RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-223	ENST00000617585	CDKN2A-AS1	Q9UH64	79 aa		13.7	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	PRSS2	P07478	247 aa		13.69	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	C1orf137	Q5JT78	98 aa		13.68	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	SCGB3A1	Q96QR1	104 aa		13.68	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	C6orf226	Q5I0X4	101 aa		13.67	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	C9orf129	Q5T035	196 aa	Known RBP	13.67	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	KRTAP11-1	Q8IUC1	163 aa		13.67	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	GEMIN7	Q9H840	131 aa	Known RBP	13.67	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	CKS1B	P61024	79 aa		13.66	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	ODF1	Q14990	250 aa		13.66	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	13.66	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	MRPL18	Q9H0U6	180 aa	Known RBP	13.66	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	IGLV5-45	A0A087WSX0	123 aa		13.65	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	TINCR	A0A1B0GVN0	87 aa		13.65	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	IGLV7-43	P04211	117 aa		13.65	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	TOMM7	Q9P0U1	55 aa		13.65	□□□□□ -0.22
ARHGEF1-223	ENST00000617585	RPS10P5	Q9NQ39	176 aa		13.64	□□□□□ -0.23
ARHGEF1-223	ENST00000617585	FABP9	Q0Z7S8	132 aa		13.63	□□□□□ -0.23
ARHGEF1-223	ENST00000617585	SMIM1	B2RUZ4	78 aa		13.62	□□□□□ -0.23
ARHGEF1-223	ENST00000617585		F8VRH5	84 aa		13.62	□□□□□ -0.23
ARHGEF1-223	ENST00000617585		M0QXV9	152 aa		13.62	□□□□□ -0.23
ARHGEF1-223	ENST00000617585	CXCL5	P42830	114 aa		13.62	□□□□□ -0.23
ARHGEF1-223	ENST00000617585	CST9L	Q9H4G1	147 aa		13.62	□□□□□ -0.23
ARHGEF1-223	ENST00000617585	PDZD11	Q5EBL8	140 aa		13.61	□□□□□ -0.23
ARHGEF1-223	ENST00000617585	FA2H	Q7L5A8	372 aa		13.6	□□□□□ -0.23
ARHGEF1-223	ENST00000617585	LINC00469	Q8N7U9	141 aa		13.6	□□□□□ -0.23
ARHGEF1-223	ENST00000617585	PMVK	Q15126	192 aa		13.59	□□□□□ -0.23
ARHGEF1-223	ENST00000617585	DIRC1	Q969H9	104 aa		13.59	□□□□□ -0.23
ARHGEF1-223	ENST00000617585	SMCO4	Q9NRQ5	59 aa		13.58	□□□□□ -0.24
ARHGEF1-223	ENST00000617585		A0A096LNJ9	63 aa		13.56	□□□□□ -0.24
ARHGEF1-223	ENST00000617585		H0Y9J4	135 aa		13.56	□□□□□ -0.24
ARHGEF1-223	ENST00000617585	URB1-AS1	Q96HZ7	61 aa		13.56	□□□□□ -0.24
ARHGEF1-223	ENST00000617585	UBE2B	P63146	152 aa		13.55	□□□□□ -0.24
ARHGEF1-223	ENST00000617585	C18orf32	Q8TCD1	76 aa		13.55	□□□□□ -0.24
ARHGEF1-223	ENST00000617585	COX7B2	Q8TF08	81 aa		13.55	□□□□□ -0.24
ARHGEF1-223	ENST00000617585	LRP2	P98164	4655 aa		13.55	□□□□□ -0.24
ARHGEF1-223	ENST00000617585	C22orf24	Q9Y442	160 aa		13.54	□□□□□ -0.24
ARHGEF1-223	ENST00000617585	TRAPPC1	Q9Y5R8	145 aa		13.54	□□□□□ -0.24
ARHGEF1-223	ENST00000617585	LINC00614	P0C842	121 aa		13.53	□□□□□ -0.24
ARHGEF1-223	ENST00000617585	XAGE1A	Q9HD64	81 aa		13.53	□□□□□ -0.24
ARHGEF1-223	ENST00000617585	TP73-AS1	Q9UF72	201 aa		13.53	□□□□□ -0.24
ARHGEF1-223	ENST00000617585	IGLC3	P0DOY3	106 aa		13.51	□□□□□ -0.25
ARHGEF1-223	ENST00000617585	SNAPIN	O95295	136 aa		13.5	□□□□□ -0.25
ARHGEF1-223	ENST00000617585	APOC3	P02656	99 aa		13.5	□□□□□ -0.25
ARHGEF1-223	ENST00000617585	LBH	Q53QV2	105 aa	Predicted RBP	13.5	□□□□□ -0.25
ARHGEF1-223	ENST00000617585	SVBP	Q8N300	66 aa		13.5	□□□□□ -0.25
ARHGEF1-223	ENST00000617585		H3BRM9	83 aa		13.49	□□□□□ -0.25
ARHGEF1-223	ENST00000617585	NUPR1	O60356	82 aa		13.49	□□□□□ -0.25
ARHGEF1-223	ENST00000617585	KRTAP1-4	P0C5Y4	121 aa		13.49	□□□□□ -0.25
ARHGEF1-223	ENST00000617585	SPINK8	P0C7L1	97 aa		13.49	□□□□□ -0.25
ARHGEF1-223	ENST00000617585	IGLV5-39	A0A0G2JS06	123 aa		13.48	□□□□□ -0.25
ARHGEF1-223	ENST00000617585	HBD	P02042	147 aa		13.48	□□□□□ -0.25
ARHGEF1-223	ENST00000617585	NDUFA5	Q16718	116 aa		13.47	□□□□□ -0.25
ARHGEF1-223	ENST00000617585	MRPL55	Q7Z7F7	128 aa	Known RBP	13.46	□□□□□ -0.25
ARHGEF1-223	ENST00000617585	YPEL4	Q96NS1	127 aa		13.46	□□□□□ -0.25
ARHGEF1-223	ENST00000617585	IGLV1-50	A0A075B6I6	118 aa		13.45	□□□□□ -0.26
ARHGEF1-223	ENST00000617585	ZNF861P	O60384	105 aa		13.45	□□□□□ -0.26
ARHGEF1-223	ENST00000617585	RAB5B	P61020	215 aa		13.45	□□□□□ -0.26
ARHGEF1-223	ENST00000617585	PRR26	Q8N8Z3	221 aa		13.45	□□□□□ -0.26
ARHGEF1-223	ENST00000617585	IGLV5-37	A0A075B6J1	123 aa		13.44	□□□□□ -0.26
ARHGEF1-223	ENST00000617585	ZNF22	P17026	224 aa	Predicted RBP	13.44	□□□□□ -0.26
ARHGEF1-223	ENST00000617585	ATP5L	O75964	103 aa		13.43	□□□□□ -0.26
ARHGEF1-223	ENST00000617585	NDUFA6	P56556	154 aa		13.41	□□□□□ -0.26
ARHGEF1-223	ENST00000617585	PMCHL1	Q16048	86 aa		13.41	□□□□□ -0.26
ARHGEF1-223	ENST00000617585	LINC00167	Q96N53	147 aa		13.41	□□□□□ -0.26
ARHGEF1-223	ENST00000617585	BCE1	O60756	84 aa		13.38	□□□□□ -0.27
ARHGEF1-223	ENST00000617585	BAGE3	Q86Y29	109 aa		13.38	□□□□□ -0.27
ARHGEF1-223	ENST00000617585	C11orf86	A6NJI1	115 aa		13.37	□□□□□ -0.27
ARHGEF1-223	ENST00000617585	CHCHD1	Q96BP2	118 aa	Known RBP	13.37	□□□□□ -0.27
ARHGEF1-223	ENST00000617585	RPL13A	P40429	203 aa	Known RBP	13.36	□□□□□ -0.27
ARHGEF1-223	ENST00000617585	COX17	Q14061	63 aa		13.36	□□□□□ -0.27
ARHGEF1-223	ENST00000617585	SFTA2	Q6UW10	78 aa		13.36	□□□□□ -0.27
ARHGEF1-223	ENST00000617585	RPL28	P46779	137 aa	Known RBP	13.34	□□□□□ -0.27
ARHGEF1-223	ENST00000617585	ERG28	Q9UKR5	140 aa		13.34	□□□□□ -0.27
ARHGEF1-223	ENST00000617585	TRAV12-1	A0A0B4J245	112 aa		13.33	□□□□□ -0.28
ARHGEF1-223	ENST00000617585	RPL37AP8	A6NKH3	93 aa		13.33	□□□□□ -0.28
ARHGEF1-223	ENST00000617585	PFN2	P35080	140 aa		13.33	□□□□□ -0.28
ARHGEF1-223	ENST00000617585	TMEM170B	Q5T4T1	132 aa		13.32	□□□□□ -0.28
ARHGEF1-223	ENST00000617585	NKAPP1	Q8N9T2	125 aa		13.32	□□□□□ -0.28
ARHGEF1-223	ENST00000617585	ZNF625	Q96I27	306 aa	Predicted RBP	13.32	□□□□□ -0.28
ARHGEF1-223	ENST00000617585	CHTOP	Q9Y3Y2	248 aa	Known RBP	13.32	□□□□□ -0.28
ARHGEF1-223	ENST00000617585	KRTAP13-1	Q8IUC0	172 aa		13.31	□□□□□ -0.28
ARHGEF1-223	ENST00000617585	SND1-IT1	Q9HBX3	110 aa		13.31	□□□□□ -0.28
ARHGEF1-223	ENST00000617585	RNF213	Q63HN8	5207 aa		13.31	□□□□□ -0.28
ARHGEF1-223	ENST00000617585	VPREB1	P12018	145 aa		13.3	□□□□□ -0.28
ARHGEF1-223	ENST00000617585	IFI27L1	Q96BM0	104 aa		13.3	□□□□□ -0.28
ARHGEF1-223	ENST00000617585	GAGE10	A6NGK3	116 aa		13.29	□□□□□ -0.28
ARHGEF1-223	ENST00000617585	LPA	P08519	4548 aa		13.28	□□□□□ -0.28
ARHGEF1-223	ENST00000617585	TMEM223	A0PJW6	202 aa		13.27	□□□□□ -0.29
ARHGEF1-223	ENST00000617585	RPL24	P83731	157 aa	Known RBP	13.26	□□□□□ -0.29
ARHGEF1-223	ENST00000617585	CBLN2	Q8IUK8	224 aa		13.26	□□□□□ -0.29
ARHGEF1-223	ENST00000617585	SCO1	O75880	301 aa		13.24	□□□□□ -0.29
ARHGEF1-223	ENST00000617585		Q8NDZ9	215 aa		13.23	□□□□□ -0.29
ARHGEF1-223	ENST00000617585	IGKV2-28	A0A075B6P5	120 aa		13.22	□□□□□ -0.29
ARHGEF1-223	ENST00000617585		A0A087X002	238 aa		13.22	□□□□□ -0.29
ARHGEF1-223	ENST00000617585	HSBP1	O75506	76 aa		13.22	□□□□□ -0.29
ARHGEF1-223	ENST00000617585	IGKV2D-28	P01615	120 aa		13.22	□□□□□ -0.29
ARHGEF1-223	ENST00000617585	UBE2A	P49459	152 aa		13.21	□□□□□ -0.29
ARHGEF1-223	ENST00000617585	TRGC2	P03986	189 aa		13.2	□□□□□ -0.3
ARHGEF1-223	ENST00000617585	CRYGA	P11844	174 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms