RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 SMR3AQ99954 134 aa6.54□□□□□ -1.36
USB1-216ENST00000624720 CNFNQ9BYD5 112 aa6.54□□□□□ -1.36
USB1-216ENST00000624720 ZNF706Q9Y5V0 76 aaPredicted RBP6.54□□□□□ -1.36
USB1-216ENST00000624720 TRAV10A0A0B4J240 114 aa6.53□□□□□ -1.36
USB1-216ENST00000624720 K7EIM0 57 aa6.53□□□□□ -1.36
USB1-216ENST00000624720 PIK3CD-AS1Q5SR53 167 aa6.53□□□□□ -1.36
USB1-216ENST00000624720 NIPBLQ6KC79 2804 aaeCLIP6.53□□□□□ -1.36
USB1-216ENST00000624720 DEFB113Q30KQ7 82 aa6.53□□□□□ -1.36
USB1-216ENST00000624720 CHKB-CPT1BH3BT56 60 aa6.52□□□□□ -1.37
USB1-216ENST00000624720 IGKV1-17P01599 117 aa6.52□□□□□ -1.37
USB1-216ENST00000624720 I3L2K1 104 aa6.52□□□□□ -1.37
USB1-216ENST00000624720 MIAQ16674 131 aa6.52□□□□□ -1.37
USB1-216ENST00000624720 MINOS1Q5TGZ0 78 aa6.52□□□□□ -1.37
USB1-216ENST00000624720 Q5VV11 94 aa6.52□□□□□ -1.37
USB1-216ENST00000624720 C11orf72Q8NBR9 251 aa6.52□□□□□ -1.37
USB1-216ENST00000624720 OBSCN-AS1Q96MR7 158 aa6.52□□□□□ -1.37
USB1-216ENST00000624720 C8orf49Q96NF6 230 aa6.52□□□□□ -1.37
USB1-216ENST00000624720 LITAFQ99732 161 aa6.52□□□□□ -1.37
USB1-216ENST00000624720 MINOS1-NBL1R4GNA1 71 aa6.52□□□□□ -1.37
USB1-216ENST00000624720 PRYO14603 147 aa6.51□□□□□ -1.37
USB1-216ENST00000624720 Q9HAA7 133 aa6.51□□□□□ -1.37
USB1-216ENST00000624720 BAHCC1Q9P281 2608 aa6.51□□□□□ -1.37
USB1-216ENST00000624720 UBL5Q9BZL1 73 aa6.51□□□□□ -1.37
USB1-216ENST00000624720 ERC2-IT1O76042 136 aa6.5□□□□□ -1.37
USB1-216ENST00000624720 TRGV3P03979 118 aa6.5□□□□□ -1.37
USB1-216ENST00000624720 C9orf129Q5T035 196 aaKnown RBP6.5□□□□□ -1.37
USB1-216ENST00000624720 C5orf56Q8N8D9 126 aa6.5□□□□□ -1.37
USB1-216ENST00000624720 NPBQ8NG41 125 aa6.5□□□□□ -1.37
USB1-216ENST00000624720 OTOGQ6ZRI0 2925 aa6.5□□□□□ -1.37
USB1-216ENST00000624720 TMEM14CQ9P0S9 112 aa6.5□□□□□ -1.37
USB1-216ENST00000624720 GNRH2O43555 120 aa6.49□□□□□ -1.37
USB1-216ENST00000624720 IGHV4-31P0DP07 118 aa6.49□□□□□ -1.37
USB1-216ENST00000624720 DEFB1P60022 68 aa6.49□□□□□ -1.37
USB1-216ENST00000624720 C6orf99Q4VX62 202 aa6.49□□□□□ -1.37
USB1-216ENST00000624720 IGHV3-64A0A075B6Q5 118 aa6.49□□□□□ -1.37
USB1-216ENST00000624720 SETXQ7Z333 2677 aaKnown RBP6.49□□□□□ -1.37
USB1-216ENST00000624720 PDZD2O15018 2839 aa6.49□□□□□ -1.37
USB1-216ENST00000624720 FAM218AQ96MZ4 157 aa6.48□□□□□ -1.37
USB1-216ENST00000624720 IGLV11-55A0A075B6I3 123 aa6.48□□□□□ -1.37
USB1-216ENST00000624720 TRAV21A0A0B4J279 112 aa6.48□□□□□ -1.37
USB1-216ENST00000624720 K7EQG2 157 aa6.48□□□□□ -1.37
USB1-216ENST00000624720 PRM2P04554 102 aa6.48□□□□□ -1.37
USB1-216ENST00000624720 SUMO2P61956 95 aaKnown RBP6.48□□□□□ -1.37
USB1-216ENST00000624720 C1orf64Q8NEQ6 169 aa6.48□□□□□ -1.37
USB1-216ENST00000624720 F8W735 103 aaPredicted RBP6.47□□□□□ -1.37
USB1-216ENST00000624720 TSHBP01222 138 aa6.47□□□□□ -1.37
USB1-216ENST00000624720 CTSGP08311 255 aa6.47□□□□□ -1.37
USB1-216ENST00000624720 RNF5Q99942 180 aa6.47□□□□□ -1.37
USB1-216ENST00000624720 KIF25-AS1Q9Y6Z4 181 aa6.47□□□□□ -1.37
USB1-216ENST00000624720 DEFB136Q30KP8 78 aa6.47□□□□□ -1.37
USB1-216ENST00000624720 NREPQ16612 68 aa6.46□□□□□ -1.38
USB1-216ENST00000624720 IGHV1OR15-1A0A075B7D0 117 aa6.46□□□□□ -1.38
USB1-216ENST00000624720 A0A096LNT2 108 aa6.46□□□□□ -1.38
USB1-216ENST00000624720 Q8TAT8 98 aa6.46□□□□□ -1.38
USB1-216ENST00000624720 NCR3O14931 201 aa6.45□□□□□ -1.38
USB1-216ENST00000624720 ZNF625Q96I27 306 aaPredicted RBP6.45□□□□□ -1.38
USB1-216ENST00000624720 RNASE13Q5GAN3 156 aaKnown RBP6.45□□□□□ -1.38
USB1-216ENST00000624720 C18orf65Q6ZTR6 163 aa6.45□□□□□ -1.38
USB1-216ENST00000624720 KRTAP1-3Q8IUG1 177 aa6.45□□□□□ -1.38
USB1-216ENST00000624720 IGKV2-40A0A087WW87 121 aaPredicted RBP6.44□□□□□ -1.38
USB1-216ENST00000624720 IGKV2D-40P01614 121 aaPredicted RBP6.44□□□□□ -1.38
USB1-216ENST00000624720 KIAA0087Q14695 138 aa6.44□□□□□ -1.38
USB1-216ENST00000624720 PSCAO43653 123 aa6.44□□□□□ -1.38
USB1-216ENST00000624720 DSCR9P59020 149 aa6.44□□□□□ -1.38
USB1-216ENST00000624720 LOC100131303A0A0U1RQF7 123 aa6.43□□□□□ -1.38
USB1-216ENST00000624720 A6NDX4 124 aa6.43□□□□□ -1.38
USB1-216ENST00000624720 C19orf54Q5BKX5 351 aa6.43□□□□□ -1.38
USB1-216ENST00000624720 Q8N3U1 123 aa6.43□□□□□ -1.38
USB1-216ENST00000624720 SMAD5-AS1Q9Y6J3 95 aa6.43□□□□□ -1.38
USB1-216ENST00000624720 F8P00451 2351 aa6.43□□□□□ -1.38
USB1-216ENST00000624720 HIVEP1P15822 2718 aa6.43□□□□□ -1.38
USB1-216ENST00000624720 IGHV3-30-3P0DP02 117 aa6.43□□□□□ -1.38
USB1-216ENST00000624720 SPANXN1Q5VSR9 72 aa6.43□□□□□ -1.38
USB1-216ENST00000624720 LYPD1Q8N2G4 141 aa6.43□□□□□ -1.38
USB1-216ENST00000624720 X6R8D5 127 aa6.43□□□□□ -1.38
USB1-216ENST00000624720 CR1P17927 2039 aa6.43□□□□□ -1.38
USB1-216ENST00000624720 A6NED7 52 aa6.42□□□□□ -1.38
USB1-216ENST00000624720 CYP4F30PQ9H0H9 118 aa6.42□□□□□ -1.38
USB1-216ENST00000624720 ATRQ13535 2644 aa6.42□□□□□ -1.38
USB1-216ENST00000624720 C2CD3Q4AC94 2353 aa6.42□□□□□ -1.38
USB1-216ENST00000624720 TRBV6-8A0A0A6YYG3 113 aa6.42□□□□□ -1.38
USB1-216ENST00000624720 IGKV3-20P01619 116 aa6.42□□□□□ -1.38
USB1-216ENST00000624720 C9orf116Q5BN46 136 aaPredicted RBP6.42□□□□□ -1.38
USB1-216ENST00000624720 PRAC1Q96KF2 57 aa6.42□□□□□ -1.38
USB1-216ENST00000624720 PRAC2D3DTV9 90 aa6.41□□□□□ -1.38
USB1-216ENST00000624720 MIR7-3HGQ8N6C7 128 aa6.41□□□□□ -1.38
USB1-216ENST00000624720 ZNF580Q9UK33 172 aa6.41□□□□□ -1.38
USB1-216ENST00000624720 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
USB1-216ENST00000624720 A0A0J9YXV3 536 aa6.4□□□□□ -1.38
USB1-216ENST00000624720 H3BRN7 92 aa6.4□□□□□ -1.38
USB1-216ENST00000624720 REG3AQ06141 175 aa6.4□□□□□ -1.38
USB1-216ENST00000624720 LIMD2Q9BT23 127 aa6.4□□□□□ -1.38
USB1-216ENST00000624720 LINC01547P58512 204 aaPredicted RBP6.39□□□□□ -1.39
USB1-216ENST00000624720 AKAP9Q99996 3911 aa6.39□□□□□ -1.39
USB1-216ENST00000624720 IGHV6-1A0A0B4J1U7 121 aa6.39□□□□□ -1.39
USB1-216ENST00000624720 PRR3P79522 188 aaKnown RBP6.39□□□□□ -1.39
USB1-216ENST00000624720 HAMPP81172 84 aa6.39□□□□□ -1.39
USB1-216ENST00000624720 MOBPQ13875 183 aa6.39□□□□□ -1.39
USB1-216ENST00000624720 CLPSL1A2RUU4 121 aa6.38□□□□□ -1.39
USB1-216ENST00000624720 RPL39LQ96EH5 51 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms