RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 LINC01561Q8N1V8 128 aa6.8□□□□□ -1.32
AL353770.3-201ENST00000616253 CRPP02741 224 aa6.79□□□□□ -1.32
AL353770.3-201ENST00000616253 FOXI1Q12951 378 aa6.79□□□□□ -1.32
AL353770.3-201ENST00000616253 ENHOQ6UWT2 76 aa6.79□□□□□ -1.32
AL353770.3-201ENST00000616253 C15orf53Q8NAA6 179 aa6.79□□□□□ -1.32
AL353770.3-201ENST00000616253 B9D2Q9BPU9 175 aa6.79□□□□□ -1.32
AL353770.3-201ENST00000616253 PGPEP1Q9NXJ5 209 aa6.79□□□□□ -1.32
AL353770.3-201ENST00000616253 UBE2WQ96B02 151 aa6.78□□□□□ -1.32
AL353770.3-201ENST00000616253 STAB2Q8WWQ8 2551 aa6.78□□□□□ -1.32
AL353770.3-201ENST00000616253 GAGE12HA6NDE8 117 aa6.78□□□□□ -1.32
AL353770.3-201ENST00000616253 EIF4EBP3O60516 100 aaPredicted RBP6.78□□□□□ -1.32
AL353770.3-201ENST00000616253 FABP2P12104 132 aa6.78□□□□□ -1.32
AL353770.3-201ENST00000616253 MALP21145 153 aa6.78□□□□□ -1.32
AL353770.3-201ENST00000616253 Q8IZM0 81 aa6.78□□□□□ -1.32
AL353770.3-201ENST00000616253 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.77□□□□□ -1.33
AL353770.3-201ENST00000616253 IFITM1P13164 125 aa6.77□□□□□ -1.33
AL353770.3-201ENST00000616253 C6orf226Q5I0X4 101 aa6.77□□□□□ -1.33
AL353770.3-201ENST00000616253 A0A0B4J2C4 111 aa6.77□□□□□ -1.33
AL353770.3-201ENST00000616253 TSPAN13O95857 204 aa6.77□□□□□ -1.33
AL353770.3-201ENST00000616253 MTURNQ8N3F0 131 aa6.77□□□□□ -1.33
AL353770.3-201ENST00000616253 LINC00308Q8TCZ7 52 aa6.77□□□□□ -1.33
AL353770.3-201ENST00000616253 K7EP34 96 aa6.76□□□□□ -1.33
AL353770.3-201ENST00000616253 LINC01556Q5JQF7 62 aa6.76□□□□□ -1.33
AL353770.3-201ENST00000616253 SFTA2Q6UW10 78 aa6.76□□□□□ -1.33
AL353770.3-201ENST00000616253 PRO1854Q9UHT4 67 aa6.76□□□□□ -1.33
AL353770.3-201ENST00000616253 SPCS1Q9Y6A9 102 aa6.76□□□□□ -1.33
AL353770.3-201ENST00000616253 TRAV8-4A0A0B4J246 113 aa6.75□□□□□ -1.33
AL353770.3-201ENST00000616253 KIAA0087Q14695 138 aa6.75□□□□□ -1.33
AL353770.3-201ENST00000616253 C2orf82Q6UX34 121 aa6.75□□□□□ -1.33
AL353770.3-201ENST00000616253 J3QR89 54 aa6.75□□□□□ -1.33
AL353770.3-201ENST00000616253 CFAP161Q6P656 301 aa6.75□□□□□ -1.33
AL353770.3-201ENST00000616253 SOSTDC1Q6X4U4 206 aa6.75□□□□□ -1.33
AL353770.3-201ENST00000616253 COPS9Q8WXC6 57 aa6.75□□□□□ -1.33
AL353770.3-201ENST00000616253 LINC00588Q9Y4M8 146 aa6.75□□□□□ -1.33
AL353770.3-201ENST00000616253 TGP01266 2768 aa6.74□□□□□ -1.33
AL353770.3-201ENST00000616253 IBA57-AS1B1ANH7 110 aa6.74□□□□□ -1.33
AL353770.3-201ENST00000616253 LINC00158P58513 81 aa6.74□□□□□ -1.33
AL353770.3-201ENST00000616253 CKS1BP61024 79 aa6.74□□□□□ -1.33
AL353770.3-201ENST00000616253 MIR7-3HGQ8N6C7 128 aa6.74□□□□□ -1.33
AL353770.3-201ENST00000616253 DNAH10OSP0CZ25 163 aa6.73□□□□□ -1.33
AL353770.3-201ENST00000616253 PFN2P35080 140 aa6.73□□□□□ -1.33
AL353770.3-201ENST00000616253 SIGMAR1Q99720 223 aa6.73□□□□□ -1.33
AL353770.3-201ENST00000616253 ERG28Q9UKR5 140 aa6.73□□□□□ -1.33
AL353770.3-201ENST00000616253 KLK5Q9Y337 293 aaPredicted RBP6.73□□□□□ -1.33
AL353770.3-201ENST00000616253 PRKDCP78527 4128 aaKnown RBP6.73□□□□□ -1.33
AL353770.3-201ENST00000616253 H7C2G1 150 aa6.73□□□□□ -1.33
AL353770.3-201ENST00000616253 CXCL5P42830 114 aa6.73□□□□□ -1.33
AL353770.3-201ENST00000616253 CCL18P55774 89 aa6.73□□□□□ -1.33
AL353770.3-201ENST00000616253 SPAG11BQ08648 103 aa6.73□□□□□ -1.33
AL353770.3-201ENST00000616253 LOC107984156A0A0G2JMH3 177 aa6.72□□□□□ -1.33
AL353770.3-201ENST00000616253 ARL17AQ8IVW1 177 aa6.72□□□□□ -1.33
AL353770.3-201ENST00000616253 DYNC2H1Q8NCM8 4307 aaKnown RBP6.71□□□□□ -1.33
AL353770.3-201ENST00000616253 Q1RN00 199 aa6.71□□□□□ -1.33
AL353770.3-201ENST00000616253 KRTAP26-1Q6PEX3 210 aa6.71□□□□□ -1.33
AL353770.3-201ENST00000616253 NHLRC4P0CG21 123 aaPredicted RBP6.71□□□□□ -1.34
AL353770.3-201ENST00000616253 C6orf223Q8N319 242 aa6.71□□□□□ -1.34
AL353770.3-201ENST00000616253 LINC00526Q96FQ7 95 aa6.71□□□□□ -1.34
AL353770.3-201ENST00000616253 C1orf43Q9BWL3 253 aa6.71□□□□□ -1.34
AL353770.3-201ENST00000616253 PPDPFQ9H3Y8 114 aa6.71□□□□□ -1.34
AL353770.3-201ENST00000616253 RPL13AP40429 203 aaKnown RBP6.7□□□□□ -1.34
AL353770.3-201ENST00000616253 LYRM7Q5U5X0 104 aa6.7□□□□□ -1.34
AL353770.3-201ENST00000616253 IGKV2D-24A0A075B6R9 120 aa6.69□□□□□ -1.34
AL353770.3-201ENST00000616253 PSMB2P49721 201 aa6.69□□□□□ -1.34
AL353770.3-201ENST00000616253 Q9HAA7 133 aa6.69□□□□□ -1.34
AL353770.3-201ENST00000616253 C9orf116Q5BN46 136 aaPredicted RBP6.69□□□□□ -1.34
AL353770.3-201ENST00000616253 C10orf25Q5T742 122 aa6.69□□□□□ -1.34
AL353770.3-201ENST00000616253 UNQ6190/PRO20217Q6UXQ8 127 aa6.69□□□□□ -1.34
AL353770.3-201ENST00000616253 UPK3BQ9BT76 320 aa6.69□□□□□ -1.34
AL353770.3-201ENST00000616253 SND1-IT1Q9HBX3 110 aa6.69□□□□□ -1.34
AL353770.3-201ENST00000616253 DNAH1Q9P2D7 4330 aa6.69□□□□□ -1.34
AL353770.3-201ENST00000616253 H3BMG7 143 aa6.68□□□□□ -1.34
AL353770.3-201ENST00000616253 HIGD2BQ4VC39 106 aa6.68□□□□□ -1.34
AL353770.3-201ENST00000616253 LYSTQ99698 3801 aa6.68□□□□□ -1.34
AL353770.3-201ENST00000616253 TRIAP1O43715 76 aa6.68□□□□□ -1.34
AL353770.3-201ENST00000616253 SCGB1C2P0DMR2 95 aa6.68□□□□□ -1.34
AL353770.3-201ENST00000616253 COX17Q14061 63 aa6.68□□□□□ -1.34
AL353770.3-201ENST00000616253 NTN5Q8WTR8 489 aaPredicted RBP6.68□□□□□ -1.34
AL353770.3-201ENST00000616253 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
AL353770.3-201ENST00000616253 C15orf56Q8N910 161 aa6.67□□□□□ -1.34
AL353770.3-201ENST00000616253 APLNQ9ULZ1 77 aa6.67□□□□□ -1.34
AL353770.3-201ENST00000616253 DNAH7Q8WXX0 4024 aa6.66□□□□□ -1.34
AL353770.3-201ENST00000616253 TRBV30A0A0K0K1B3 111 aa6.66□□□□□ -1.34
AL353770.3-201ENST00000616253 ZNF561-AS1K7EIQ3 104 aa6.66□□□□□ -1.34
AL353770.3-201ENST00000616253 TCL1BO95988 128 aa6.66□□□□□ -1.34
AL353770.3-201ENST00000616253 IGKV2-28A0A075B6P5 120 aa6.66□□□□□ -1.34
AL353770.3-201ENST00000616253 IGKV2D-28P01615 120 aa6.66□□□□□ -1.34
AL353770.3-201ENST00000616253 PLECQ15149 4684 aaKnown RBP6.65□□□□□ -1.34
AL353770.3-201ENST00000616253 TRBV20-1A0A075B6N2 111 aa6.65□□□□□ -1.34
AL353770.3-201ENST00000616253 GVQW2A0A096LPI5 108 aaPredicted RBP6.65□□□□□ -1.34
AL353770.3-201ENST00000616253 F8W1H4 67 aa6.65□□□□□ -1.34
AL353770.3-201ENST00000616253 LINC00337Q8N6G1 96 aa6.65□□□□□ -1.34
AL353770.3-201ENST00000616253 C6orf48Q9UBA6 75 aa6.65□□□□□ -1.34
AL353770.3-201ENST00000616253 TRAV13-2A0A0B4J235 113 aa6.64□□□□□ -1.35
AL353770.3-201ENST00000616253 NUPR2A6NF83 97 aa6.64□□□□□ -1.35
AL353770.3-201ENST00000616253 UBE2DNLQ8IWF7 75 aa6.64□□□□□ -1.35
AL353770.3-201ENST00000616253 CAMK2N2Q96S95 79 aa6.64□□□□□ -1.35
AL353770.3-201ENST00000616253 COX6CP09669 75 aa6.63□□□□□ -1.35
AL353770.3-201ENST00000616253 RMI2Q96E14 147 aa6.63□□□□□ -1.35
AL353770.3-201ENST00000616253 PRO0461Q9UI25 63 aa6.63□□□□□ -1.35
AL353770.3-201ENST00000616253 STARD9Q9P2P6 4700 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms