RNA–Protein interactions for RNA: ENST00000621029.4

SEMA3B-215, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-215ENST00000621029 CDKN2A-AS1Q9UH64 79 aa17.9■□□□□ 0.46
SEMA3B-215ENST00000621029 CARHSP1Q9Y2V2 147 aaKnown RBP17.9■□□□□ 0.46
SEMA3B-215ENST00000621029 SRSF9Q13242 221 aaKnown RBP eCLIP17.89■□□□□ 0.45
SEMA3B-215ENST00000621029 C1orf137Q5JT78 98 aa17.89■□□□□ 0.45
SEMA3B-215ENST00000621029 SMCO4Q9NRQ5 59 aa17.89■□□□□ 0.45
SEMA3B-215ENST00000621029 HMCN2Q8NDA2 5059 aa17.89■□□□□ 0.45
SEMA3B-215ENST00000621029 NDUFC2-KCTD14E9PQ53 114 aa17.88■□□□□ 0.45
SEMA3B-215ENST00000621029 Q8IZM0 81 aa17.87■□□□□ 0.45
SEMA3B-215ENST00000621029 LINC01549A6NIU2 74 aa17.86■□□□□ 0.45
SEMA3B-215ENST00000621029 LINC00469Q8N7U9 141 aa17.86■□□□□ 0.45
SEMA3B-215ENST00000621029 LINC01546A6NGU7 62 aa17.82■□□□□ 0.44
SEMA3B-215ENST00000621029 M0QXV9 152 aa17.81■□□□□ 0.44
SEMA3B-215ENST00000621029 UBE2BP63146 152 aa17.81■□□□□ 0.44
SEMA3B-215ENST00000621029 APOC3P02656 99 aa17.8■□□□□ 0.44
SEMA3B-215ENST00000621029 CST9LQ9H4G1 147 aa17.8■□□□□ 0.44
SEMA3B-215ENST00000621029 TINCRA0A1B0GVN0 87 aa17.79■□□□□ 0.44
SEMA3B-215ENST00000621029 C9orf129Q5T035 196 aaKnown RBP17.79■□□□□ 0.44
SEMA3B-215ENST00000621029 TRAPPC1Q9Y5R8 145 aa17.79■□□□□ 0.44
SEMA3B-215ENST00000621029 F8VRH5 84 aa17.78■□□□□ 0.44
SEMA3B-215ENST00000621029 PMVKQ15126 192 aa17.77■□□□□ 0.44
SEMA3B-215ENST00000621029 NDUFA5Q16718 116 aa17.77■□□□□ 0.44
SEMA3B-215ENST00000621029 KRTAP11-1Q8IUC1 163 aa17.76■□□□□ 0.43
SEMA3B-215ENST00000621029 KRTAP7-1Q8IUC3 87 aa17.76■□□□□ 0.43
SEMA3B-215ENST00000621029 SMIM1B2RUZ4 78 aa17.75■□□□□ 0.43
SEMA3B-215ENST00000621029 IGLV7-43P04211 117 aa17.75■□□□□ 0.43
SEMA3B-215ENST00000621029 CXCL5P42830 114 aa17.75■□□□□ 0.43
SEMA3B-215ENST00000621029 NDUFA6P56556 154 aa17.74■□□□□ 0.43
SEMA3B-215ENST00000621029 PDZD11Q5EBL8 140 aa17.74■□□□□ 0.43
SEMA3B-215ENST00000621029 COX7B2Q8TF08 81 aa17.74■□□□□ 0.43
SEMA3B-215ENST00000621029 XAGE1AQ9HD64 81 aa17.74■□□□□ 0.43
SEMA3B-215ENST00000621029 SNAPINO95295 136 aa17.73■□□□□ 0.43
SEMA3B-215ENST00000621029 SPINK8P0C7L1 97 aa17.72■□□□□ 0.43
SEMA3B-215ENST00000621029 KRTAP10-8P60410 259 aa17.72■□□□□ 0.43
SEMA3B-215ENST00000621029 SVBPQ8N300 66 aa17.72■□□□□ 0.43
SEMA3B-215ENST00000621029 DIRC1Q969H9 104 aa17.72■□□□□ 0.43
SEMA3B-215ENST00000621029 IGLV5-45A0A087WSX0 123 aa17.71■□□□□ 0.43
SEMA3B-215ENST00000621029 ODF1Q14990 250 aa17.71■□□□□ 0.43
SEMA3B-215ENST00000621029 LINC00614P0C842 121 aa17.7■□□□□ 0.42
SEMA3B-215ENST00000621029 C18orf32Q8TCD1 76 aa17.7■□□□□ 0.42
SEMA3B-215ENST00000621029 TNXBP22105 4242 aa17.7■□□□□ 0.42
SEMA3B-215ENST00000621029 H3BRM9 83 aa17.69■□□□□ 0.42
SEMA3B-215ENST00000621029 PMCHL1Q16048 86 aa17.66■□□□□ 0.42
SEMA3B-215ENST00000621029 C22orf24Q9Y442 160 aa17.66■□□□□ 0.42
SEMA3B-215ENST00000621029 HBDP02042 147 aa17.65■□□□□ 0.42
SEMA3B-215ENST00000621029 LBHQ53QV2 105 aaPredicted RBP17.65■□□□□ 0.42
SEMA3B-215ENST00000621029 URB1-AS1Q96HZ7 61 aa17.65■□□□□ 0.42
SEMA3B-215ENST00000621029 A0A096LNJ9 63 aa17.64■□□□□ 0.41
SEMA3B-215ENST00000621029 RAB5BP61020 215 aa17.64■□□□□ 0.41
SEMA3B-215ENST00000621029 H0Y9J4 135 aa17.62■□□□□ 0.41
SEMA3B-215ENST00000621029 IGLC3P0DOY3 106 aa17.61■□□□□ 0.41
SEMA3B-215ENST00000621029 ATP5LO75964 103 aa17.6■□□□□ 0.41
SEMA3B-215ENST00000621029 UBR4Q5T4S7 5183 aa17.59■□□□□ 0.41
SEMA3B-215ENST00000621029 MRPL55Q7Z7F7 128 aaKnown RBP17.57■□□□□ 0.4
SEMA3B-215ENST00000621029 BAGE3Q86Y29 109 aa17.56■□□□□ 0.4
SEMA3B-215ENST00000621029 PRR26Q8N8Z3 221 aa17.56■□□□□ 0.4
SEMA3B-215ENST00000621029 ZNF22P17026 224 aaPredicted RBP17.55■□□□□ 0.4
SEMA3B-215ENST00000621029 TP73-AS1Q9UF72 201 aa17.54■□□□□ 0.4
SEMA3B-215ENST00000621029 NUPR1O60356 82 aa17.53■□□□□ 0.4
SEMA3B-215ENST00000621029 PFN2P35080 140 aa17.52■□□□□ 0.4
SEMA3B-215ENST00000621029 TMEM170BQ5T4T1 132 aa17.52■□□□□ 0.4
SEMA3B-215ENST00000621029 IGLV5-39A0A0G2JS06 123 aa17.51■□□□□ 0.39
SEMA3B-215ENST00000621029 GAGE10A6NGK3 116 aa17.5■□□□□ 0.39
SEMA3B-215ENST00000621029 C11orf86A6NJI1 115 aa17.49■□□□□ 0.39
SEMA3B-215ENST00000621029 RPL37AP8A6NKH3 93 aa17.49■□□□□ 0.39
SEMA3B-215ENST00000621029 ZNF861PO60384 105 aa17.49■□□□□ 0.39
SEMA3B-215ENST00000621029 NKAPP1Q8N9T2 125 aa17.49■□□□□ 0.39
SEMA3B-215ENST00000621029 YPEL4Q96NS1 127 aa17.49■□□□□ 0.39
SEMA3B-215ENST00000621029 LINC00167Q96N53 147 aa17.48■□□□□ 0.39
SEMA3B-215ENST00000621029 CHTOPQ9Y3Y2 248 aaKnown RBP17.48■□□□□ 0.39
SEMA3B-215ENST00000621029 CHCHD1Q96BP2 118 aaKnown RBP17.47■□□□□ 0.39
SEMA3B-215ENST00000621029 CBLN2Q8IUK8 224 aa17.46■□□□□ 0.39
SEMA3B-215ENST00000621029 ZNF625Q96I27 306 aaPredicted RBP17.46■□□□□ 0.39
SEMA3B-215ENST00000621029 IGLV1-50A0A075B6I6 118 aa17.45■□□□□ 0.38
SEMA3B-215ENST00000621029 ERG28Q9UKR5 140 aa17.45■□□□□ 0.38
SEMA3B-215ENST00000621029 BCE1O60756 84 aa17.43■□□□□ 0.38
SEMA3B-215ENST00000621029 KRTAP1-4P0C5Y4 121 aa17.43■□□□□ 0.38
SEMA3B-215ENST00000621029 RPL28P46779 137 aaKnown RBP17.43■□□□□ 0.38
SEMA3B-215ENST00000621029 IFI27L1Q96BM0 104 aa17.42■□□□□ 0.38
SEMA3B-215ENST00000621029 IGLV5-37A0A075B6J1 123 aa17.41■□□□□ 0.38
SEMA3B-215ENST00000621029 HSBP1O75506 76 aa17.39■□□□□ 0.37
SEMA3B-215ENST00000621029 SFTA2Q6UW10 78 aa17.39■□□□□ 0.37
SEMA3B-215ENST00000621029 SND1-IT1Q9HBX3 110 aa17.39■□□□□ 0.37
SEMA3B-215ENST00000621029 RPL13AP40429 203 aaKnown RBP17.38■□□□□ 0.37
SEMA3B-215ENST00000621029 COX17Q14061 63 aa17.38■□□□□ 0.37
SEMA3B-215ENST00000621029 TRAV12-1A0A0B4J245 112 aa17.37■□□□□ 0.37
SEMA3B-215ENST00000621029 SCO1O75880 301 aa17.37■□□□□ 0.37
SEMA3B-215ENST00000621029 IGKV2-28A0A075B6P5 120 aa17.36■□□□□ 0.37
SEMA3B-215ENST00000621029 IGKV2D-28P01615 120 aa17.36■□□□□ 0.37
SEMA3B-215ENST00000621029 FAM19A2Q8N3H0 131 aa17.36■□□□□ 0.37
SEMA3B-215ENST00000621029 UBE2AP49459 152 aa17.34■□□□□ 0.37
SEMA3B-215ENST00000621029 RPL24P83731 157 aaKnown RBP17.34■□□□□ 0.37
SEMA3B-215ENST00000621029 TMEM223A0PJW6 202 aa17.33■□□□□ 0.36
SEMA3B-215ENST00000621029 TRGC2P03986 189 aa17.33■□□□□ 0.36
SEMA3B-215ENST00000621029 LINC00158P58513 81 aa17.33■□□□□ 0.36
SEMA3B-215ENST00000621029 H0Y8G0 127 aa17.32■□□□□ 0.36
SEMA3B-215ENST00000621029 LRP2P98164 4655 aa17.32■□□□□ 0.36
SEMA3B-215ENST00000621029 A0A0U1RRA0 63 aa17.3■□□□□ 0.36
SEMA3B-215ENST00000621029 VPREB1P12018 145 aa17.3■□□□□ 0.36
SEMA3B-215ENST00000621029 SLC7A5P1Q8MH63 180 aa17.3■□□□□ 0.36
SEMA3B-215ENST00000621029 ATP6V1G1O75348 118 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms