q791N7 123 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Lypd1Q8BLC3 141 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Tusc5Q8C838 173 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Leprotl1Q9CQ74 131 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Pam16Q9CQV1 125 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Gpr35Q9ES90 307 aa6.81□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Trdv1A0A075B657 112 aa6.8□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Tcf21O35437 179 aa6.8□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Zfp36l1P23950 338 aa6.8□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Adrb3P25962 400 aa6.8□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Cacng7P62956 275 aa6.8□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Ypel4Q65Z93 127 aa6.8□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Tmem140Q8BGY5 185 aa6.8□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Gm5868Q8BJG1 145 aa6.8□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Slc25a48Q8BW66 306 aa6.8□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Tbx19Q99ME7 446 aa6.8□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 AmtnQ9D3J8 213 aa6.8□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Cnn3Q9DAW9 330 aaKnown RBP6.8□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Fbln7Q501P1 440 aa6.8□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 PpoxP51175 477 aa6.8□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms