RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 H3BNG1 76 aa6.65□□□□□ -1.34
CLTCL1-208ENST00000615606 UQCRQO14949 82 aa6.65□□□□□ -1.35
CLTCL1-208ENST00000615606 LINC01561Q8N1V8 128 aa6.65□□□□□ -1.35
CLTCL1-208ENST00000615606 C2orf48Q96LS8 159 aa6.64□□□□□ -1.35
CLTCL1-208ENST00000615606 A0A096LNI7 61 aa6.64□□□□□ -1.35
CLTCL1-208ENST00000615606 C2orf91Q6ZV80 131 aa6.64□□□□□ -1.35
CLTCL1-208ENST00000615606 POM121L12Q8N7R1 296 aa6.64□□□□□ -1.35
CLTCL1-208ENST00000615606 PLAC8L1A1L4L8 177 aa6.64□□□□□ -1.35
CLTCL1-208ENST00000615606 CHKB-CPT1BH3BT56 60 aa6.64□□□□□ -1.35
CLTCL1-208ENST00000615606 BPY2O14599 106 aa6.64□□□□□ -1.35
CLTCL1-208ENST00000615606 UPK3BQ9BT76 320 aa6.64□□□□□ -1.35
CLTCL1-208ENST00000615606 SLPIP03973 132 aa6.64□□□□□ -1.35
CLTCL1-208ENST00000615606 AGRNO00468 2067 aa6.63□□□□□ -1.35
CLTCL1-208ENST00000615606 LINC00310P59036 64 aa6.63□□□□□ -1.35
CLTCL1-208ENST00000615606 COX6A2Q02221 97 aa6.63□□□□□ -1.35
CLTCL1-208ENST00000615606 RPL37AP8A6NKH3 93 aa6.62□□□□□ -1.35
CLTCL1-208ENST00000615606 H0Y9J4 135 aa6.62□□□□□ -1.35
CLTCL1-208ENST00000615606 M0QXV9 152 aa6.62□□□□□ -1.35
CLTCL1-208ENST00000615606 ZNF73O43830 326 aaPredicted RBP6.62□□□□□ -1.35
CLTCL1-208ENST00000615606 LINC01556Q5JQF7 62 aa6.62□□□□□ -1.35
CLTCL1-208ENST00000615606 SDIM1Q6ZPB5 146 aa6.62□□□□□ -1.35
CLTCL1-208ENST00000615606 C6orf223Q8N319 242 aa6.62□□□□□ -1.35
CLTCL1-208ENST00000615606 MDFIQ99750 246 aa6.62□□□□□ -1.35
CLTCL1-208ENST00000615606 PCNTO95613 3336 aa6.62□□□□□ -1.35
CLTCL1-208ENST00000615606 C20orf197Q8N268 126 aa6.62□□□□□ -1.35
CLTCL1-208ENST00000615606 Q8NAQ8 132 aa6.61□□□□□ -1.35
CLTCL1-208ENST00000615606 ESRGQ1W209 222 aa6.61□□□□□ -1.35
CLTCL1-208ENST00000615606 BRK1Q8WUW1 75 aa6.61□□□□□ -1.35
CLTCL1-208ENST00000615606 TRANK1O15050 2925 aa6.61□□□□□ -1.35
CLTCL1-208ENST00000615606 NDUFC2-KCTD14E9PQ53 114 aa6.6□□□□□ -1.35
CLTCL1-208ENST00000615606 RPL28P46779 137 aaKnown RBP6.6□□□□□ -1.35
CLTCL1-208ENST00000615606 LINC00315P59091 139 aa6.6□□□□□ -1.35
CLTCL1-208ENST00000615606 PRRC2CQ9Y520 2896 aaKnown RBP6.6□□□□□ -1.35
CLTCL1-208ENST00000615606 Q6ZQY7 126 aa6.6□□□□□ -1.35
CLTCL1-208ENST00000615606 KRTAP1-1Q07627 177 aa6.6□□□□□ -1.35
CLTCL1-208ENST00000615606 C9orf116Q5BN46 136 aaPredicted RBP6.6□□□□□ -1.35
CLTCL1-208ENST00000615606 SMIM11BQ8TCY0 68 aa6.6□□□□□ -1.35
CLTCL1-208ENST00000615606 A0A096LNJ9 63 aa6.59□□□□□ -1.35
CLTCL1-208ENST00000615606 C3orf22Q8N5N4 141 aa6.59□□□□□ -1.35
CLTCL1-208ENST00000615606 PPDPFQ9H3Y8 114 aa6.59□□□□□ -1.35
CLTCL1-208ENST00000615606 RANBP2P49792 3224 aaKnown RBP6.59□□□□□ -1.35
CLTCL1-208ENST00000615606 ATP5EP2Q5VTU8 51 aa6.59□□□□□ -1.36
CLTCL1-208ENST00000615606 SPATA3Q8NHX4 192 aa6.59□□□□□ -1.36
CLTCL1-208ENST00000615606 ENHOQ6UWT2 76 aa6.58□□□□□ -1.36
CLTCL1-208ENST00000615606 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.58□□□□□ -1.36
CLTCL1-208ENST00000615606 SCXQ7RTU7 201 aa6.58□□□□□ -1.36
CLTCL1-208ENST00000615606 FAM236DA0A1B0GTK5 79 aa6.57□□□□□ -1.36
CLTCL1-208ENST00000615606 FAM236CP0DP71 79 aa6.57□□□□□ -1.36
CLTCL1-208ENST00000615606 WWC2-AS2Q96NR7 200 aa6.57□□□□□ -1.36
CLTCL1-208ENST00000615606 LST1O00453 97 aa6.57□□□□□ -1.36
CLTCL1-208ENST00000615606 NTM-AS1Q6ZSK4 140 aa6.57□□□□□ -1.36
CLTCL1-208ENST00000615606 REG3GQ6UW15 175 aa6.57□□□□□ -1.36
CLTCL1-208ENST00000615606 HELZ2Q9BYK8 2649 aaKnown RBP6.56□□□□□ -1.36
CLTCL1-208ENST00000615606 TRBV10-3A0A0K0K1G6 114 aa6.56□□□□□ -1.36
CLTCL1-208ENST00000615606 TSPEAR-AS2P59090 65 aa6.56□□□□□ -1.36
CLTCL1-208ENST00000615606 IMUPQ9GZP8 106 aa6.56□□□□□ -1.36
CLTCL1-208ENST00000615606 C5orf42Q9H799 3197 aa6.56□□□□□ -1.36
CLTCL1-208ENST00000615606 CCKP06307 115 aa6.56□□□□□ -1.36
CLTCL1-208ENST00000615606 KRTAP10-3P60369 221 aa6.56□□□□□ -1.36
CLTCL1-208ENST00000615606 LINC01546A6NGU7 62 aa6.55□□□□□ -1.36
CLTCL1-208ENST00000615606 A8MTW9 85 aa6.55□□□□□ -1.36
CLTCL1-208ENST00000615606 Q6ZRU5 148 aa6.55□□□□□ -1.36
CLTCL1-208ENST00000615606 IGKV4-1P06312 121 aa6.55□□□□□ -1.36
CLTCL1-208ENST00000615606 K7EIL1 84 aa6.55□□□□□ -1.36
CLTCL1-208ENST00000615606 XGP55808 180 aa6.54□□□□□ -1.36
CLTCL1-208ENST00000615606 ZNF292O60281 2723 aa6.54□□□□□ -1.36
CLTCL1-208ENST00000615606 KRTAP10-11P60412 298 aa6.54□□□□□ -1.36
CLTCL1-208ENST00000615606 MRPL55Q7Z7F7 128 aaKnown RBP6.54□□□□□ -1.36
CLTCL1-208ENST00000615606 C19orf73Q9NVV2 129 aa6.54□□□□□ -1.36
CLTCL1-208ENST00000615606 IGHV3OR16-9A0A0B4J2B5 98 aa6.53□□□□□ -1.36
CLTCL1-208ENST00000615606 SERP2Q8N6R1 65 aa6.53□□□□□ -1.36
CLTCL1-208ENST00000615606 SVIPQ8NHG7 77 aa6.53□□□□□ -1.36
CLTCL1-208ENST00000615606 MPLKIPQ8TAP9 179 aa6.53□□□□□ -1.36
CLTCL1-208ENST00000615606 IGLV9-49A0A0B4J1Y8 123 aa6.53□□□□□ -1.36
CLTCL1-208ENST00000615606 PRYO14603 147 aa6.53□□□□□ -1.36
CLTCL1-208ENST00000615606 C3orf84H3BNL1 204 aa6.52□□□□□ -1.36
CLTCL1-208ENST00000615606 NBDYA0A0U1RRE5 68 aa6.52□□□□□ -1.37
CLTCL1-208ENST00000615606 CSNK1G2-AS1Q8NCQ2 148 aa6.52□□□□□ -1.37
CLTCL1-208ENST00000615606 C1orf137Q5JT78 98 aa6.52□□□□□ -1.37
CLTCL1-208ENST00000615606 IGLV5-39A0A0G2JS06 123 aa6.51□□□□□ -1.37
CLTCL1-208ENST00000615606 CCDC179H3BU77 68 aa6.51□□□□□ -1.37
CLTCL1-208ENST00000615606 ADAMTSL4-AS1Q5T5F5 129 aa6.51□□□□□ -1.37
CLTCL1-208ENST00000615606 FAM240AA0A1B0GVK7 77 aa6.51□□□□□ -1.37
CLTCL1-208ENST00000615606 C10orf25Q5T742 122 aa6.51□□□□□ -1.37
CLTCL1-208ENST00000615606 SPTSSBQ8NFR3 76 aa6.51□□□□□ -1.37
CLTCL1-208ENST00000615606 LINC00588Q9Y4M8 146 aa6.51□□□□□ -1.37
CLTCL1-208ENST00000615606 COX7CP15954 63 aa6.5□□□□□ -1.37
CLTCL1-208ENST00000615606 PRR3P79522 188 aaKnown RBP6.5□□□□□ -1.37
CLTCL1-208ENST00000615606 SPINK6Q6UWN8 80 aa6.49□□□□□ -1.37
CLTCL1-208ENST00000615606 MUC4Q99102 2169 aa6.49□□□□□ -1.37
CLTCL1-208ENST00000615606 HRCT1Q6UXD1 115 aa6.49□□□□□ -1.37
CLTCL1-208ENST00000615606 A0A0U1RQV1 116 aa6.49□□□□□ -1.37
CLTCL1-208ENST00000615606 Q8N814 137 aa6.49□□□□□ -1.37
CLTCL1-208ENST00000615606 NDUFC1O43677 76 aa6.48□□□□□ -1.37
CLTCL1-208ENST00000615606 Q9UF83 564 aa6.48□□□□□ -1.37
CLTCL1-208ENST00000615606 FLNAP21333 2647 aaKnown RBP6.48□□□□□ -1.37
CLTCL1-208ENST00000615606 SEC61GP60059 68 aa6.48□□□□□ -1.37
CLTCL1-208ENST00000615606 Q6Q795 121 aa6.48□□□□□ -1.37
CLTCL1-208ENST00000615606 IGLV5-45A0A087WSX0 123 aa6.48□□□□□ -1.37
CLTCL1-208ENST00000615606 C22orf24Q9Y442 160 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 282.2 ms