RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 PLAC8L1A1L4L8 177 aa5.26□□□□□ -1.57
PKP4-217ENST00000628904 A8MTW9 85 aa5.26□□□□□ -1.57
PKP4-217ENST00000628904 F8W1H4 67 aa5.26□□□□□ -1.57
PKP4-217ENST00000628904 ATXN8Q156A1 80 aa5.26□□□□□ -1.57
PKP4-217ENST00000628904 MIAQ16674 131 aa5.26□□□□□ -1.57
PKP4-217ENST00000628904 TENM2Q9NT68 2774 aa5.26□□□□□ -1.57
PKP4-217ENST00000628904 RPL32P62910 135 aaKnown RBP5.26□□□□□ -1.57
PKP4-217ENST00000628904 CYSRT1A8MQ03 144 aa5.25□□□□□ -1.57
PKP4-217ENST00000628904 ZNF561-AS1K7EIQ3 104 aa5.25□□□□□ -1.57
PKP4-217ENST00000628904 COX7A2LO14548 114 aa5.25□□□□□ -1.57
PKP4-217ENST00000628904 CSNK1G2-AS1Q8NCQ2 148 aa5.25□□□□□ -1.57
PKP4-217ENST00000628904 LINC01620Q4KN68 170 aa5.24□□□□□ -1.57
PKP4-217ENST00000628904 KPRPQ5T749 579 aaPredicted RBP5.24□□□□□ -1.57
PKP4-217ENST00000628904 DEFB131BA0A096LNP1 70 aa5.24□□□□□ -1.57
PKP4-217ENST00000628904 WFDC10BQ8IUB3 73 aa5.24□□□□□ -1.57
PKP4-217ENST00000628904 SPAG11BQ08648 103 aa5.24□□□□□ -1.57
PKP4-217ENST00000628904 TTC32Q5I0X7 151 aa5.24□□□□□ -1.57
PKP4-217ENST00000628904 GAGE2AQ6NT46 116 aa5.24□□□□□ -1.57
PKP4-217ENST00000628904 C11orf45Q8TAV5 145 aa5.24□□□□□ -1.57
PKP4-217ENST00000628904 SPANXB1Q9NS25 103 aaPredicted RBP5.24□□□□□ -1.57
PKP4-217ENST00000628904 UNQ6190/PRO20217Q6UXQ8 127 aa5.23□□□□□ -1.57
PKP4-217ENST00000628904 RPL18AQ02543 176 aaKnown RBP5.23□□□□□ -1.57
PKP4-217ENST00000628904 SOSTDC1Q6X4U4 206 aa5.23□□□□□ -1.57
PKP4-217ENST00000628904 FAM104AQ969W3 186 aa5.23□□□□□ -1.57
PKP4-217ENST00000628904 FOXI1Q12951 378 aa5.22□□□□□ -1.57
PKP4-217ENST00000628904 TRBV20-1A0A075B6N2 111 aa5.22□□□□□ -1.57
PKP4-217ENST00000628904 TRAV8-4A0A0B4J246 113 aa5.22□□□□□ -1.57
PKP4-217ENST00000628904 KRTAP10-11P60412 298 aa5.22□□□□□ -1.57
PKP4-217ENST00000628904 UBE2DNLQ8IWF7 75 aa5.22□□□□□ -1.57
PKP4-217ENST00000628904 CAMK2N2Q96S95 79 aa5.22□□□□□ -1.57
PKP4-217ENST00000628904 SPATA25Q9BR10 227 aa5.22□□□□□ -1.57
PKP4-217ENST00000628904 NDUFA1O15239 70 aa5.22□□□□□ -1.57
PKP4-217ENST00000628904 BAALC-AS2P0C853 105 aa5.22□□□□□ -1.57
PKP4-217ENST00000628904 TIRAPP58753 221 aa5.22□□□□□ -1.57
PKP4-217ENST00000628904 SNCGO76070 127 aa5.21□□□□□ -1.58
PKP4-217ENST00000628904 CCL18P55774 89 aa5.21□□□□□ -1.58
PKP4-217ENST00000628904 ANAPC13Q9BS18 74 aa5.21□□□□□ -1.58
PKP4-217ENST00000628904 LYRM9A8MSI8 78 aa5.21□□□□□ -1.58
PKP4-217ENST00000628904 GHRHP01286 108 aa5.21□□□□□ -1.58
PKP4-217ENST00000628904 SMCPP49901 116 aaPredicted RBP5.21□□□□□ -1.58
PKP4-217ENST00000628904 C15orf53Q8NAA6 179 aa5.21□□□□□ -1.58
PKP4-217ENST00000628904 DEFB105AQ8NG35 78 aa5.21□□□□□ -1.58
PKP4-217ENST00000628904 CITED1Q99966 193 aa5.21□□□□□ -1.58
PKP4-217ENST00000628904 C1orf43Q9BWL3 253 aa5.21□□□□□ -1.58
PKP4-217ENST00000628904 MT-ATP8P03928 68 aa5.2□□□□□ -1.58
PKP4-217ENST00000628904 TEN1Q86WV5 123 aa5.2□□□□□ -1.58
PKP4-217ENST00000628904 PPDPFLQ8WWR9 84 aa5.2□□□□□ -1.58
PKP4-217ENST00000628904 OVOL2Q9BRP0 275 aa5.2□□□□□ -1.58
PKP4-217ENST00000628904 PSCAO43653 123 aa5.2□□□□□ -1.58
PKP4-217ENST00000628904 MIFP14174 115 aa5.2□□□□□ -1.58
PKP4-217ENST00000628904 SBSPONQ8IVN8 264 aa5.2□□□□□ -1.58
PKP4-217ENST00000628904 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.2□□□□□ -1.58
PKP4-217ENST00000628904 C10orf25Q5T742 122 aa5.2□□□□□ -1.58
PKP4-217ENST00000628904 LAMTOR3Q9UHA4 124 aa5.2□□□□□ -1.58
PKP4-217ENST00000628904 IGKV2-24A0A0C4DH68 120 aa5.19□□□□□ -1.58
PKP4-217ENST00000628904 COPS9Q8WXC6 57 aa5.19□□□□□ -1.58
PKP4-217ENST00000628904 IGHV3OR16-9A0A0B4J2B5 98 aa5.19□□□□□ -1.58
PKP4-217ENST00000628904 M0R2N4 97 aa5.19□□□□□ -1.58
PKP4-217ENST00000628904 SHISA2Q6UWI4 295 aa5.19□□□□□ -1.58
PKP4-217ENST00000628904 LINC00337Q8N6G1 96 aa5.19□□□□□ -1.58
PKP4-217ENST00000628904 KIR2DL5BQ8NHK3 375 aa5.19□□□□□ -1.58
PKP4-217ENST00000628904 SMIM9A6NGZ8 99 aa5.18□□□□□ -1.58
PKP4-217ENST00000628904 GAGE2BQ13066 116 aa5.18□□□□□ -1.58
PKP4-217ENST00000628904 Q8NAQ8 132 aa5.18□□□□□ -1.58
PKP4-217ENST00000628904 RNF183Q96D59 192 aa5.18□□□□□ -1.58
PKP4-217ENST00000628904 C14orf132Q9NPU4 83 aa5.18□□□□□ -1.58
PKP4-217ENST00000628904 A0A0B4J2C4 111 aa5.18□□□□□ -1.58
PKP4-217ENST00000628904 HERV-K104P63124 156 aa5.18□□□□□ -1.58
PKP4-217ENST00000628904 SMIM11BQ8TCY0 68 aa5.18□□□□□ -1.58
PKP4-217ENST00000628904 IGKV2-28A0A075B6P5 120 aa5.18□□□□□ -1.58
PKP4-217ENST00000628904 IGKV2D-28P01615 120 aa5.18□□□□□ -1.58
PKP4-217ENST00000628904 LITAFQ99732 161 aa5.18□□□□□ -1.58
PKP4-217ENST00000628904 IFITM1P13164 125 aa5.17□□□□□ -1.58
PKP4-217ENST00000628904 ANK3Q12955 4377 aaKnown RBP5.17□□□□□ -1.58
PKP4-217ENST00000628904 TRAV13-2A0A0B4J235 113 aa5.17□□□□□ -1.58
PKP4-217ENST00000628904 H7C423 109 aa5.17□□□□□ -1.58
PKP4-217ENST00000628904 C6orf99Q4VX62 202 aa5.17□□□□□ -1.58
PKP4-217ENST00000628904 LYPD5Q6UWN5 251 aa5.17□□□□□ -1.58
PKP4-217ENST00000628904 SPANXCQ9NY87 97 aa5.17□□□□□ -1.58
PKP4-217ENST00000628904 SS18L2Q9UHA2 77 aa5.17□□□□□ -1.58
PKP4-217ENST00000628904 CSMD3Q7Z407 3707 aa5.16□□□□□ -1.58
PKP4-217ENST00000628904 A0A087WYN8 130 aa5.16□□□□□ -1.58
PKP4-217ENST00000628904 A0A087WZ39 114 aa5.16□□□□□ -1.58
PKP4-217ENST00000628904 HIST1H4AP62805 103 aaKnown RBP5.16□□□□□ -1.58
PKP4-217ENST00000628904 ESRGQ1W209 222 aa5.16□□□□□ -1.58
PKP4-217ENST00000628904 CD164L2Q6UWJ8 174 aa5.16□□□□□ -1.58
PKP4-217ENST00000628904 B5MCH6 92 aa5.16□□□□□ -1.58
PKP4-217ENST00000628904 FAM218AQ96MZ4 157 aa5.16□□□□□ -1.58
PKP4-217ENST00000628904 IGKV3D-7A0A0C4DH55 119 aa5.15□□□□□ -1.58
PKP4-217ENST00000628904 TRBV10-2A0A0K0K1G8 114 aa5.15□□□□□ -1.58
PKP4-217ENST00000628904 RPL37AP8A6NKH3 93 aa5.15□□□□□ -1.59
PKP4-217ENST00000628904 XGP55808 180 aa5.15□□□□□ -1.59
PKP4-217ENST00000628904 IL17DQ8TAD2 202 aa5.15□□□□□ -1.59
PKP4-217ENST00000628904 SPANXDQ9BXN6 97 aa5.15□□□□□ -1.59
PKP4-217ENST00000628904 IGLV5-39A0A0G2JS06 123 aa5.14□□□□□ -1.59
PKP4-217ENST00000628904 LELP1Q5T871 98 aa5.14□□□□□ -1.59
PKP4-217ENST00000628904 CSDC2Q9Y534 153 aaKnown RBP5.14□□□□□ -1.59
PKP4-217ENST00000628904 TRBV30A0A0K0K1B3 111 aa5.14□□□□□ -1.59
PKP4-217ENST00000628904 FUSP35637 526 aaKnown RBP eCLIP5.14□□□□□ -1.59
PKP4-217ENST00000628904 PRO0461Q9UI25 63 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms