RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 SFTA2Q6UW10 78 aa10.72□□□□□ -0.69
CACNA1A-231ENST00000636816 C2orf82Q6UX34 121 aa10.72□□□□□ -0.69
CACNA1A-231ENST00000636816 SOSTDC1Q6X4U4 206 aa10.72□□□□□ -0.69
CACNA1A-231ENST00000636816 LINC01561Q8N1V8 128 aa10.71□□□□□ -0.69
CACNA1A-231ENST00000636816 LINC00308Q8TCZ7 52 aa10.71□□□□□ -0.69
CACNA1A-231ENST00000636816 DNAH9Q9NYC9 4486 aa10.71□□□□□ -0.7
CACNA1A-231ENST00000636816 B9D2Q9BPU9 175 aa10.7□□□□□ -0.7
CACNA1A-231ENST00000636816 PRO1854Q9UHT4 67 aa10.7□□□□□ -0.7
CACNA1A-231ENST00000636816 MALP21145 153 aa10.7□□□□□ -0.7
CACNA1A-231ENST00000636816 KIAA0087Q14695 138 aa10.7□□□□□ -0.7
CACNA1A-231ENST00000636816 OCIAD2Q56VL3 154 aa10.7□□□□□ -0.7
CACNA1A-231ENST00000636816 Q8IZM0 81 aa10.7□□□□□ -0.7
CACNA1A-231ENST00000636816 CBY1Q9Y3M2 126 aa10.7□□□□□ -0.7
CACNA1A-231ENST00000636816 IFITM1P13164 125 aa10.69□□□□□ -0.7
CACNA1A-231ENST00000636816 STAB2Q8WWQ8 2551 aa10.69□□□□□ -0.7
CACNA1A-231ENST00000636816 CRPP02741 224 aa10.68□□□□□ -0.7
CACNA1A-231ENST00000636816 C15orf53Q8NAA6 179 aa10.68□□□□□ -0.7
CACNA1A-231ENST00000636816 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.68□□□□□ -0.7
CACNA1A-231ENST00000636816 A0A0B4J2C4 111 aa10.68□□□□□ -0.7
CACNA1A-231ENST00000636816 H7C2G1 150 aa10.68□□□□□ -0.7
CACNA1A-231ENST00000636816 LINC00588Q9Y4M8 146 aa10.68□□□□□ -0.7
CACNA1A-231ENST00000636816 PFN2P35080 140 aa10.67□□□□□ -0.7
CACNA1A-231ENST00000636816 MIR7-3HGQ8N6C7 128 aa10.67□□□□□ -0.7
CACNA1A-231ENST00000636816 LINC00158P58513 81 aa10.66□□□□□ -0.7
CACNA1A-231ENST00000636816 LINC00526Q96FQ7 95 aa10.66□□□□□ -0.7
CACNA1A-231ENST00000636816 LINC01556Q5JQF7 62 aa10.66□□□□□ -0.7
CACNA1A-231ENST00000636816 KRTAP26-1Q6PEX3 210 aa10.66□□□□□ -0.7
CACNA1A-231ENST00000636816 C6orf223Q8N319 242 aa10.66□□□□□ -0.7
CACNA1A-231ENST00000636816 TRAV8-4A0A0B4J246 113 aa10.65□□□□□ -0.71
CACNA1A-231ENST00000636816 LOC107984156A0A0G2JMH3 177 aa10.65□□□□□ -0.71
CACNA1A-231ENST00000636816 K7ERU9 68 aa10.65□□□□□ -0.71
CACNA1A-231ENST00000636816 CKS1BP61024 79 aa10.65□□□□□ -0.71
CACNA1A-231ENST00000636816 ARL17AQ8IVW1 177 aa10.65□□□□□ -0.71
CACNA1A-231ENST00000636816 ERG28Q9UKR5 140 aa10.65□□□□□ -0.71
CACNA1A-231ENST00000636816 IBA57-AS1B1ANH7 110 aa10.64□□□□□ -0.71
CACNA1A-231ENST00000636816 KLK5Q9Y337 293 aaPredicted RBP10.64□□□□□ -0.71
CACNA1A-231ENST00000636816 DNAH10OSP0CZ25 163 aa10.63□□□□□ -0.71
CACNA1A-231ENST00000636816 C9orf116Q5BN46 136 aaPredicted RBP10.63□□□□□ -0.71
CACNA1A-231ENST00000636816 C10orf25Q5T742 122 aa10.62□□□□□ -0.71
CACNA1A-231ENST00000636816 F8W1H4 67 aa10.61□□□□□ -0.71
CACNA1A-231ENST00000636816 CCL18P55774 89 aa10.61□□□□□ -0.71
CACNA1A-231ENST00000636816 SPAG11BQ08648 103 aa10.61□□□□□ -0.71
CACNA1A-231ENST00000636816 H3BMG7 143 aa10.61□□□□□ -0.71
CACNA1A-231ENST00000636816 UNQ6190/PRO20217Q6UXQ8 127 aa10.61□□□□□ -0.71
CACNA1A-231ENST00000636816 DNHD1Q96M86 4753 aa10.6□□□□□ -0.71
CACNA1A-231ENST00000636816 Q1RN00 199 aa10.6□□□□□ -0.71
CACNA1A-231ENST00000636816 Q9HAA7 133 aa10.59□□□□□ -0.71
CACNA1A-231ENST00000636816 RPL13AP40429 203 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-231ENST00000636816 PSMB2P49721 201 aa10.59□□□□□ -0.71
CACNA1A-231ENST00000636816 IGKV2D-24A0A075B6R9 120 aa10.58□□□□□ -0.72
CACNA1A-231ENST00000636816 CXCL5P42830 114 aa10.58□□□□□ -0.72
CACNA1A-231ENST00000636816 COPS9Q8WXC6 57 aa10.58□□□□□ -0.72
CACNA1A-231ENST00000636816 SND1-IT1Q9HBX3 110 aa10.58□□□□□ -0.72
CACNA1A-231ENST00000636816 SCGB1C2P0DMR2 95 aa10.57□□□□□ -0.72
CACNA1A-231ENST00000636816 HIGD2BQ4VC39 106 aa10.57□□□□□ -0.72
CACNA1A-231ENST00000636816 C1orf43Q9BWL3 253 aa10.57□□□□□ -0.72
CACNA1A-231ENST00000636816 TCL1BO95988 128 aa10.57□□□□□ -0.72
CACNA1A-231ENST00000636816 MTURNQ8N3F0 131 aa10.57□□□□□ -0.72
CACNA1A-231ENST00000636816 PRKDCP78527 4128 aaKnown RBP10.56□□□□□ -0.72
CACNA1A-231ENST00000636816 IGKV2-28A0A075B6P5 120 aa10.56□□□□□ -0.72
CACNA1A-231ENST00000636816 TRIAP1O43715 76 aa10.56□□□□□ -0.72
CACNA1A-231ENST00000636816 IGKV2D-28P01615 120 aa10.56□□□□□ -0.72
CACNA1A-231ENST00000636816 PPDPFQ9H3Y8 114 aa10.56□□□□□ -0.72
CACNA1A-231ENST00000636816 NHLRC4P0CG21 123 aaPredicted RBP10.56□□□□□ -0.72
CACNA1A-231ENST00000636816 RNF151Q2KHN1 245 aa10.56□□□□□ -0.72
CACNA1A-231ENST00000636816 C15orf56Q8N910 161 aa10.56□□□□□ -0.72
CACNA1A-231ENST00000636816 NTN5Q8WTR8 489 aaPredicted RBP10.56□□□□□ -0.72
CACNA1A-231ENST00000636816 APLNQ9ULZ1 77 aa10.56□□□□□ -0.72
CACNA1A-231ENST00000636816 PRO0461Q9UI25 63 aa10.55□□□□□ -0.72
CACNA1A-231ENST00000636816 MEGF8Q7Z7M0 2845 aa10.54□□□□□ -0.72
CACNA1A-231ENST00000636816 TRBV30A0A0K0K1B3 111 aa10.54□□□□□ -0.72
CACNA1A-231ENST00000636816 UPK3BQ9BT76 320 aa10.54□□□□□ -0.72
CACNA1A-231ENST00000636816 CSMD3Q7Z407 3707 aa10.54□□□□□ -0.72
CACNA1A-231ENST00000636816 LYRM7Q5U5X0 104 aa10.54□□□□□ -0.72
CACNA1A-231ENST00000636816 LINC00337Q8N6G1 96 aa10.54□□□□□ -0.72
CACNA1A-231ENST00000636816 COX17Q14061 63 aa10.53□□□□□ -0.72
CACNA1A-231ENST00000636816 WFDC2Q14508 124 aa10.53□□□□□ -0.72
CACNA1A-231ENST00000636816 LYSTQ99698 3801 aa10.53□□□□□ -0.72
CACNA1A-231ENST00000636816 VPS25Q9BRG1 176 aa10.52□□□□□ -0.72
CACNA1A-231ENST00000636816 C6orf48Q9UBA6 75 aa10.52□□□□□ -0.72
CACNA1A-231ENST00000636816 ZNF561-AS1K7EIQ3 104 aa10.52□□□□□ -0.73
CACNA1A-231ENST00000636816 CASC10Q5T4H9 136 aa10.52□□□□□ -0.73
CACNA1A-231ENST00000636816 PRR3P79522 188 aaKnown RBP10.51□□□□□ -0.73
CACNA1A-231ENST00000636816 TRBV20-1A0A075B6N2 111 aa10.5□□□□□ -0.73
CACNA1A-231ENST00000636816 Q8NDZ9 215 aa10.5□□□□□ -0.73
CACNA1A-231ENST00000636816 DYNC2H1Q8NCM8 4307 aaKnown RBP10.49□□□□□ -0.73
CACNA1A-231ENST00000636816 CAMK2N2Q96S95 79 aa10.49□□□□□ -0.73
CACNA1A-231ENST00000636816 Q6ZRU5 148 aa10.48□□□□□ -0.73
CACNA1A-231ENST00000636816 CLEC2BQ92478 149 aa10.48□□□□□ -0.73
CACNA1A-231ENST00000636816 KRTAP1-5Q9BYS1 174 aa10.48□□□□□ -0.73
CACNA1A-231ENST00000636816 GVQW2A0A096LPI5 108 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-231ENST00000636816 TRAV13-2A0A0B4J235 113 aa10.48□□□□□ -0.73
CACNA1A-231ENST00000636816 SMCPP49901 116 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-231ENST00000636816 TENM2Q9NT68 2774 aa10.48□□□□□ -0.73
CACNA1A-231ENST00000636816 DNAH1Q9P2D7 4330 aa10.47□□□□□ -0.73
CACNA1A-231ENST00000636816 UBE2DNLQ8IWF7 75 aa10.47□□□□□ -0.73
CACNA1A-231ENST00000636816 ETDBQ3ZM63 59 aa10.46□□□□□ -0.74
CACNA1A-231ENST00000636816 DNAH7Q8WXX0 4024 aa10.45□□□□□ -0.74
CACNA1A-231ENST00000636816 COX6CP09669 75 aa10.45□□□□□ -0.74
CACNA1A-231ENST00000636816 PCP4P48539 62 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms