RNA–Protein interactions for RNA: ENST00000622829.4

GTF2IP1-210, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP1, Length 3,605 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-210ENST00000622829 SS18Q15532 418 aa13.07□□□□□ -0.32
GTF2IP1-210ENST00000622829 CCL24O00175 119 aa13.07□□□□□ -0.32
GTF2IP1-210ENST00000622829 RPL18AQ02543 176 aaKnown RBP13.07□□□□□ -0.32
GTF2IP1-210ENST00000622829 FAM104AQ969W3 186 aa13.07□□□□□ -0.32
GTF2IP1-210ENST00000622829 CSDC2Q9Y534 153 aaKnown RBP13.07□□□□□ -0.32
GTF2IP1-210ENST00000622829 ODF3L2Q3SX64 289 aa13.07□□□□□ -0.32
GTF2IP1-210ENST00000622829 TRBV7-7A0A0K0K1E9 115 aa13.06□□□□□ -0.32
GTF2IP1-210ENST00000622829 C1orf158Q8N1D5 194 aa13.06□□□□□ -0.32
GTF2IP1-210ENST00000622829 LRRC75A-AS1Q8N1F1 130 aa13.06□□□□□ -0.32
GTF2IP1-210ENST00000622829 C6orf99Q4VX62 202 aa13.06□□□□□ -0.32
GTF2IP1-210ENST00000622829 TRAV25A0A0B4J276 109 aa13.05□□□□□ -0.32
GTF2IP1-210ENST00000622829 XAGE1AQ9HD64 81 aa13.05□□□□□ -0.32
GTF2IP1-210ENST00000622829 CYSTM1Q9H1C7 97 aa13.04□□□□□ -0.32
GTF2IP1-210ENST00000622829 ZNF702PQ9H963 129 aa13.04□□□□□ -0.32
GTF2IP1-210ENST00000622829 IGHV4-28A0A0C4DH34 117 aa13.03□□□□□ -0.32
GTF2IP1-210ENST00000622829 PF4P02776 101 aa13.03□□□□□ -0.32
GTF2IP1-210ENST00000622829 C4orf26Q17RF5 130 aa13.03□□□□□ -0.32
GTF2IP1-210ENST00000622829 IGSF10Q6WRI0 2623 aa13.03□□□□□ -0.32
GTF2IP1-210ENST00000622829 SMIM9A6NGZ8 99 aa13.03□□□□□ -0.32
GTF2IP1-210ENST00000622829 H0YGX0 51 aa13.03□□□□□ -0.32
GTF2IP1-210ENST00000622829 TIMM17BO60830 172 aa13.03□□□□□ -0.32
GTF2IP1-210ENST00000622829 RBM3P98179 157 aaKnown RBP13.03□□□□□ -0.32
GTF2IP1-210ENST00000622829 UPK3BQ9BT76 320 aa13.02□□□□□ -0.33
GTF2IP1-210ENST00000622829 DEFB105AQ8NG35 78 aa13.02□□□□□ -0.33
GTF2IP1-210ENST00000622829 C1orf43Q9BWL3 253 aa13.02□□□□□ -0.33
GTF2IP1-210ENST00000622829 C11orf72Q8NBR9 251 aa13.01□□□□□ -0.33
GTF2IP1-210ENST00000622829 SERP2Q8N6R1 65 aa13□□□□□ -0.33
GTF2IP1-210ENST00000622829 IGKV2-28A0A075B6P5 120 aa13□□□□□ -0.33
GTF2IP1-210ENST00000622829 IGKV2D-28P01615 120 aa13□□□□□ -0.33
GTF2IP1-210ENST00000622829 Q8N3U1 123 aa13□□□□□ -0.33
GTF2IP1-210ENST00000622829 IMUPQ9GZP8 106 aa13□□□□□ -0.33
GTF2IP1-210ENST00000622829 F5H768 121 aa12.99□□□□□ -0.33
GTF2IP1-210ENST00000622829 OVOL2Q9BRP0 275 aa12.99□□□□□ -0.33
GTF2IP1-210ENST00000622829 KRTAP10-9P60411 292 aa12.99□□□□□ -0.33
GTF2IP1-210ENST00000622829 PKIGQ9Y2B9 76 aa12.99□□□□□ -0.33
GTF2IP1-210ENST00000622829 TEP1Q99973 2627 aaKnown RBP12.99□□□□□ -0.33
GTF2IP1-210ENST00000622829 FLNBO75369 2602 aaKnown RBP12.99□□□□□ -0.33
GTF2IP1-210ENST00000622829 SETXQ7Z333 2677 aaKnown RBP12.98□□□□□ -0.33
GTF2IP1-210ENST00000622829 IGLV5-39A0A0G2JS06 123 aa12.97□□□□□ -0.33
GTF2IP1-210ENST00000622829 A0A0U1RQV1 116 aa12.97□□□□□ -0.33
GTF2IP1-210ENST00000622829 MRAPQ8TCY5 172 aa12.96□□□□□ -0.33
GTF2IP1-210ENST00000622829 TRBV6-8A0A0A6YYG3 113 aa12.96□□□□□ -0.34
GTF2IP1-210ENST00000622829 RPL28P46779 137 aaKnown RBP12.96□□□□□ -0.34
GTF2IP1-210ENST00000622829 LINC00482Q8N8I6 264 aa12.95□□□□□ -0.34
GTF2IP1-210ENST00000622829 MPLKIPQ8TAP9 179 aa12.95□□□□□ -0.34
GTF2IP1-210ENST00000622829 C5orf47Q569G3 176 aa12.94□□□□□ -0.34
GTF2IP1-210ENST00000622829 TRBV10-1A0A0K0K1A3 114 aa12.94□□□□□ -0.34
GTF2IP1-210ENST00000622829 BBC3Q96PG8 261 aaPredicted RBP12.94□□□□□ -0.34
GTF2IP1-210ENST00000622829 LINC00959A0A1B0GUT2 108 aa12.92□□□□□ -0.34
GTF2IP1-210ENST00000622829 DEFB135Q30KP9 77 aa12.92□□□□□ -0.34
GTF2IP1-210ENST00000622829 KLK12Q9UKR0 248 aa12.92□□□□□ -0.34
GTF2IP1-210ENST00000622829 CR1P17927 2039 aa12.92□□□□□ -0.34
GTF2IP1-210ENST00000622829 Q6ZQY7 126 aa12.92□□□□□ -0.34
GTF2IP1-210ENST00000622829 C6orf223Q8N319 242 aa12.92□□□□□ -0.34
GTF2IP1-210ENST00000622829 NBEAL1Q6ZS30 2694 aa12.91□□□□□ -0.34
GTF2IP1-210ENST00000622829 HIGD2BQ4VC39 106 aa12.9□□□□□ -0.34
GTF2IP1-210ENST00000622829 LRCOL1A6NCL2 159 aa12.9□□□□□ -0.34
GTF2IP1-210ENST00000622829 Q6YL49 198 aa12.9□□□□□ -0.34
GTF2IP1-210ENST00000622829 LINC01561Q8N1V8 128 aa12.9□□□□□ -0.34
GTF2IP1-210ENST00000622829 Q8N9L7 120 aa12.9□□□□□ -0.34
GTF2IP1-210ENST00000622829 IBA57-AS1B1ANH7 110 aa12.89□□□□□ -0.35
GTF2IP1-210ENST00000622829 BAHCC1Q9P281 2608 aa12.89□□□□□ -0.35
GTF2IP1-210ENST00000622829 HIVEP1P15822 2718 aa12.89□□□□□ -0.35
GTF2IP1-210ENST00000622829 UNQ6190/PRO20217Q6UXQ8 127 aa12.87□□□□□ -0.35
GTF2IP1-210ENST00000622829 C4orf3Q8WVX3 66 aa12.87□□□□□ -0.35
GTF2IP1-210ENST00000622829 FHL2Q14192 279 aa12.87□□□□□ -0.35
GTF2IP1-210ENST00000622829 CHCHD10Q8WYQ3 142 aaPredicted RBP12.87□□□□□ -0.35
GTF2IP1-210ENST00000622829 RMI2Q96E14 147 aa12.87□□□□□ -0.35
GTF2IP1-210ENST00000622829 C16orf74Q96GX8 76 aa12.87□□□□□ -0.35
GTF2IP1-210ENST00000622829 TMEM256-PLSCR3K7ERE1 68 aa12.87□□□□□ -0.35
GTF2IP1-210ENST00000622829 ZNF843Q8N446 348 aa12.87□□□□□ -0.35
GTF2IP1-210ENST00000622829 DPH3Q96FX2 82 aa12.86□□□□□ -0.35
GTF2IP1-210ENST00000622829 TRBV6-4A0A1B0GX49 114 aa12.86□□□□□ -0.35
GTF2IP1-210ENST00000622829 SPAG11BQ08648 103 aa12.86□□□□□ -0.35
GTF2IP1-210ENST00000622829 BRK1Q8WUW1 75 aa12.86□□□□□ -0.35
GTF2IP1-210ENST00000622829 IGLV5-45A0A087WSX0 123 aa12.85□□□□□ -0.35
GTF2IP1-210ENST00000622829 IGHV4-31P0DP07 118 aa12.85□□□□□ -0.35
GTF2IP1-210ENST00000622829 BEAN1Q3B7T3 259 aa12.85□□□□□ -0.35
GTF2IP1-210ENST00000622829 FAM236DA0A1B0GTK5 79 aa12.85□□□□□ -0.35
GTF2IP1-210ENST00000622829 FAM236CP0DP71 79 aa12.85□□□□□ -0.35
GTF2IP1-210ENST00000622829 Q6JHZ5 121 aa12.85□□□□□ -0.35
GTF2IP1-210ENST00000622829 IGHV3OR16-9A0A0B4J2B5 98 aa12.84□□□□□ -0.35
GTF2IP1-210ENST00000622829 JMJD7-PLA2G4BH0Y9G9 81 aa12.84□□□□□ -0.35
GTF2IP1-210ENST00000622829 C3orf84H3BNL1 204 aa12.84□□□□□ -0.35
GTF2IP1-210ENST00000622829 DEFB121Q5J5C9 76 aa12.84□□□□□ -0.35
GTF2IP1-210ENST00000622829 FAM222AQ5U5X8 452 aa12.84□□□□□ -0.35
GTF2IP1-210ENST00000622829 NOTCH1P46531 2555 aa12.84□□□□□ -0.35
GTF2IP1-210ENST00000622829 PRR4Q16378 134 aa12.84□□□□□ -0.35
GTF2IP1-210ENST00000622829 DSCR9P59020 149 aa12.83□□□□□ -0.35
GTF2IP1-210ENST00000622829 KLK9Q2XQG4 91 aa12.83□□□□□ -0.36
GTF2IP1-210ENST00000622829 CCKP06307 115 aa12.83□□□□□ -0.36
GTF2IP1-210ENST00000622829 TMEM258P61165 79 aa12.83□□□□□ -0.36
GTF2IP1-210ENST00000622829 Q8N814 137 aa12.83□□□□□ -0.36
GTF2IP1-210ENST00000622829 DNAJC9-AS1A6NH13 148 aa12.82□□□□□ -0.36
GTF2IP1-210ENST00000622829 LINC01006Q8NI28 216 aa12.82□□□□□ -0.36
GTF2IP1-210ENST00000622829 F8WEM9 126 aa12.81□□□□□ -0.36
GTF2IP1-210ENST00000622829 REG3AQ06141 175 aa12.81□□□□□ -0.36
GTF2IP1-210ENST00000622829 MGAM2Q2M2H8 2515 aa12.81□□□□□ -0.36
GTF2IP1-210ENST00000622829 ITPR2Q14571 2701 aa12.8□□□□□ -0.36
GTF2IP1-210ENST00000622829 A0A087WZ39 114 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 267.9 ms