RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 TRAV23DV6A0A075B6W5 121 aa7.83□□□□□ -1.16
FAM3A-221ENST00000612856 C20orf197Q8N268 126 aa7.82□□□□□ -1.16
FAM3A-221ENST00000612856 RNASE3P12724 160 aaKnown RBP7.81□□□□□ -1.16
FAM3A-221ENST00000612856 TIRAPP58753 221 aa7.81□□□□□ -1.16
FAM3A-221ENST00000612856 RPL18AQ02543 176 aaKnown RBP7.81□□□□□ -1.16
FAM3A-221ENST00000612856 KPRPQ5T749 579 aaPredicted RBP7.81□□□□□ -1.16
FAM3A-221ENST00000612856 C20orf203Q8NBC4 194 aa7.81□□□□□ -1.16
FAM3A-221ENST00000612856 MIAQ16674 131 aa7.81□□□□□ -1.16
FAM3A-221ENST00000612856 WFDC9Q8NEX5 89 aa7.81□□□□□ -1.16
FAM3A-221ENST00000612856 NBPF19A0A087WUL8 3843 aa7.81□□□□□ -1.16
FAM3A-221ENST00000612856 KRTAP1-3Q8IUG1 177 aa7.81□□□□□ -1.16
FAM3A-221ENST00000612856 POM121L12Q8N7R1 296 aa7.81□□□□□ -1.16
FAM3A-221ENST00000612856 FBN1P35555 2871 aaKnown RBP7.8□□□□□ -1.16
FAM3A-221ENST00000612856 IGLV4-3A0A075B6K6 122 aa7.8□□□□□ -1.16
FAM3A-221ENST00000612856 CAMK2N2Q96S95 79 aa7.8□□□□□ -1.16
FAM3A-221ENST00000612856 IGHV1-58A0A0C4DH39 117 aa7.8□□□□□ -1.16
FAM3A-221ENST00000612856 MDFIQ99750 246 aa7.8□□□□□ -1.16
FAM3A-221ENST00000612856 A0A096LNT2 108 aa7.79□□□□□ -1.16
FAM3A-221ENST00000612856 LINC01546A6NGU7 62 aa7.79□□□□□ -1.16
FAM3A-221ENST00000612856 POLR2KP53803 58 aaKnown RBP7.79□□□□□ -1.16
FAM3A-221ENST00000612856 PIK3CD-AS1Q5SR53 167 aa7.79□□□□□ -1.16
FAM3A-221ENST00000612856 C1orf158Q8N1D5 194 aa7.79□□□□□ -1.16
FAM3A-221ENST00000612856 CDKN2A-AS1Q9UH64 79 aa7.79□□□□□ -1.16
FAM3A-221ENST00000612856 SOCS3O14543 225 aa7.79□□□□□ -1.16
FAM3A-221ENST00000612856 SLPIP03973 132 aa7.79□□□□□ -1.16
FAM3A-221ENST00000612856 CYSRT1A8MQ03 144 aa7.78□□□□□ -1.16
FAM3A-221ENST00000612856 UBE2BP63146 152 aa7.78□□□□□ -1.16
FAM3A-221ENST00000612856 RBMY1BA6NDE4 496 aaKnown RBP7.78□□□□□ -1.16
FAM3A-221ENST00000612856 RBMY1EA6NEQ0 496 aaKnown RBP7.78□□□□□ -1.16
FAM3A-221ENST00000612856 RBMY1DP0C7P1 496 aaKnown RBP7.78□□□□□ -1.16
FAM3A-221ENST00000612856 RBMY1A1P0DJD3 496 aaKnown RBP7.78□□□□□ -1.16
FAM3A-221ENST00000612856 RBMY1CP0DJD4 496 aa7.78□□□□□ -1.16
FAM3A-221ENST00000612856 RBMY1FQ15415 496 aaKnown RBP7.78□□□□□ -1.16
FAM3A-221ENST00000612856 COPS9Q8WXC6 57 aa7.78□□□□□ -1.16
FAM3A-221ENST00000612856 LINC00467Q9BRT7 94 aa7.78□□□□□ -1.16
FAM3A-221ENST00000612856 EIF4EBP3O60516 100 aaPredicted RBP7.78□□□□□ -1.16
FAM3A-221ENST00000612856 HAMPP81172 84 aa7.78□□□□□ -1.16
FAM3A-221ENST00000612856 IMUPQ9GZP8 106 aa7.78□□□□□ -1.16
FAM3A-221ENST00000612856 COX7A2LO14548 114 aa7.77□□□□□ -1.17
FAM3A-221ENST00000612856 GHRHP01286 108 aa7.77□□□□□ -1.17
FAM3A-221ENST00000612856 RBM3P98179 157 aaKnown RBP7.77□□□□□ -1.17
FAM3A-221ENST00000612856 TRBV7-7A0A0K0K1E9 115 aa7.77□□□□□ -1.17
FAM3A-221ENST00000612856 MIFP14174 115 aa7.77□□□□□ -1.17
FAM3A-221ENST00000612856 COX8CQ7Z4L0 72 aa7.77□□□□□ -1.17
FAM3A-221ENST00000612856 FAM240AA0A1B0GVK7 77 aa7.77□□□□□ -1.17
FAM3A-221ENST00000612856 USP17L23D6RBM5 183 aa7.77□□□□□ -1.17
FAM3A-221ENST00000612856 BRK1Q8WUW1 75 aa7.77□□□□□ -1.17
FAM3A-221ENST00000612856 C16orf95Q9H693 158 aa7.77□□□□□ -1.17
FAM3A-221ENST00000612856 LRCOL1A6NCL2 159 aa7.76□□□□□ -1.17
FAM3A-221ENST00000612856 NCR3O14931 201 aa7.76□□□□□ -1.17
FAM3A-221ENST00000612856 ZNF575Q86XF7 245 aa7.76□□□□□ -1.17
FAM3A-221ENST00000612856 SMCR5Q8TEV8 140 aa7.76□□□□□ -1.17
FAM3A-221ENST00000612856 DMBT1Q9UGM3 2413 aaPredicted RBP7.75□□□□□ -1.17
FAM3A-221ENST00000612856 KLLNB2CW77 178 aa7.75□□□□□ -1.17
FAM3A-221ENST00000612856 NKAPP1Q8N9T2 125 aa7.75□□□□□ -1.17
FAM3A-221ENST00000612856 SPATA3Q8NHX4 192 aa7.75□□□□□ -1.17
FAM3A-221ENST00000612856 SERP2Q8N6R1 65 aa7.75□□□□□ -1.17
FAM3A-221ENST00000612856 LINC00308Q8TCZ7 52 aa7.75□□□□□ -1.17
FAM3A-221ENST00000612856 TRBV27A0A0K0K1C4 114 aa7.74□□□□□ -1.17
FAM3A-221ENST00000612856 M0QY20 66 aa7.74□□□□□ -1.17
FAM3A-221ENST00000612856 KRTAP1-1Q07627 177 aa7.74□□□□□ -1.17
FAM3A-221ENST00000612856 Q9UF83 564 aa7.74□□□□□ -1.17
FAM3A-221ENST00000612856 XAGE1AQ9HD64 81 aa7.74□□□□□ -1.17
FAM3A-221ENST00000612856 TMEM258P61165 79 aa7.73□□□□□ -1.17
FAM3A-221ENST00000612856 SPAG11BQ08648 103 aa7.73□□□□□ -1.17
FAM3A-221ENST00000612856 Q8N2B8 174 aa7.73□□□□□ -1.17
FAM3A-221ENST00000612856 REG3AQ06141 175 aa7.73□□□□□ -1.17
FAM3A-221ENST00000612856 LYRM9A8MSI8 78 aa7.72□□□□□ -1.17
FAM3A-221ENST00000612856 DEFB105AQ8NG35 78 aa7.72□□□□□ -1.17
FAM3A-221ENST00000612856 AMELXQ99217 191 aa7.72□□□□□ -1.17
FAM3A-221ENST00000612856 CELA1Q9UNI1 258 aa7.72□□□□□ -1.17
FAM3A-221ENST00000612856 FSHBP01225 129 aa7.72□□□□□ -1.17
FAM3A-221ENST00000612856 KRTAP10-3P60369 221 aa7.72□□□□□ -1.17
FAM3A-221ENST00000612856 SND1-IT1Q9HBX3 110 aa7.72□□□□□ -1.17
FAM3A-221ENST00000612856 SNURFQ9Y675 71 aa7.72□□□□□ -1.17
FAM3A-221ENST00000612856 ENHOQ6UWT2 76 aa7.71□□□□□ -1.17
FAM3A-221ENST00000612856 LAMTOR3Q9UHA4 124 aa7.71□□□□□ -1.17
FAM3A-221ENST00000612856 MPLKIPQ8TAP9 179 aa7.71□□□□□ -1.18
FAM3A-221ENST00000612856 RMI2Q96E14 147 aa7.71□□□□□ -1.18
FAM3A-221ENST00000612856 SPANXDQ9BXN6 97 aa7.71□□□□□ -1.18
FAM3A-221ENST00000612856 TRAV10A0A0B4J240 114 aa7.71□□□□□ -1.18
FAM3A-221ENST00000612856 A0A096LNI7 61 aa7.7□□□□□ -1.18
FAM3A-221ENST00000612856 Q6ZSN1 163 aa7.7□□□□□ -1.18
FAM3A-221ENST00000612856 MIR7-3HGQ8N6C7 128 aa7.7□□□□□ -1.18
FAM3A-221ENST00000612856 UBL5Q9BZL1 73 aa7.7□□□□□ -1.18
FAM3A-221ENST00000612856 CR1P17927 2039 aa7.7□□□□□ -1.18
FAM3A-221ENST00000612856 OTOGQ6ZRI0 2925 aa7.7□□□□□ -1.18
FAM3A-221ENST00000612856 TRBV6-8A0A0A6YYG3 113 aa7.69□□□□□ -1.18
FAM3A-221ENST00000612856 LINC00846Q9NV44 126 aa7.69□□□□□ -1.18
FAM3A-221ENST00000612856 TRAV13-2A0A0B4J235 113 aa7.69□□□□□ -1.18
FAM3A-221ENST00000612856 CHCHD10Q8WYQ3 142 aaPredicted RBP7.69□□□□□ -1.18
FAM3A-221ENST00000612856 TRBV10-1A0A0K0K1A3 114 aa7.69□□□□□ -1.18
FAM3A-221ENST00000612856 FAM236DA0A1B0GTK5 79 aa7.69□□□□□ -1.18
FAM3A-221ENST00000612856 FAM236CP0DP71 79 aa7.69□□□□□ -1.18
FAM3A-221ENST00000612856 SPANXCQ9NY87 97 aa7.68□□□□□ -1.18
FAM3A-221ENST00000612856 PYGO1Q9Y3Y4 419 aa7.68□□□□□ -1.18
FAM3A-221ENST00000612856 FAM19A4Q96LR4 140 aa7.68□□□□□ -1.18
FAM3A-221ENST00000612856 CRYGAP11844 174 aa7.67□□□□□ -1.18
FAM3A-221ENST00000612856 CYSTM1Q9H1C7 97 aa7.67□□□□□ -1.18
FAM3A-221ENST00000612856 CXCL5P42830 114 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms