RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 LRP2P98164 4655 aa10.95□□□□□ -0.66
PNKP-225ENST00000636214 LINC01549A6NIU2 74 aa10.94□□□□□ -0.66
PNKP-225ENST00000636214 ADCYAP1P18509 176 aa10.94□□□□□ -0.66
PNKP-225ENST00000636214 CXCL5P42830 114 aa10.94□□□□□ -0.66
PNKP-225ENST00000636214 LINC00469Q8N7U9 141 aa10.94□□□□□ -0.66
PNKP-225ENST00000636214 COX19Q49B96 90 aa10.93□□□□□ -0.66
PNKP-225ENST00000636214 C9orf129Q5T035 196 aaKnown RBP10.93□□□□□ -0.66
PNKP-225ENST00000636214 ERASQ7Z444 233 aa10.93□□□□□ -0.66
PNKP-225ENST00000636214 CDKN2A-AS1Q9UH64 79 aa10.93□□□□□ -0.66
PNKP-225ENST00000636214 F8VRH5 84 aa10.92□□□□□ -0.66
PNKP-225ENST00000636214 H0Y9J4 135 aa10.92□□□□□ -0.66
PNKP-225ENST00000636214 SEC11CQ9BY50 192 aa10.92□□□□□ -0.66
PNKP-225ENST00000636214 GNB1LQ9BYB4 327 aa10.92□□□□□ -0.66
PNKP-225ENST00000636214 FA2HQ7L5A8 372 aa10.91□□□□□ -0.66
PNKP-225ENST00000636214 SMCO4Q9NRQ5 59 aa10.91□□□□□ -0.66
PNKP-225ENST00000636214 LBHQ53QV2 105 aaPredicted RBP10.9□□□□□ -0.66
PNKP-225ENST00000636214 KRTAP11-1Q8IUC1 163 aa10.89□□□□□ -0.67
PNKP-225ENST00000636214 XAGE1AQ9HD64 81 aa10.89□□□□□ -0.67
PNKP-225ENST00000636214 TINCRA0A1B0GVN0 87 aa10.88□□□□□ -0.67
PNKP-225ENST00000636214 FABP9Q0Z7S8 132 aa10.88□□□□□ -0.67
PNKP-225ENST00000636214 KRTAP7-1Q8IUC3 87 aa10.88□□□□□ -0.67
PNKP-225ENST00000636214 PRR26Q8N8Z3 221 aa10.88□□□□□ -0.67
PNKP-225ENST00000636214 IGLV1-50A0A075B6I6 118 aa10.87□□□□□ -0.67
PNKP-225ENST00000636214 PDZD11Q5EBL8 140 aa10.87□□□□□ -0.67
PNKP-225ENST00000636214 COMMD7Q86VX2 200 aa10.87□□□□□ -0.67
PNKP-225ENST00000636214 COX7B2Q8TF08 81 aa10.87□□□□□ -0.67
PNKP-225ENST00000636214 SMIM1B2RUZ4 78 aa10.86□□□□□ -0.67
PNKP-225ENST00000636214 NUPR1O60356 82 aa10.86□□□□□ -0.67
PNKP-225ENST00000636214 MRPL18Q9H0U6 180 aaKnown RBP10.86□□□□□ -0.67
PNKP-225ENST00000636214 C22orf24Q9Y442 160 aa10.86□□□□□ -0.67
PNKP-225ENST00000636214 H3BRM9 83 aa10.85□□□□□ -0.67
PNKP-225ENST00000636214 IFITM2Q01629 132 aa10.85□□□□□ -0.67
PNKP-225ENST00000636214 RPS10P5Q9NQ39 176 aa10.85□□□□□ -0.67
PNKP-225ENST00000636214 LINC01546A6NGU7 62 aa10.84□□□□□ -0.67
PNKP-225ENST00000636214 PMVKQ15126 192 aa10.84□□□□□ -0.67
PNKP-225ENST00000636214 RHEBQ15382 184 aa10.84□□□□□ -0.67
PNKP-225ENST00000636214 CST9LQ9H4G1 147 aa10.84□□□□□ -0.67
PNKP-225ENST00000636214 RPL13AP40429 203 aaKnown RBP10.83□□□□□ -0.68
PNKP-225ENST00000636214 TP73-AS1Q9UF72 201 aa10.83□□□□□ -0.68
PNKP-225ENST00000636214 IGLV5-45A0A087WSX0 123 aa10.82□□□□□ -0.68
PNKP-225ENST00000636214 ZNF861PO60384 105 aa10.82□□□□□ -0.68
PNKP-225ENST00000636214 SPINK8P0C7L1 97 aa10.82□□□□□ -0.68
PNKP-225ENST00000636214 MRPL55Q7Z7F7 128 aaKnown RBP10.82□□□□□ -0.68
PNKP-225ENST00000636214 NDUFA6P56556 154 aa10.81□□□□□ -0.68
PNKP-225ENST00000636214 ATP5LO75964 103 aa10.8□□□□□ -0.68
PNKP-225ENST00000636214 RAB5BP61020 215 aa10.79□□□□□ -0.68
PNKP-225ENST00000636214 NKAPP1Q8N9T2 125 aa10.79□□□□□ -0.68
PNKP-225ENST00000636214 RPL28P46779 137 aaKnown RBP10.78□□□□□ -0.68
PNKP-225ENST00000636214 CARHSP1Q9Y2V2 147 aaKnown RBP10.78□□□□□ -0.68
PNKP-225ENST00000636214 TRAPPC1Q9Y5R8 145 aa10.78□□□□□ -0.68
PNKP-225ENST00000636214 KRTAP1-4P0C5Y4 121 aa10.77□□□□□ -0.69
PNKP-225ENST00000636214 HBDP02042 147 aa10.76□□□□□ -0.69
PNKP-225ENST00000636214 C10orf91Q5T1B1 145 aa10.76□□□□□ -0.69
PNKP-225ENST00000636214 RNF213Q63HN8 5207 aa10.75□□□□□ -0.69
PNKP-225ENST00000636214 GAGE10A6NGK3 116 aa10.75□□□□□ -0.69
PNKP-225ENST00000636214 BCE1O60756 84 aa10.75□□□□□ -0.69
PNKP-225ENST00000636214 IGLC3P0DOY3 106 aa10.75□□□□□ -0.69
PNKP-225ENST00000636214 LINC00167Q96N53 147 aa10.75□□□□□ -0.69
PNKP-225ENST00000636214 RPL37AP8A6NKH3 93 aa10.74□□□□□ -0.69
PNKP-225ENST00000636214 LINC00614P0C842 121 aa10.74□□□□□ -0.69
PNKP-225ENST00000636214 NDUFA5Q16718 116 aa10.74□□□□□ -0.69
PNKP-225ENST00000636214 PFN2P35080 140 aa10.73□□□□□ -0.69
PNKP-225ENST00000636214 C18orf32Q8TCD1 76 aa10.73□□□□□ -0.69
PNKP-225ENST00000636214 UBE2AP49459 152 aa10.72□□□□□ -0.69
PNKP-225ENST00000636214 APOC3P02656 99 aa10.71□□□□□ -0.69
PNKP-225ENST00000636214 ZNF22P17026 224 aaPredicted RBP10.71□□□□□ -0.69
PNKP-225ENST00000636214 IGLV5-37A0A075B6J1 123 aa10.7□□□□□ -0.7
PNKP-225ENST00000636214 SNAPINO95295 136 aa10.7□□□□□ -0.7
PNKP-225ENST00000636214 PMCHL1Q16048 86 aa10.7□□□□□ -0.7
PNKP-225ENST00000636214 A0A096LNJ9 63 aa10.69□□□□□ -0.7
PNKP-225ENST00000636214 IGLV5-39A0A0G2JS06 123 aa10.69□□□□□ -0.7
PNKP-225ENST00000636214 TMEM170BQ5T4T1 132 aa10.69□□□□□ -0.7
PNKP-225ENST00000636214 SFTA2Q6UW10 78 aa10.69□□□□□ -0.7
PNKP-225ENST00000636214 BAGE3Q86Y29 109 aa10.69□□□□□ -0.7
PNKP-225ENST00000636214 SVBPQ8N300 66 aa10.69□□□□□ -0.7
PNKP-225ENST00000636214 ERG28Q9UKR5 140 aa10.69□□□□□ -0.7
PNKP-225ENST00000636214 CRYGAP11844 174 aa10.68□□□□□ -0.7
PNKP-225ENST00000636214 PRR4Q16378 134 aa10.68□□□□□ -0.7
PNKP-225ENST00000636214 IGKV2-28A0A075B6P5 120 aa10.67□□□□□ -0.7
PNKP-225ENST00000636214 IGKV2D-28P01615 120 aa10.67□□□□□ -0.7
PNKP-225ENST00000636214 RPL24P83731 157 aaKnown RBP10.67□□□□□ -0.7
PNKP-225ENST00000636214 COX17Q14061 63 aa10.67□□□□□ -0.7
PNKP-225ENST00000636214 URB1-AS1Q96HZ7 61 aa10.66□□□□□ -0.7
PNKP-225ENST00000636214 ZNF625Q96I27 306 aaPredicted RBP10.66□□□□□ -0.7
PNKP-225ENST00000636214 C11orf86A6NJI1 115 aa10.65□□□□□ -0.7
PNKP-225ENST00000636214 TYMSOSQ8TAI1 123 aa10.65□□□□□ -0.7
PNKP-225ENST00000636214 SND1-IT1Q9HBX3 110 aa10.64□□□□□ -0.71
PNKP-225ENST00000636214 CHTOPQ9Y3Y2 248 aaKnown RBP10.64□□□□□ -0.71
PNKP-225ENST00000636214 SCO1O75880 301 aa10.62□□□□□ -0.71
PNKP-225ENST00000636214 TSPAN13O95857 204 aa10.62□□□□□ -0.71
PNKP-225ENST00000636214 FAM19A1Q7Z5A9 133 aa10.62□□□□□ -0.71
PNKP-225ENST00000636214 LPAP08519 4548 aa10.61□□□□□ -0.71
PNKP-225ENST00000636214 A0A087X002 238 aa10.61□□□□□ -0.71
PNKP-225ENST00000636214 ATP6V1G1O75348 118 aa10.61□□□□□ -0.71
PNKP-225ENST00000636214 VPREB1P12018 145 aa10.61□□□□□ -0.71
PNKP-225ENST00000636214 LINC00158P58513 81 aa10.61□□□□□ -0.71
PNKP-225ENST00000636214 CHCHD1Q96BP2 118 aaKnown RBP10.61□□□□□ -0.71
PNKP-225ENST00000636214 IFI27L1Q96BM0 104 aa10.59□□□□□ -0.71
PNKP-225ENST00000636214 PRLHP81277 87 aa10.58□□□□□ -0.72
PNKP-225ENST00000636214 KRTAP13-1Q8IUC0 172 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms