RNA–Protein interactions for RNA: ENST00000616289.1

PDLIM2-219, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-219ENST00000616289 C6orf226Q5I0X4 101 aa6.34□□□□□ -1.39
PDLIM2-219ENST00000616289 ALKBH7Q9BT30 221 aaPredicted RBP6.34□□□□□ -1.39
PDLIM2-219ENST00000616289 CARHSP1Q9Y2V2 147 aaKnown RBP6.34□□□□□ -1.39
PDLIM2-219ENST00000616289 NPSP0C0P6 89 aa6.33□□□□□ -1.4
PDLIM2-219ENST00000616289 ORMDL2Q53FV1 153 aa6.33□□□□□ -1.4
PDLIM2-219ENST00000616289 CTDSP1Q9GZU7 261 aa6.33□□□□□ -1.4
PDLIM2-219ENST00000616289 CDKN2A-AS1Q9UH64 79 aa6.33□□□□□ -1.4
PDLIM2-219ENST00000616289 A0A087X002 238 aa6.32□□□□□ -1.4
PDLIM2-219ENST00000616289 F8VRH5 84 aa6.32□□□□□ -1.4
PDLIM2-219ENST00000616289 HERVK_113P63121 156 aa6.32□□□□□ -1.4
PDLIM2-219ENST00000616289 CLLU1Q5K131 121 aa6.32□□□□□ -1.4
PDLIM2-219ENST00000616289 K7EMI3 77 aa6.31□□□□□ -1.4
PDLIM2-219ENST00000616289 TSPAN13O95857 204 aa6.31□□□□□ -1.4
PDLIM2-219ENST00000616289 PNRC1Q12796 327 aaPredicted RBP6.31□□□□□ -1.4
PDLIM2-219ENST00000616289 LBHQ53QV2 105 aaPredicted RBP6.31□□□□□ -1.4
PDLIM2-219ENST00000616289 MRPL55Q7Z7F7 128 aaKnown RBP6.31□□□□□ -1.4
PDLIM2-219ENST00000616289 TP73-AS1Q9UF72 201 aa6.31□□□□□ -1.4
PDLIM2-219ENST00000616289 BCE1O60756 84 aa6.3□□□□□ -1.4
PDLIM2-219ENST00000616289 SEC11AP67812 179 aa6.3□□□□□ -1.4
PDLIM2-219ENST00000616289 ANAPC16Q96DE5 110 aa6.3□□□□□ -1.4
PDLIM2-219ENST00000616289 TIMM17AQ99595 171 aa6.3□□□□□ -1.4
PDLIM2-219ENST00000616289 GEMIN7Q9H840 131 aaKnown RBP6.3□□□□□ -1.4
PDLIM2-219ENST00000616289 NXT2Q9NPJ8 142 aaKnown RBP6.3□□□□□ -1.4
PDLIM2-219ENST00000616289 SMIM1B2RUZ4 78 aa6.29□□□□□ -1.4
PDLIM2-219ENST00000616289 MT-ND4LP03901 98 aa6.29□□□□□ -1.4
PDLIM2-219ENST00000616289 CXCL5P42830 114 aa6.29□□□□□ -1.4
PDLIM2-219ENST00000616289 RPL28P46779 137 aaKnown RBP6.29□□□□□ -1.4
PDLIM2-219ENST00000616289 RAB14P61106 215 aa6.29□□□□□ -1.4
PDLIM2-219ENST00000616289 PAPPA-AS1Q5QFB9 102 aa6.29□□□□□ -1.4
PDLIM2-219ENST00000616289 TOMM6Q96B49 74 aa6.29□□□□□ -1.4
PDLIM2-219ENST00000616289 RPL37AP8A6NKH3 93 aa6.28□□□□□ -1.4
PDLIM2-219ENST00000616289 CTAG1AP78358 180 aa6.28□□□□□ -1.4
PDLIM2-219ENST00000616289 TYMSOSQ8TAI1 123 aa6.28□□□□□ -1.4
PDLIM2-219ENST00000616289 LINC00167Q96N53 147 aa6.28□□□□□ -1.4
PDLIM2-219ENST00000616289 FAT4Q6V0I7 4981 aa6.27□□□□□ -1.41
PDLIM2-219ENST00000616289 CRYGAP11844 174 aa6.27□□□□□ -1.41
PDLIM2-219ENST00000616289 MUC17Q685J3 4493 aa6.27□□□□□ -1.41
PDLIM2-219ENST00000616289 GAGE10A6NGK3 116 aa6.26□□□□□ -1.41
PDLIM2-219ENST00000616289 ADCYAP1P18509 176 aa6.26□□□□□ -1.41
PDLIM2-219ENST00000616289 G0S2P27469 103 aa6.26□□□□□ -1.41
PDLIM2-219ENST00000616289 KIAA1644Q3SXP7 199 aa6.26□□□□□ -1.41
PDLIM2-219ENST00000616289 ERASQ7Z444 233 aa6.26□□□□□ -1.41
PDLIM2-219ENST00000616289 COX7B2Q8TF08 81 aa6.26□□□□□ -1.41
PDLIM2-219ENST00000616289 ANAPC11Q9NYG5 84 aa6.26□□□□□ -1.41
PDLIM2-219ENST00000616289 IGLV5-45A0A087WSX0 123 aa6.25□□□□□ -1.41
PDLIM2-219ENST00000616289 A0A0U1RQV1 116 aa6.25□□□□□ -1.41
PDLIM2-219ENST00000616289 TINCRA0A1B0GVN0 87 aa6.25□□□□□ -1.41
PDLIM2-219ENST00000616289 KRTAP13-2Q52LG2 175 aa6.25□□□□□ -1.41
PDLIM2-219ENST00000616289 PDZD11Q5EBL8 140 aa6.25□□□□□ -1.41
PDLIM2-219ENST00000616289 KRTAP13-1Q8IUC0 172 aa6.25□□□□□ -1.41
PDLIM2-219ENST00000616289 SCGB3A1Q96QR1 104 aa6.25□□□□□ -1.41
PDLIM2-219ENST00000616289 IGLV5-37A0A075B6J1 123 aa6.24□□□□□ -1.41
PDLIM2-219ENST00000616289 SPINK8P0C7L1 97 aa6.24□□□□□ -1.41
PDLIM2-219ENST00000616289 RAB5BP61020 215 aa6.24□□□□□ -1.41
PDLIM2-219ENST00000616289 SCO1O75880 301 aa6.23□□□□□ -1.41
PDLIM2-219ENST00000616289 UBE2AP49459 152 aa6.23□□□□□ -1.41
PDLIM2-219ENST00000616289 RETNLBQ9BQ08 111 aa6.23□□□□□ -1.41
PDLIM2-219ENST00000616289 IGKV2-28A0A075B6P5 120 aa6.22□□□□□ -1.41
PDLIM2-219ENST00000616289 IGKV2D-28P01615 120 aa6.22□□□□□ -1.41
PDLIM2-219ENST00000616289 NKAPP1Q8N9T2 125 aa6.22□□□□□ -1.41
PDLIM2-219ENST00000616289 CST9LQ9H4G1 147 aa6.22□□□□□ -1.41
PDLIM2-219ENST00000616289 LINC01546A6NGU7 62 aa6.21□□□□□ -1.42
PDLIM2-219ENST00000616289 FAM229BQ4G0N7 80 aa6.21□□□□□ -1.42
PDLIM2-219ENST00000616289 COMMD7Q86VX2 200 aa6.21□□□□□ -1.42
PDLIM2-219ENST00000616289 KRTAP9-2Q9BYQ4 174 aa6.21□□□□□ -1.42
PDLIM2-219ENST00000616289 LINC01549A6NIU2 74 aa6.2□□□□□ -1.42
PDLIM2-219ENST00000616289 ATP5LO75964 103 aa6.2□□□□□ -1.42
PDLIM2-219ENST00000616289 S100A12P80511 92 aa6.2□□□□□ -1.42
PDLIM2-219ENST00000616289 PRLHP81277 87 aa6.2□□□□□ -1.42
PDLIM2-219ENST00000616289 PMVKQ15126 192 aa6.2□□□□□ -1.42
PDLIM2-219ENST00000616289 LCE2AQ5TA79 106 aaPredicted RBP6.2□□□□□ -1.42
PDLIM2-219ENST00000616289 UQCC3Q6UW78 93 aa6.2□□□□□ -1.42
PDLIM2-219ENST00000616289 LINC00304Q8N9R0 145 aa6.2□□□□□ -1.42
PDLIM2-219ENST00000616289 TRAV9-1A0A075B6T8 112 aa6.19□□□□□ -1.42
PDLIM2-219ENST00000616289 PFN2P35080 140 aa6.19□□□□□ -1.42
PDLIM2-219ENST00000616289 MRPL18Q9H0U6 180 aaKnown RBP6.19□□□□□ -1.42
PDLIM2-219ENST00000616289 IGLV5-39A0A0G2JS06 123 aa6.18□□□□□ -1.42
PDLIM2-219ENST00000616289 TMEM238C9JI98 176 aa6.18□□□□□ -1.42
PDLIM2-219ENST00000616289 H3BRM9 83 aa6.18□□□□□ -1.42
PDLIM2-219ENST00000616289 VPREB1P12018 145 aa6.18□□□□□ -1.42
PDLIM2-219ENST00000616289 FAM19A1Q7Z5A9 133 aa6.18□□□□□ -1.42
PDLIM2-219ENST00000616289 GNB1LQ9BYB4 327 aa6.18□□□□□ -1.42
PDLIM2-219ENST00000616289 TMEM126AQ9H061 195 aa6.18□□□□□ -1.42
PDLIM2-219ENST00000616289 IGKV2D-26A0A0A0MRZ7 120 aa6.17□□□□□ -1.42
PDLIM2-219ENST00000616289 IGLC3P0DOY3 106 aa6.17□□□□□ -1.42
PDLIM2-219ENST00000616289 TPRXLQ17RH7 258 aa6.17□□□□□ -1.42
PDLIM2-219ENST00000616289 FA2HQ7L5A8 372 aa6.17□□□□□ -1.42
PDLIM2-219ENST00000616289 Q8NDZ9 215 aa6.17□□□□□ -1.42
PDLIM2-219ENST00000616289 SND1-IT1Q9HBX3 110 aa6.17□□□□□ -1.42
PDLIM2-219ENST00000616289 SMCO4Q9NRQ5 59 aa6.17□□□□□ -1.42
PDLIM2-219ENST00000616289 A0A096LNJ9 63 aa6.16□□□□□ -1.42
PDLIM2-219ENST00000616289 M0R378 163 aa6.16□□□□□ -1.42
PDLIM2-219ENST00000616289 ZNF22P17026 224 aaPredicted RBP6.16□□□□□ -1.42
PDLIM2-219ENST00000616289 ERG28Q9UKR5 140 aa6.16□□□□□ -1.42
PDLIM2-219ENST00000616289 TMEM218A2RU14 115 aa6.15□□□□□ -1.42
PDLIM2-219ENST00000616289 S100PP25815 95 aa6.15□□□□□ -1.42
PDLIM2-219ENST00000616289 C3orf22Q8N5N4 141 aa6.15□□□□□ -1.42
PDLIM2-219ENST00000616289 ZNF625Q96I27 306 aaPredicted RBP6.15□□□□□ -1.42
PDLIM2-219ENST00000616289 CDIP1Q9H305 208 aa6.15□□□□□ -1.42
PDLIM2-219ENST00000616289 IGLV7-46A0A075B6I9 117 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms