RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 A0A0J9YXY3 114 aa7.28□□□□□ -1.24
COL4A1-205ENST00000615732 NDUFA1O15239 70 aa7.28□□□□□ -1.24
COL4A1-205ENST00000615732 SMIM13P0DJ93 91 aa7.28□□□□□ -1.24
COL4A1-205ENST00000615732 LINC00269Q8N2A0 174 aa7.28□□□□□ -1.24
COL4A1-205ENST00000615732 C10orf126Q8N4M7 172 aa7.28□□□□□ -1.24
COL4A1-205ENST00000615732 NHP2Q9NX24 153 aaKnown RBP7.28□□□□□ -1.24
COL4A1-205ENST00000615732 COX11Q9Y6N1 276 aa7.28□□□□□ -1.24
COL4A1-205ENST00000615732 TAX1BP3O14907 124 aa7.27□□□□□ -1.25
COL4A1-205ENST00000615732 XCL1P47992 114 aa7.27□□□□□ -1.25
COL4A1-205ENST00000615732 CCL18P55774 89 aa7.27□□□□□ -1.25
COL4A1-205ENST00000615732 REG3AQ06141 175 aa7.27□□□□□ -1.25
COL4A1-205ENST00000615732 Q8N1X5 172 aa7.27□□□□□ -1.25
COL4A1-205ENST00000615732 KRTAP1-5Q9BYS1 174 aa7.27□□□□□ -1.25
COL4A1-205ENST00000615732 IGHV3-30P01768 117 aa7.26□□□□□ -1.25
COL4A1-205ENST00000615732 IGHV3-33P01772 117 aa7.26□□□□□ -1.25
COL4A1-205ENST00000615732 CRPP02741 224 aa7.26□□□□□ -1.25
COL4A1-205ENST00000615732 IGHV3-30-5P0DP03 117 aa7.26□□□□□ -1.25
COL4A1-205ENST00000615732 CIRBPQ14011 172 aaKnown RBP7.26□□□□□ -1.25
COL4A1-205ENST00000615732 C5orf38Q86SI9 138 aa7.26□□□□□ -1.25
COL4A1-205ENST00000615732 COX7B2Q8TF08 81 aa7.26□□□□□ -1.25
COL4A1-205ENST00000615732 Q9H8V8 135 aa7.26□□□□□ -1.25
COL4A1-205ENST00000615732 TOMM7Q9P0U1 55 aa7.26□□□□□ -1.25
COL4A1-205ENST00000615732 A0A087WZ39 114 aa7.25□□□□□ -1.25
COL4A1-205ENST00000615732 IGHV3OR16-9A0A0B4J2B5 98 aa7.25□□□□□ -1.25
COL4A1-205ENST00000615732 K7EP13 123 aa7.25□□□□□ -1.25
COL4A1-205ENST00000615732 TIMM17BO60830 172 aa7.25□□□□□ -1.25
COL4A1-205ENST00000615732 PRSS2P07478 247 aa7.25□□□□□ -1.25
COL4A1-205ENST00000615732 HERV-K104P63124 156 aa7.25□□□□□ -1.25
COL4A1-205ENST00000615732 MEIG1Q5JSS6 88 aa7.25□□□□□ -1.25
COL4A1-205ENST00000615732 Q6ZVH6 145 aa7.25□□□□□ -1.25
COL4A1-205ENST00000615732 LINC01561Q8N1V8 128 aa7.25□□□□□ -1.25
COL4A1-205ENST00000615732 Q8N3U1 123 aa7.25□□□□□ -1.25
COL4A1-205ENST00000615732 RAB37Q96AX2 223 aa7.25□□□□□ -1.25
COL4A1-205ENST00000615732 KLK12Q9UKR0 248 aa7.25□□□□□ -1.25
COL4A1-205ENST00000615732 FAT1Q14517 4588 aa7.24□□□□□ -1.25
COL4A1-205ENST00000615732 K7ERJ3 54 aa7.24□□□□□ -1.25
COL4A1-205ENST00000615732 COX7A2LO14548 114 aa7.24□□□□□ -1.25
COL4A1-205ENST00000615732 RPL24P83731 157 aaKnown RBP7.24□□□□□ -1.25
COL4A1-205ENST00000615732 VAMP3Q15836 100 aa7.24□□□□□ -1.25
COL4A1-205ENST00000615732 CD164L2Q6UWJ8 174 aa7.24□□□□□ -1.25
COL4A1-205ENST00000615732 CHCHD10Q8WYQ3 142 aaPredicted RBP7.24□□□□□ -1.25
COL4A1-205ENST00000615732 SPANXDQ9BXN6 97 aa7.24□□□□□ -1.25
COL4A1-205ENST00000615732 SPANXCQ9NY87 97 aa7.24□□□□□ -1.25
COL4A1-205ENST00000615732 IGLV10-54A0A075B6I4 117 aa7.23□□□□□ -1.25
COL4A1-205ENST00000615732 C9orf118A6NHY6 69 aa7.23□□□□□ -1.25
COL4A1-205ENST00000615732 MALP21145 153 aa7.23□□□□□ -1.25
COL4A1-205ENST00000615732 KRTAP10-2P60368 255 aa7.23□□□□□ -1.25
COL4A1-205ENST00000615732 ESRGQ1W209 222 aa7.23□□□□□ -1.25
COL4A1-205ENST00000615732 WFDC10BQ8IUB3 73 aa7.23□□□□□ -1.25
COL4A1-205ENST00000615732 COPS9Q8WXC6 57 aa7.23□□□□□ -1.25
COL4A1-205ENST00000615732 H3BUT2 72 aa7.22□□□□□ -1.25
COL4A1-205ENST00000615732 MIAQ16674 131 aa7.22□□□□□ -1.25
COL4A1-205ENST00000615732 SFTA2Q6UW10 78 aa7.22□□□□□ -1.25
COL4A1-205ENST00000615732 MUSTN1Q8IVN3 82 aa7.22□□□□□ -1.25
COL4A1-205ENST00000615732 ZNF625Q96I27 306 aaPredicted RBP7.22□□□□□ -1.25
COL4A1-205ENST00000615732 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.21□□□□□ -1.26
COL4A1-205ENST00000615732 GAGE12HA6NDE8 117 aa7.21□□□□□ -1.26
COL4A1-205ENST00000615732 APOMO95445 188 aa7.21□□□□□ -1.26
COL4A1-205ENST00000615732 IFITM1P13164 125 aa7.21□□□□□ -1.26
COL4A1-205ENST00000615732 FUSP35637 526 aaKnown RBP eCLIP7.21□□□□□ -1.26
COL4A1-205ENST00000615732 TTC32Q5I0X7 151 aa7.21□□□□□ -1.26
COL4A1-205ENST00000615732 CFAP161Q6P656 301 aa7.21□□□□□ -1.26
COL4A1-205ENST00000615732 UBE2WQ96B02 151 aa7.21□□□□□ -1.26
COL4A1-205ENST00000615732 LITAFQ99732 161 aa7.21□□□□□ -1.26
COL4A1-205ENST00000615732 MYCBP2O75592 4640 aa7.2□□□□□ -1.26
COL4A1-205ENST00000615732 TRAV8-4A0A0B4J246 113 aa7.2□□□□□ -1.26
COL4A1-205ENST00000615732 A0A1B0GWB2 263 aa7.2□□□□□ -1.26
COL4A1-205ENST00000615732 C6orf226Q5I0X4 101 aa7.2□□□□□ -1.26
COL4A1-205ENST00000615732 NAA38Q9BRA0 125 aaKnown RBP7.2□□□□□ -1.26
COL4A1-205ENST00000615732 PRR34Q9NV39 138 aa7.2□□□□□ -1.26
COL4A1-205ENST00000615732 A0A0U1RRA0 63 aa7.19□□□□□ -1.26
COL4A1-205ENST00000615732 A4D1N5 150 aa7.19□□□□□ -1.26
COL4A1-205ENST00000615732 FABP2P12104 132 aa7.19□□□□□ -1.26
COL4A1-205ENST00000615732 CXCL5P42830 114 aa7.19□□□□□ -1.26
COL4A1-205ENST00000615732 CKS1BP61024 79 aa7.19□□□□□ -1.26
COL4A1-205ENST00000615732 NPC2P61916 151 aa7.19□□□□□ -1.26
COL4A1-205ENST00000615732 FOXI1Q12951 378 aa7.19□□□□□ -1.26
COL4A1-205ENST00000615732 LINC01556Q5JQF7 62 aa7.19□□□□□ -1.26
COL4A1-205ENST00000615732 Q8IZM0 81 aa7.19□□□□□ -1.26
COL4A1-205ENST00000615732 UPK3BQ9BT76 320 aa7.19□□□□□ -1.26
COL4A1-205ENST00000615732 VPS13BQ7Z7G8 4022 aa7.19□□□□□ -1.26
COL4A1-205ENST00000615732 A0A1W2PPM0 123 aa7.18□□□□□ -1.26
COL4A1-205ENST00000615732 ADAMTSL4-AS1Q5T5F5 129 aa7.18□□□□□ -1.26
COL4A1-205ENST00000615732 ENHOQ6UWT2 76 aa7.18□□□□□ -1.26
COL4A1-205ENST00000615732 GTF2H5Q6ZYL4 71 aa7.18□□□□□ -1.26
COL4A1-205ENST00000615732 PGPEP1Q9NXJ5 209 aa7.18□□□□□ -1.26
COL4A1-205ENST00000615732 A0A0B4J2C4 111 aa7.17□□□□□ -1.26
COL4A1-205ENST00000615732 CFC1BP0CG36 223 aa7.17□□□□□ -1.26
COL4A1-205ENST00000615732 CFC1P0CG37 223 aa7.17□□□□□ -1.26
COL4A1-205ENST00000615732 LINC00158P58513 81 aa7.17□□□□□ -1.26
COL4A1-205ENST00000615732 SPAG11BQ08648 103 aa7.17□□□□□ -1.26
COL4A1-205ENST00000615732 DAND5Q8N907 189 aa7.17□□□□□ -1.26
COL4A1-205ENST00000615732 DMBT1Q9UGM3 2413 aaPredicted RBP7.16□□□□□ -1.26
COL4A1-205ENST00000615732 GAGE10A6NGK3 116 aa7.16□□□□□ -1.26
COL4A1-205ENST00000615732 IBA57-AS1B1ANH7 110 aa7.16□□□□□ -1.26
COL4A1-205ENST00000615732 DNAH10OSP0CZ25 163 aa7.16□□□□□ -1.26
COL4A1-205ENST00000615732 UBE2V1Q13404 147 aa7.16□□□□□ -1.26
COL4A1-205ENST00000615732 LYRM7Q5U5X0 104 aa7.16□□□□□ -1.26
COL4A1-205ENST00000615732 Q6ZRN7 208 aaPredicted RBP7.16□□□□□ -1.26
COL4A1-205ENST00000615732 LINC00308Q8TCZ7 52 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms