RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 B1ARW8 110 aa13.06□□□□□ -0.32
Shh-201ENSMUST00000002708 NpyP57774 97 aa13.06□□□□□ -0.32
Shh-201ENSMUST00000002708 Ash1lQ99MY8 2958 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 Trav4-4-dv10A0A075B651 110 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 Tmem116A0A0G2JGD3 401 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 RprmlQ3URD2 117 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 Ppp1r3cQ7TMB3 317 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 Wfdc21Q8BTE6 63 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 Tmem52Q9D702 196 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 1700008P02RikQ9DAJ8 175 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 Fam213bQ9DB60 201 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 Vma21-psA0A140T8R2 101 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 IgipA0A1B0GR74 53 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 Gm3072F6SKY8 209 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 Gm20481G3UXK4 153 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 Lcn2P11672 200 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 Oosp2Q4FZG8 168 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 Rnf182Q8C432 247 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 OtosQ8R448 89 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 Chac2Q9CQG1 178 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 Cmya5Q70KF4 3739 aa13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 CenpeQ6RT24 2474 aaKnown RBP13.05□□□□□ -0.32
Shh-201ENSMUST00000002708 Rtl10D3YWW5 146 aa13.04□□□□□ -0.32
Shh-201ENSMUST00000002708 Vmn1r195Q5SVD6 316 aa13.04□□□□□ -0.32
Shh-201ENSMUST00000002708 Slc25a16Q8C0K5 332 aa13.04□□□□□ -0.32
Shh-201ENSMUST00000002708 Nit1Q8VDK1 323 aa13.04□□□□□ -0.32
Shh-201ENSMUST00000002708 Fbln7Q501P1 440 aa13.04□□□□□ -0.32
Shh-201ENSMUST00000002708 Olfr481Q8VGI5 312 aa13.04□□□□□ -0.32
Shh-201ENSMUST00000002708 Trav9d-1A0A075B699 112 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Scgb1b11A0A087WQJ0 93 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Mrps21P58059 87 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 V1rd19Q3KNP5 305 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Vps25Q9CQ80 176 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Lamtor2Q9JHS3 125 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Ighv14-3A0A075B5R9 117 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Gm28305F6U473 122 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 P01793 123 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Dnajc30P59041 219 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Q24JP4 165 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Hes7Q8BKT2 225 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Olfr1242Q8VGM6 306 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Tcrg-C2A0A075B5Z2 167 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Gm20458E9PXJ7 78 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Gm21874J3QNZ6 232 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Gm26965M0QWH4 86 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Fgfbp1O70514 251 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 P01853 167 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Myod1P10085 318 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 LoxP28301 411 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 RbpjP31266 526 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 HrkP62816 92 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 SeleQ00690 612 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Cox7a2lQ61387 111 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Rnf24Q8BGI1 148 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Defa22Q8C1N8 93 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Obp2aQ8K1H9 176 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Vstm5Q9D806 199 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Zfp53Q9Z117 652 aa13.03□□□□□ -0.32
Shh-201ENSMUST00000002708 Olfr1381Q7TQT4 311 aa13.02□□□□□ -0.33
Shh-201ENSMUST00000002708 Olfr1373Q7TQT6 311 aa13.02□□□□□ -0.33
Shh-201ENSMUST00000002708 Lyzl1Q9CPX3 148 aa13.02□□□□□ -0.33
Shh-201ENSMUST00000002708 Leprotl1Q9CQ74 131 aa13.02□□□□□ -0.33
Shh-201ENSMUST00000002708 Golt1bQ9CR60 138 aa13.02□□□□□ -0.33
Shh-201ENSMUST00000002708 Ttc32Q9DAC7 148 aa13.02□□□□□ -0.33
Shh-201ENSMUST00000002708 Ighv7-4A0A0A6YXL5 121 aa13.02□□□□□ -0.33
Shh-201ENSMUST00000002708 Trav7-1A0A0G2JEV5 112 aa13.02□□□□□ -0.33
Shh-201ENSMUST00000002708 Mc5rP41149 325 aa13.02□□□□□ -0.33
Shh-201ENSMUST00000002708 Gm9958Q8C9U4 106 aa13.02□□□□□ -0.33
Shh-201ENSMUST00000002708 Iba57Q8CAK1 358 aaKnown RBP13.02□□□□□ -0.33
Shh-201ENSMUST00000002708 Scnm1Q8K136 229 aa13.02□□□□□ -0.33
Shh-201ENSMUST00000002708 Dazap1Q9JII5 406 aaKnown RBP13.02□□□□□ -0.33
Shh-201ENSMUST00000002708 Ang6Q5GAN0 147 aa13.01□□□□□ -0.33
Shh-201ENSMUST00000002708 Ccl12Q62401 104 aa13.01□□□□□ -0.33
Shh-201ENSMUST00000002708 Ttc9cQ810A3 171 aa13.01□□□□□ -0.33
Shh-201ENSMUST00000002708 Ammecr1lQ8JZZ6 310 aa13.01□□□□□ -0.33
Shh-201ENSMUST00000002708 CompQ9R0G6 755 aa13.01□□□□□ -0.33
Shh-201ENSMUST00000002708 Trav7n-5A0A075B604 112 aa13.01□□□□□ -0.33
Shh-201ENSMUST00000002708 Icam2P35330 277 aa13.01□□□□□ -0.33
Shh-201ENSMUST00000002708 Olfr433Q7TRV9 314 aa13.01□□□□□ -0.33
Shh-201ENSMUST00000002708 Slamf7Q8BHK6 333 aa13.01□□□□□ -0.33
Shh-201ENSMUST00000002708 C1qtnf4Q8R066 326 aa13.01□□□□□ -0.33
Shh-201ENSMUST00000002708 Ube2v1Q9CZY3 147 aa13.01□□□□□ -0.33
Shh-201ENSMUST00000002708 Lyg1Q9D7Q0 197 aa13.01□□□□□ -0.33
Shh-201ENSMUST00000002708 Trbv31A0A075B5J5 111 aa13□□□□□ -0.33
Shh-201ENSMUST00000002708 Trav14-3A0A075B607 120 aa13□□□□□ -0.33
Shh-201ENSMUST00000002708 D930048N14RikA2AA67 225 aa13□□□□□ -0.33
Shh-201ENSMUST00000002708 Ovol3D3YYM0 189 aa13□□□□□ -0.33
Shh-201ENSMUST00000002708 Gm26566Q8CAC1 153 aa13□□□□□ -0.33
Shh-201ENSMUST00000002708 Olfr211Q8VGH2 309 aa13□□□□□ -0.33
Shh-201ENSMUST00000002708 Ighv4-1A0A075B5R5 116 aa13□□□□□ -0.33
Shh-201ENSMUST00000002708 Ighv5-16A0A0B4J1P4 117 aa13□□□□□ -0.33
Shh-201ENSMUST00000002708 Gm9733Q1AN91 178 aa13□□□□□ -0.33
Shh-201ENSMUST00000002708 Gm4792Q569Q2 183 aa13□□□□□ -0.33
Shh-201ENSMUST00000002708 Klk10Q99M20 278 aa13□□□□□ -0.33
Shh-201ENSMUST00000002708 Gm20379A0A087WR34 119 aa12.99□□□□□ -0.33
Shh-201ENSMUST00000002708 Onecut1O08755 465 aa12.99□□□□□ -0.33
Shh-201ENSMUST00000002708 Saa4P31532 130 aa12.99□□□□□ -0.33
Shh-201ENSMUST00000002708 Rbx1P62878 108 aa12.99□□□□□ -0.33
Shh-201ENSMUST00000002708 Psg25Q497W1 475 aa12.99□□□□□ -0.33
Shh-201ENSMUST00000002708 A730015C16RikQ8C992 119 aa12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 77.4 ms