RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 CDKN2A-AS1Q9UH64 79 aa12.15□□□□□ -0.46
CLN6-222ENST00000637667 GEMIN7Q9H840 131 aaKnown RBP12.14□□□□□ -0.47
CLN6-222ENST00000637667 ADCYAP1P18509 176 aa12.13□□□□□ -0.47
CLN6-222ENST00000637667 LINC00469Q8N7U9 141 aa12.12□□□□□ -0.47
CLN6-222ENST00000637667 RNF213Q63HN8 5207 aa12.12□□□□□ -0.47
CLN6-222ENST00000637667 TRAV9-1A0A075B6T8 112 aa12.11□□□□□ -0.47
CLN6-222ENST00000637667 UQCC3Q6UW78 93 aa12.11□□□□□ -0.47
CLN6-222ENST00000637667 SCGB3A1Q96QR1 104 aa12.11□□□□□ -0.47
CLN6-222ENST00000637667 IGLV1-50A0A075B6I6 118 aa12.1□□□□□ -0.47
CLN6-222ENST00000637667 TMEM218A2RU14 115 aa12.1□□□□□ -0.47
CLN6-222ENST00000637667 F8VRH5 84 aa12.1□□□□□ -0.47
CLN6-222ENST00000637667 KRTAP1-4P0C5Y4 121 aa12.1□□□□□ -0.47
CLN6-222ENST00000637667 ERASQ7Z444 233 aa12.1□□□□□ -0.47
CLN6-222ENST00000637667 XAGE1AQ9HD64 81 aa12.1□□□□□ -0.47
CLN6-222ENST00000637667 C22orf24Q9Y442 160 aa12.09□□□□□ -0.47
CLN6-222ENST00000637667 CXCL5P42830 114 aa12.08□□□□□ -0.48
CLN6-222ENST00000637667 LBHQ53QV2 105 aaPredicted RBP12.07□□□□□ -0.48
CLN6-222ENST00000637667 SMIM1B2RUZ4 78 aa12.06□□□□□ -0.48
CLN6-222ENST00000637667 GNB1LQ9BYB4 327 aa12.06□□□□□ -0.48
CLN6-222ENST00000637667 TINCRA0A1B0GVN0 87 aa12.05□□□□□ -0.48
CLN6-222ENST00000637667 LINC01546A6NGU7 62 aa12.05□□□□□ -0.48
CLN6-222ENST00000637667 LINC01549A6NIU2 74 aa12.05□□□□□ -0.48
CLN6-222ENST00000637667 ZNF861PO60384 105 aa12.05□□□□□ -0.48
CLN6-222ENST00000637667 S100PP25815 95 aa12.05□□□□□ -0.48
CLN6-222ENST00000637667 IGLV5-45A0A087WSX0 123 aa12.04□□□□□ -0.48
CLN6-222ENST00000637667 NUPR1O60356 82 aa12.04□□□□□ -0.48
CLN6-222ENST00000637667 PDZD11Q5EBL8 140 aa12.04□□□□□ -0.48
CLN6-222ENST00000637667 SEC11CQ9BY50 192 aa12.04□□□□□ -0.48
CLN6-222ENST00000637667 TP73-AS1Q9UF72 201 aa12.04□□□□□ -0.48
CLN6-222ENST00000637667 IFITM2Q01629 132 aa12.03□□□□□ -0.48
CLN6-222ENST00000637667 COX7B2Q8TF08 81 aa12.03□□□□□ -0.48
CLN6-222ENST00000637667 CST9LQ9H4G1 147 aa12.03□□□□□ -0.48
CLN6-222ENST00000637667 RPL13AP40429 203 aaKnown RBP12.02□□□□□ -0.49
CLN6-222ENST00000637667 MRPL55Q7Z7F7 128 aaKnown RBP12.02□□□□□ -0.49
CLN6-222ENST00000637667 COX19Q49B96 90 aa12.01□□□□□ -0.49
CLN6-222ENST00000637667 FA2HQ7L5A8 372 aa12.01□□□□□ -0.49
CLN6-222ENST00000637667 PMVKQ15126 192 aa12□□□□□ -0.49
CLN6-222ENST00000637667 CARHSP1Q9Y2V2 147 aaKnown RBP12□□□□□ -0.49
CLN6-222ENST00000637667 SPINK8P0C7L1 97 aa11.99□□□□□ -0.49
CLN6-222ENST00000637667 FABP9Q0Z7S8 132 aa11.99□□□□□ -0.49
CLN6-222ENST00000637667 LPAP08519 4548 aa11.98□□□□□ -0.49
CLN6-222ENST00000637667 MRPL18Q9H0U6 180 aaKnown RBP11.98□□□□□ -0.49
CLN6-222ENST00000637667 SMCO4Q9NRQ5 59 aa11.98□□□□□ -0.49
CLN6-222ENST00000637667 BCE1O60756 84 aa11.97□□□□□ -0.49
CLN6-222ENST00000637667 RPL28P46779 137 aaKnown RBP11.96□□□□□ -0.49
CLN6-222ENST00000637667 COMMD7Q86VX2 200 aa11.96□□□□□ -0.49
CLN6-222ENST00000637667 LINC00167Q96N53 147 aa11.96□□□□□ -0.49
CLN6-222ENST00000637667 H3BRM9 83 aa11.95□□□□□ -0.5
CLN6-222ENST00000637667 RAB5BP61020 215 aa11.95□□□□□ -0.5
CLN6-222ENST00000637667 RPL37AP8A6NKH3 93 aa11.94□□□□□ -0.5
CLN6-222ENST00000637667 IGLV5-37A0A075B6J1 123 aa11.93□□□□□ -0.5
CLN6-222ENST00000637667 GAGE10A6NGK3 116 aa11.93□□□□□ -0.5
CLN6-222ENST00000637667 RHEBQ15382 184 aa11.93□□□□□ -0.5
CLN6-222ENST00000637667 C10orf91Q5T1B1 145 aa11.93□□□□□ -0.5
CLN6-222ENST00000637667 RPS10P5Q9NQ39 176 aa11.93□□□□□ -0.5
CLN6-222ENST00000637667 ATP5LO75964 103 aa11.92□□□□□ -0.5
CLN6-222ENST00000637667 IGLC3P0DOY3 106 aa11.92□□□□□ -0.5
CLN6-222ENST00000637667 NKAPP1Q8N9T2 125 aa11.91□□□□□ -0.5
CLN6-222ENST00000637667 A0A096LNJ9 63 aa11.9□□□□□ -0.5
CLN6-222ENST00000637667 IGLV5-39A0A0G2JS06 123 aa11.9□□□□□ -0.5
CLN6-222ENST00000637667 NDUFA6P56556 154 aa11.9□□□□□ -0.5
CLN6-222ENST00000637667 PRR4Q16378 134 aa11.89□□□□□ -0.51
CLN6-222ENST00000637667 A0A087X002 238 aa11.88□□□□□ -0.51
CLN6-222ENST00000637667 ZNF22P17026 224 aaPredicted RBP11.88□□□□□ -0.51
CLN6-222ENST00000637667 URB1-AS1Q96HZ7 61 aa11.88□□□□□ -0.51
CLN6-222ENST00000637667 PFN2P35080 140 aa11.87□□□□□ -0.51
CLN6-222ENST00000637667 C18orf32Q8TCD1 76 aa11.87□□□□□ -0.51
CLN6-222ENST00000637667 TRAPPC1Q9Y5R8 145 aa11.87□□□□□ -0.51
CLN6-222ENST00000637667 HBDP02042 147 aa11.86□□□□□ -0.51
CLN6-222ENST00000637667 LINC00614P0C842 121 aa11.86□□□□□ -0.51
CLN6-222ENST00000637667 CRYGAP11844 174 aa11.86□□□□□ -0.51
CLN6-222ENST00000637667 UBE2AP49459 152 aa11.86□□□□□ -0.51
CLN6-222ENST00000637667 KRTAP13-1Q8IUC0 172 aa11.86□□□□□ -0.51
CLN6-222ENST00000637667 SCO1O75880 301 aa11.85□□□□□ -0.51
CLN6-222ENST00000637667 TSPAN13O95857 204 aa11.84□□□□□ -0.51
CLN6-222ENST00000637667 PMCHL1Q16048 86 aa11.84□□□□□ -0.51
CLN6-222ENST00000637667 ERG28Q9UKR5 140 aa11.84□□□□□ -0.51
CLN6-222ENST00000637667 IGKV2-28A0A075B6P5 120 aa11.83□□□□□ -0.52
CLN6-222ENST00000637667 IGKV2D-28P01615 120 aa11.83□□□□□ -0.52
CLN6-222ENST00000637667 TYMSOSQ8TAI1 123 aa11.83□□□□□ -0.52
CLN6-222ENST00000637667 SND1-IT1Q9HBX3 110 aa11.83□□□□□ -0.52
CLN6-222ENST00000637667 VPREB1P12018 145 aa11.82□□□□□ -0.52
CLN6-222ENST00000637667 ANAPC11Q9NYG5 84 aa11.82□□□□□ -0.52
CLN6-222ENST00000637667 C11orf86A6NJI1 115 aa11.81□□□□□ -0.52
CLN6-222ENST00000637667 BAGE3Q86Y29 109 aa11.81□□□□□ -0.52
CLN6-222ENST00000637667 COX17Q14061 63 aa11.8□□□□□ -0.52
CLN6-222ENST00000637667 ZNF625Q96I27 306 aaPredicted RBP11.8□□□□□ -0.52
CLN6-222ENST00000637667 RPL24P83731 157 aaKnown RBP11.79□□□□□ -0.52
CLN6-222ENST00000637667 TMEM170BQ5T4T1 132 aa11.79□□□□□ -0.52
CLN6-222ENST00000637667 SFTA2Q6UW10 78 aa11.78□□□□□ -0.52
CLN6-222ENST00000637667 APOC3P02656 99 aa11.77□□□□□ -0.53
CLN6-222ENST00000637667 FAM229BQ4G0N7 80 aa11.77□□□□□ -0.53
CLN6-222ENST00000637667 KRTAP13-2Q52LG2 175 aa11.77□□□□□ -0.53
CLN6-222ENST00000637667 TMEM238C9JI98 176 aa11.76□□□□□ -0.53
CLN6-222ENST00000637667 PRLHP81277 87 aa11.76□□□□□ -0.53
CLN6-222ENST00000637667 Q8NDZ9 215 aa11.76□□□□□ -0.53
CLN6-222ENST00000637667 TMEM126AQ9H061 195 aa11.76□□□□□ -0.53
CLN6-222ENST00000637667 FAM19A1Q7Z5A9 133 aa11.75□□□□□ -0.53
CLN6-222ENST00000637667 CHTOPQ9Y3Y2 248 aaKnown RBP11.75□□□□□ -0.53
CLN6-222ENST00000637667 SNAPINO95295 136 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms