RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 CDKN2A-AS1Q9UH64 79 aa11.61□□□□□ -0.55
ATG4B-226ENST00000625810 CLLU1Q5K131 121 aa11.6□□□□□ -0.55
ATG4B-226ENST00000625810 TOMM6Q96B49 74 aa11.6□□□□□ -0.55
ATG4B-226ENST00000625810 SCGB3A1Q96QR1 104 aa11.59□□□□□ -0.55
ATG4B-226ENST00000625810 IGLV1-50A0A075B6I6 118 aa11.58□□□□□ -0.56
ATG4B-226ENST00000625810 XAGE1AQ9HD64 81 aa11.58□□□□□ -0.56
ATG4B-226ENST00000625810 LPAP08519 4548 aa11.58□□□□□ -0.56
ATG4B-226ENST00000625810 F8VRH5 84 aa11.57□□□□□ -0.56
ATG4B-226ENST00000625810 ERASQ7Z444 233 aa11.57□□□□□ -0.56
ATG4B-226ENST00000625810 C22orf24Q9Y442 160 aa11.57□□□□□ -0.56
ATG4B-226ENST00000625810 TRAV9-1A0A075B6T8 112 aa11.56□□□□□ -0.56
ATG4B-226ENST00000625810 LBHQ53QV2 105 aaPredicted RBP11.56□□□□□ -0.56
ATG4B-226ENST00000625810 UQCC3Q6UW78 93 aa11.56□□□□□ -0.56
ATG4B-226ENST00000625810 TMEM218A2RU14 115 aa11.55□□□□□ -0.56
ATG4B-226ENST00000625810 ADCYAP1P18509 176 aa11.55□□□□□ -0.56
ATG4B-226ENST00000625810 S100PP25815 95 aa11.55□□□□□ -0.56
ATG4B-226ENST00000625810 CXCL5P42830 114 aa11.55□□□□□ -0.56
ATG4B-226ENST00000625810 KRTAP1-4P0C5Y4 121 aa11.54□□□□□ -0.56
ATG4B-226ENST00000625810 LINC01549A6NIU2 74 aa11.53□□□□□ -0.56
ATG4B-226ENST00000625810 NUPR1O60356 82 aa11.53□□□□□ -0.56
ATG4B-226ENST00000625810 ZNF861PO60384 105 aa11.53□□□□□ -0.56
ATG4B-226ENST00000625810 TINCRA0A1B0GVN0 87 aa11.52□□□□□ -0.57
ATG4B-226ENST00000625810 PDZD11Q5EBL8 140 aa11.52□□□□□ -0.57
ATG4B-226ENST00000625810 COX7B2Q8TF08 81 aa11.52□□□□□ -0.57
ATG4B-226ENST00000625810 GNB1LQ9BYB4 327 aa11.52□□□□□ -0.57
ATG4B-226ENST00000625810 SMIM1B2RUZ4 78 aa11.51□□□□□ -0.57
ATG4B-226ENST00000625810 RPL13AP40429 203 aaKnown RBP11.51□□□□□ -0.57
ATG4B-226ENST00000625810 MRPL55Q7Z7F7 128 aaKnown RBP11.5□□□□□ -0.57
ATG4B-226ENST00000625810 COX19Q49B96 90 aa11.49□□□□□ -0.57
ATG4B-226ENST00000625810 FA2HQ7L5A8 372 aa11.49□□□□□ -0.57
ATG4B-226ENST00000625810 SEC11CQ9BY50 192 aa11.49□□□□□ -0.57
ATG4B-226ENST00000625810 CST9LQ9H4G1 147 aa11.49□□□□□ -0.57
ATG4B-226ENST00000625810 SMCO4Q9NRQ5 59 aa11.49□□□□□ -0.57
ATG4B-226ENST00000625810 TP73-AS1Q9UF72 201 aa11.49□□□□□ -0.57
ATG4B-226ENST00000625810 LINC01546A6NGU7 62 aa11.48□□□□□ -0.57
ATG4B-226ENST00000625810 CARHSP1Q9Y2V2 147 aaKnown RBP11.48□□□□□ -0.57
ATG4B-226ENST00000625810 IGLV5-45A0A087WSX0 123 aa11.47□□□□□ -0.57
ATG4B-226ENST00000625810 SPINK8P0C7L1 97 aa11.47□□□□□ -0.57
ATG4B-226ENST00000625810 RAB5BP61020 215 aa11.47□□□□□ -0.57
ATG4B-226ENST00000625810 FABP9Q0Z7S8 132 aa11.47□□□□□ -0.57
ATG4B-226ENST00000625810 PMVKQ15126 192 aa11.47□□□□□ -0.57
ATG4B-226ENST00000625810 MRPL18Q9H0U6 180 aaKnown RBP11.46□□□□□ -0.57
ATG4B-226ENST00000625810 RPL28P46779 137 aaKnown RBP11.45□□□□□ -0.58
ATG4B-226ENST00000625810 IFITM2Q01629 132 aa11.45□□□□□ -0.58
ATG4B-226ENST00000625810 LINC00167Q96N53 147 aa11.45□□□□□ -0.58
ATG4B-226ENST00000625810 RPL37AP8A6NKH3 93 aa11.44□□□□□ -0.58
ATG4B-226ENST00000625810 H3BRM9 83 aa11.44□□□□□ -0.58
ATG4B-226ENST00000625810 BCE1O60756 84 aa11.44□□□□□ -0.58
ATG4B-226ENST00000625810 GAGE10A6NGK3 116 aa11.43□□□□□ -0.58
ATG4B-226ENST00000625810 NDUFA6P56556 154 aa11.42□□□□□ -0.58
ATG4B-226ENST00000625810 PRR4Q16378 134 aa11.42□□□□□ -0.58
ATG4B-226ENST00000625810 COMMD7Q86VX2 200 aa11.42□□□□□ -0.58
ATG4B-226ENST00000625810 NKAPP1Q8N9T2 125 aa11.42□□□□□ -0.58
ATG4B-226ENST00000625810 RPS10P5Q9NQ39 176 aa11.42□□□□□ -0.58
ATG4B-226ENST00000625810 ATP5LO75964 103 aa11.41□□□□□ -0.58
ATG4B-226ENST00000625810 RHEBQ15382 184 aa11.39□□□□□ -0.59
ATG4B-226ENST00000625810 IGLV5-37A0A075B6J1 123 aa11.38□□□□□ -0.59
ATG4B-226ENST00000625810 TSPAN13O95857 204 aa11.37□□□□□ -0.59
ATG4B-226ENST00000625810 IGLC3P0DOY3 106 aa11.37□□□□□ -0.59
ATG4B-226ENST00000625810 PFN2P35080 140 aa11.37□□□□□ -0.59
ATG4B-226ENST00000625810 UBE2AP49459 152 aa11.37□□□□□ -0.59
ATG4B-226ENST00000625810 LINC00614P0C842 121 aa11.36□□□□□ -0.59
ATG4B-226ENST00000625810 CRYGAP11844 174 aa11.36□□□□□ -0.59
ATG4B-226ENST00000625810 C10orf91Q5T1B1 145 aa11.36□□□□□ -0.59
ATG4B-226ENST00000625810 TRAPPC1Q9Y5R8 145 aa11.36□□□□□ -0.59
ATG4B-226ENST00000625810 A0A087X002 238 aa11.35□□□□□ -0.59
ATG4B-226ENST00000625810 TYMSOSQ8TAI1 123 aa11.35□□□□□ -0.59
ATG4B-226ENST00000625810 IGLV5-39A0A0G2JS06 123 aa11.34□□□□□ -0.59
ATG4B-226ENST00000625810 HBDP02042 147 aa11.34□□□□□ -0.59
ATG4B-226ENST00000625810 ZNF22P17026 224 aaPredicted RBP11.34□□□□□ -0.59
ATG4B-226ENST00000625810 IGKV2-28A0A075B6P5 120 aa11.33□□□□□ -0.6
ATG4B-226ENST00000625810 A0A096LNJ9 63 aa11.33□□□□□ -0.6
ATG4B-226ENST00000625810 SCO1O75880 301 aa11.33□□□□□ -0.6
ATG4B-226ENST00000625810 IGKV2D-28P01615 120 aa11.33□□□□□ -0.6
ATG4B-226ENST00000625810 C18orf32Q8TCD1 76 aa11.33□□□□□ -0.6
ATG4B-226ENST00000625810 PMCHL1Q16048 86 aa11.32□□□□□ -0.6
ATG4B-226ENST00000625810 URB1-AS1Q96HZ7 61 aa11.32□□□□□ -0.6
ATG4B-226ENST00000625810 ANAPC11Q9NYG5 84 aa11.32□□□□□ -0.6
ATG4B-226ENST00000625810 ERG28Q9UKR5 140 aa11.32□□□□□ -0.6
ATG4B-226ENST00000625810 BAGE3Q86Y29 109 aa11.31□□□□□ -0.6
ATG4B-226ENST00000625810 ZNF625Q96I27 306 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-226ENST00000625810 SND1-IT1Q9HBX3 110 aa11.31□□□□□ -0.6
ATG4B-226ENST00000625810 RPL24P83731 157 aaKnown RBP11.3□□□□□ -0.6
ATG4B-226ENST00000625810 TMEM170BQ5T4T1 132 aa11.3□□□□□ -0.6
ATG4B-226ENST00000625810 MUC2Q02817 5179 aa11.29□□□□□ -0.6
ATG4B-226ENST00000625810 COX17Q14061 63 aa11.29□□□□□ -0.6
ATG4B-226ENST00000625810 KRTAP13-1Q8IUC0 172 aa11.29□□□□□ -0.6
ATG4B-226ENST00000625810 C11orf86A6NJI1 115 aa11.28□□□□□ -0.6
ATG4B-226ENST00000625810 VPREB1P12018 145 aa11.28□□□□□ -0.6
ATG4B-226ENST00000625810 FAM19A1Q7Z5A9 133 aa11.27□□□□□ -0.61
ATG4B-226ENST00000625810 APOC3P02656 99 aa11.26□□□□□ -0.61
ATG4B-226ENST00000625810 PRLHP81277 87 aa11.26□□□□□ -0.61
ATG4B-226ENST00000625810 SFTA2Q6UW10 78 aa11.26□□□□□ -0.61
ATG4B-226ENST00000625810 FAM229BQ4G0N7 80 aa11.25□□□□□ -0.61
ATG4B-226ENST00000625810 TMEM126AQ9H061 195 aa11.25□□□□□ -0.61
ATG4B-226ENST00000625810 TMEM238C9JI98 176 aa11.24□□□□□ -0.61
ATG4B-226ENST00000625810 KRTAP13-2Q52LG2 175 aa11.24□□□□□ -0.61
ATG4B-226ENST00000625810 CHTOPQ9Y3Y2 248 aaKnown RBP11.24□□□□□ -0.61
ATG4B-226ENST00000625810 IGKV2D-26A0A0A0MRZ7 120 aa11.23□□□□□ -0.61
ATG4B-226ENST00000625810 SNAPINO95295 136 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 342.2 ms