RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 DEFB130BP0DP73 79 aa7.58□□□□□ -1.2
SNIP1-204ENST00000638725 DEFB130AP0DP74 79 aa7.58□□□□□ -1.2
SNIP1-204ENST00000638725 A0A087WVE0 104 aa7.58□□□□□ -1.2
SNIP1-204ENST00000638725 LY6G6DO95868 133 aa7.58□□□□□ -1.2
SNIP1-204ENST00000638725 SS18Q15532 418 aa7.58□□□□□ -1.2
SNIP1-204ENST00000638725 ATOX1O00244 68 aa7.57□□□□□ -1.2
SNIP1-204ENST00000638725 CMC4P56277 68 aaPredicted RBP7.57□□□□□ -1.2
SNIP1-204ENST00000638725 Q6JHZ5 121 aa7.57□□□□□ -1.2
SNIP1-204ENST00000638725 IGLV1-51P01701 117 aa7.57□□□□□ -1.2
SNIP1-204ENST00000638725 ORMDL1Q9P0S3 153 aa7.57□□□□□ -1.2
SNIP1-204ENST00000638725 NF1P21359 2839 aa7.57□□□□□ -1.2
SNIP1-204ENST00000638725 NIPBLQ6KC79 2804 aaeCLIP7.57□□□□□ -1.2
SNIP1-204ENST00000638725 ZNF462Q96JM2 2506 aa7.56□□□□□ -1.2
SNIP1-204ENST00000638725 PRR3P79522 188 aaKnown RBP7.56□□□□□ -1.2
SNIP1-204ENST00000638725 RPL18AQ02543 176 aaKnown RBP7.56□□□□□ -1.2
SNIP1-204ENST00000638725 A0A096LPF7 62 aa7.55□□□□□ -1.2
SNIP1-204ENST00000638725 GYPEP15421 78 aa7.55□□□□□ -1.2
SNIP1-204ENST00000638725 LINC01006Q8NI28 216 aa7.55□□□□□ -1.2
SNIP1-204ENST00000638725 SETD2Q9BYW2 2564 aaPredicted RBP7.55□□□□□ -1.2
SNIP1-204ENST00000638725 A0A1B0GX51 115 aa7.55□□□□□ -1.2
SNIP1-204ENST00000638725 hADV29S1A0JD25 119 aa7.55□□□□□ -1.2
SNIP1-204ENST00000638725 NANOS2P60321 138 aaKnown RBP7.55□□□□□ -1.2
SNIP1-204ENST00000638725 CYSTM1Q9H1C7 97 aa7.55□□□□□ -1.2
SNIP1-204ENST00000638725 ZFYVE26Q68DK2 2539 aa7.54□□□□□ -1.2
SNIP1-204ENST00000638725 CRYGAP11844 174 aa7.54□□□□□ -1.2
SNIP1-204ENST00000638725 Q8IZM0 81 aa7.54□□□□□ -1.2
SNIP1-204ENST00000638725 WFDC11Q8NEX6 87 aa7.54□□□□□ -1.2
SNIP1-204ENST00000638725 LINC01561Q8N1V8 128 aa7.54□□□□□ -1.2
SNIP1-204ENST00000638725 BBC3Q96PG8 261 aaPredicted RBP7.54□□□□□ -1.2
SNIP1-204ENST00000638725 LOC107984640A0A0U1RRK4 108 aa7.53□□□□□ -1.2
SNIP1-204ENST00000638725 CCKP06307 115 aa7.53□□□□□ -1.2
SNIP1-204ENST00000638725 A0A1B0GUV1 79 aa7.52□□□□□ -1.21
SNIP1-204ENST00000638725 Q8N814 137 aa7.52□□□□□ -1.21
SNIP1-204ENST00000638725 LINC00167Q96N53 147 aa7.52□□□□□ -1.21
SNIP1-204ENST00000638725 ITPR3Q14573 2671 aa7.52□□□□□ -1.21
SNIP1-204ENST00000638725 FN1P02751 2386 aaKnown RBP7.52□□□□□ -1.21
SNIP1-204ENST00000638725 USP17L23D6RBM5 183 aa7.51□□□□□ -1.21
SNIP1-204ENST00000638725 KIR2DL5BQ8NHK3 375 aa7.51□□□□□ -1.21
SNIP1-204ENST00000638725 CCDC168Q8NDH2 2452 aa7.51□□□□□ -1.21
SNIP1-204ENST00000638725 C9orf116Q5BN46 136 aaPredicted RBP7.51□□□□□ -1.21
SNIP1-204ENST00000638725 KIAA0087Q14695 138 aa7.5□□□□□ -1.21
SNIP1-204ENST00000638725 Q8N3U1 123 aa7.5□□□□□ -1.21
SNIP1-204ENST00000638725 IGLV10-54A0A075B6I4 117 aa7.5□□□□□ -1.21
SNIP1-204ENST00000638725 LINC00269Q8N2A0 174 aa7.5□□□□□ -1.21
SNIP1-204ENST00000638725 SERP2Q8N6R1 65 aa7.5□□□□□ -1.21
SNIP1-204ENST00000638725 LINC00612Q8N6U2 182 aa7.5□□□□□ -1.21
SNIP1-204ENST00000638725 HILS1P60008 231 aa7.49□□□□□ -1.21
SNIP1-204ENST00000638725 Q8NDZ9 215 aa7.49□□□□□ -1.21
SNIP1-204ENST00000638725 WFDC9Q8NEX5 89 aa7.49□□□□□ -1.21
SNIP1-204ENST00000638725 JMJD7-PLA2G4BH0Y9G9 81 aa7.49□□□□□ -1.21
SNIP1-204ENST00000638725 RNASE1P07998 156 aaKnown RBP7.48□□□□□ -1.21
SNIP1-204ENST00000638725 UPK3BQ9BT76 320 aa7.48□□□□□ -1.21
SNIP1-204ENST00000638725 PRO0255Q9UI72 69 aa7.48□□□□□ -1.21
SNIP1-204ENST00000638725 APCP25054 2843 aa7.48□□□□□ -1.21
SNIP1-204ENST00000638725 UBR5O95071 2799 aaPredicted RBP7.48□□□□□ -1.21
SNIP1-204ENST00000638725 TMEM256-PLSCR3K7ERE1 68 aa7.48□□□□□ -1.21
SNIP1-204ENST00000638725 NDUFC2O95298 119 aa7.48□□□□□ -1.21
SNIP1-204ENST00000638725 C6orf99Q4VX62 202 aa7.48□□□□□ -1.21
SNIP1-204ENST00000638725 CHCHD10Q8WYQ3 142 aaPredicted RBP7.48□□□□□ -1.21
SNIP1-204ENST00000638725 C16orf95Q9H693 158 aa7.48□□□□□ -1.21
SNIP1-204ENST00000638725 J3KT08 172 aa7.48□□□□□ -1.21
SNIP1-204ENST00000638725 CD164L2Q6UWJ8 174 aa7.48□□□□□ -1.21
SNIP1-204ENST00000638725 ZNF843Q8N446 348 aa7.48□□□□□ -1.21
SNIP1-204ENST00000638725 X6R8D5 127 aa7.48□□□□□ -1.21
SNIP1-204ENST00000638725 FLNAP21333 2647 aaKnown RBP7.46□□□□□ -1.21
SNIP1-204ENST00000638725 ANGP03950 147 aaKnown RBP7.46□□□□□ -1.21
SNIP1-204ENST00000638725 COX17Q14061 63 aa7.46□□□□□ -1.22
SNIP1-204ENST00000638725 S100A7L2Q5SY68 101 aa7.46□□□□□ -1.22
SNIP1-204ENST00000638725 FAM19A1Q7Z5A9 133 aa7.46□□□□□ -1.22
SNIP1-204ENST00000638725 USP24Q9UPU5 2620 aa7.45□□□□□ -1.22
SNIP1-204ENST00000638725 DEFB4AO15263 64 aa7.45□□□□□ -1.22
SNIP1-204ENST00000638725 REG3AQ06141 175 aa7.45□□□□□ -1.22
SNIP1-204ENST00000638725 KRTAP1-1Q07627 177 aa7.45□□□□□ -1.22
SNIP1-204ENST00000638725 ENHOQ6UWT2 76 aa7.45□□□□□ -1.22
SNIP1-204ENST00000638725 FAM19A5Q7Z5A7 132 aaPredicted RBP7.44□□□□□ -1.22
SNIP1-204ENST00000638725 TRAV23DV6A0A075B6W5 121 aa7.44□□□□□ -1.22
SNIP1-204ENST00000638725 IGHV4-28A0A0C4DH34 117 aa7.44□□□□□ -1.22
SNIP1-204ENST00000638725 C10orf25Q5T742 122 aa7.44□□□□□ -1.22
SNIP1-204ENST00000638725 GHRHP01286 108 aa7.43□□□□□ -1.22
SNIP1-204ENST00000638725 ATP5EP2Q5VTU8 51 aa7.43□□□□□ -1.22
SNIP1-204ENST00000638725 LINC00575Q6W349 94 aa7.43□□□□□ -1.22
SNIP1-204ENST00000638725 C6orf223Q8N319 242 aa7.43□□□□□ -1.22
SNIP1-204ENST00000638725 TMEM258P61165 79 aa7.43□□□□□ -1.22
SNIP1-204ENST00000638725 ANK3Q12955 4377 aaKnown RBP7.43□□□□□ -1.22
SNIP1-204ENST00000638725 ACANP16112 2415 aa7.43□□□□□ -1.22
SNIP1-204ENST00000638725 C5orf47Q569G3 176 aa7.42□□□□□ -1.22
SNIP1-204ENST00000638725 LYPD5Q6UWN5 251 aa7.42□□□□□ -1.22
SNIP1-204ENST00000638725 LINC00482Q8N8I6 264 aa7.42□□□□□ -1.22
SNIP1-204ENST00000638725 UBL5Q9BZL1 73 aa7.42□□□□□ -1.22
SNIP1-204ENST00000638725 MTORP42345 2549 aa7.42□□□□□ -1.22
SNIP1-204ENST00000638725 UNQ6190/PRO20217Q6UXQ8 127 aa7.42□□□□□ -1.22
SNIP1-204ENST00000638725 M0R2N4 97 aa7.42□□□□□ -1.22
SNIP1-204ENST00000638725 DPH3Q96FX2 82 aa7.42□□□□□ -1.22
SNIP1-204ENST00000638725 DSCR8Q96T75 97 aa7.42□□□□□ -1.22
SNIP1-204ENST00000638725 NBEAL2Q6ZNJ1 2754 aa7.41□□□□□ -1.22
SNIP1-204ENST00000638725 KRTAP10-3P60369 221 aa7.41□□□□□ -1.22
SNIP1-204ENST00000638725 RPS28P62857 69 aaKnown RBP7.41□□□□□ -1.22
SNIP1-204ENST00000638725 SPATA3Q8NHX4 192 aa7.41□□□□□ -1.22
SNIP1-204ENST00000638725 GCN1Q92616 2671 aaKnown RBP7.41□□□□□ -1.22
SNIP1-204ENST00000638725 SMIM9A6NGZ8 99 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms