RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 NDUFC2-KCTD14E9PQ53 114 aa10.63□□□□□ -0.71
PRKN-209ENST00000612485 SEC11AP67812 179 aa10.63□□□□□ -0.71
PRKN-209ENST00000612485 TRAPPC1Q9Y5R8 145 aa10.63□□□□□ -0.71
PRKN-209ENST00000612485 HERVK_113P63121 156 aa10.62□□□□□ -0.71
PRKN-209ENST00000612485 TIMM17AQ99595 171 aa10.62□□□□□ -0.71
PRKN-209ENST00000612485 TOMM7Q9P0U1 55 aa10.62□□□□□ -0.71
PRKN-209ENST00000612485 IGLV7-43P04211 117 aa10.61□□□□□ -0.71
PRKN-209ENST00000612485 CKS1BP61024 79 aa10.61□□□□□ -0.71
PRKN-209ENST00000612485 C6orf226Q5I0X4 101 aa10.61□□□□□ -0.71
PRKN-209ENST00000612485 DIRC1Q969H9 104 aa10.61□□□□□ -0.71
PRKN-209ENST00000612485 TOMM6Q96B49 74 aa10.61□□□□□ -0.71
PRKN-209ENST00000612485 YPEL4Q96NS1 127 aa10.61□□□□□ -0.71
PRKN-209ENST00000612485 M0QXV9 152 aa10.6□□□□□ -0.71
PRKN-209ENST00000612485 ODF1Q14990 250 aa10.6□□□□□ -0.71
PRKN-209ENST00000612485 CBLN2Q8IUK8 224 aa10.6□□□□□ -0.71
PRKN-209ENST00000612485 Q8IZM0 81 aa10.6□□□□□ -0.71
PRKN-209ENST00000612485 GEMIN7Q9H840 131 aaKnown RBP10.6□□□□□ -0.71
PRKN-209ENST00000612485 UBE2BP63146 152 aa10.59□□□□□ -0.71
PRKN-209ENST00000612485 LRP2P98164 4655 aa10.59□□□□□ -0.71
PRKN-209ENST00000612485 SMCO4Q9NRQ5 59 aa10.59□□□□□ -0.71
PRKN-209ENST00000612485 C9orf129Q5T035 196 aaKnown RBP10.58□□□□□ -0.72
PRKN-209ENST00000612485 ERASQ7Z444 233 aa10.58□□□□□ -0.72
PRKN-209ENST00000612485 KRTAP11-1Q8IUC1 163 aa10.58□□□□□ -0.72
PRKN-209ENST00000612485 KRTAP7-1Q8IUC3 87 aa10.58□□□□□ -0.72
PRKN-209ENST00000612485 CDKN2A-AS1Q9UH64 79 aa10.58□□□□□ -0.72
PRKN-209ENST00000612485 LINC01549A6NIU2 74 aa10.57□□□□□ -0.72
PRKN-209ENST00000612485 SCGB3A1Q96QR1 104 aa10.57□□□□□ -0.72
PRKN-209ENST00000612485 LINC01546A6NGU7 62 aa10.55□□□□□ -0.72
PRKN-209ENST00000612485 H0Y9J4 135 aa10.55□□□□□ -0.72
PRKN-209ENST00000612485 FA2HQ7L5A8 372 aa10.55□□□□□ -0.72
PRKN-209ENST00000612485 F8VRH5 84 aa10.54□□□□□ -0.72
PRKN-209ENST00000612485 CXCL5P42830 114 aa10.54□□□□□ -0.72
PRKN-209ENST00000612485 LINC00469Q8N7U9 141 aa10.54□□□□□ -0.72
PRKN-209ENST00000612485 C18orf32Q8TCD1 76 aa10.54□□□□□ -0.72
PRKN-209ENST00000612485 TINCRA0A1B0GVN0 87 aa10.52□□□□□ -0.73
PRKN-209ENST00000612485 URB1-AS1Q96HZ7 61 aa10.52□□□□□ -0.73
PRKN-209ENST00000612485 LBHQ53QV2 105 aaPredicted RBP10.51□□□□□ -0.73
PRKN-209ENST00000612485 PDZD11Q5EBL8 140 aa10.51□□□□□ -0.73
PRKN-209ENST00000612485 XAGE1AQ9HD64 81 aa10.51□□□□□ -0.73
PRKN-209ENST00000612485 SMIM1B2RUZ4 78 aa10.5□□□□□ -0.73
PRKN-209ENST00000612485 LINC00614P0C842 121 aa10.5□□□□□ -0.73
PRKN-209ENST00000612485 PRR26Q8N8Z3 221 aa10.5□□□□□ -0.73
PRKN-209ENST00000612485 C22orf24Q9Y442 160 aa10.5□□□□□ -0.73
PRKN-209ENST00000612485 IGLV5-45A0A087WSX0 123 aa10.49□□□□□ -0.73
PRKN-209ENST00000612485 COX7B2Q8TF08 81 aa10.49□□□□□ -0.73
PRKN-209ENST00000612485 CST9LQ9H4G1 147 aa10.49□□□□□ -0.73
PRKN-209ENST00000612485 IGLV1-50A0A075B6I6 118 aa10.48□□□□□ -0.73
PRKN-209ENST00000612485 NUPR1O60356 82 aa10.48□□□□□ -0.73
PRKN-209ENST00000612485 PMVKQ15126 192 aa10.48□□□□□ -0.73
PRKN-209ENST00000612485 PMCHL1Q16048 86 aa10.47□□□□□ -0.73
PRKN-209ENST00000612485 TP73-AS1Q9UF72 201 aa10.47□□□□□ -0.73
PRKN-209ENST00000612485 A0A096LNJ9 63 aa10.46□□□□□ -0.73
PRKN-209ENST00000612485 COLCA2A8K830 154 aa10.46□□□□□ -0.73
PRKN-209ENST00000612485 TRGC2P03986 189 aa10.46□□□□□ -0.73
PRKN-209ENST00000612485 RAB5BP61020 215 aa10.46□□□□□ -0.73
PRKN-209ENST00000612485 H3BRM9 83 aa10.45□□□□□ -0.74
PRKN-209ENST00000612485 ZNF861PO60384 105 aa10.45□□□□□ -0.74
PRKN-209ENST00000612485 SCO1O75880 301 aa10.45□□□□□ -0.74
PRKN-209ENST00000612485 KRTAP1-4P0C5Y4 121 aa10.45□□□□□ -0.74
PRKN-209ENST00000612485 SPINK8P0C7L1 97 aa10.45□□□□□ -0.74
PRKN-209ENST00000612485 MRPL55Q7Z7F7 128 aaKnown RBP10.45□□□□□ -0.74
PRKN-209ENST00000612485 HBDP02042 147 aa10.43□□□□□ -0.74
PRKN-209ENST00000612485 RPL13AP40429 203 aaKnown RBP10.43□□□□□ -0.74
PRKN-209ENST00000612485 BAGE3Q86Y29 109 aa10.41□□□□□ -0.74
PRKN-209ENST00000612485 CHCHD1Q96BP2 118 aaKnown RBP10.41□□□□□ -0.74
PRKN-209ENST00000612485 RNF213Q63HN8 5207 aa10.41□□□□□ -0.74
PRKN-209ENST00000612485 ATP5LO75964 103 aa10.4□□□□□ -0.74
PRKN-209ENST00000612485 IGLC3P0DOY3 106 aa10.4□□□□□ -0.74
PRKN-209ENST00000612485 NDUFA6P56556 154 aa10.4□□□□□ -0.74
PRKN-209ENST00000612485 BCE1O60756 84 aa10.39□□□□□ -0.75
PRKN-209ENST00000612485 RPL28P46779 137 aaKnown RBP10.39□□□□□ -0.75
PRKN-209ENST00000612485 LINC00167Q96N53 147 aa10.39□□□□□ -0.75
PRKN-209ENST00000612485 IGLV5-37A0A075B6J1 123 aa10.37□□□□□ -0.75
PRKN-209ENST00000612485 IGLV5-39A0A0G2JS06 123 aa10.37□□□□□ -0.75
PRKN-209ENST00000612485 NKAPP1Q8N9T2 125 aa10.37□□□□□ -0.75
PRKN-209ENST00000612485 RPL37AP8A6NKH3 93 aa10.36□□□□□ -0.75
PRKN-209ENST00000612485 HSBP1O75506 76 aa10.36□□□□□ -0.75
PRKN-209ENST00000612485 ZNF22P17026 224 aaPredicted RBP10.36□□□□□ -0.75
PRKN-209ENST00000612485 FAM19A2Q8N3H0 131 aa10.36□□□□□ -0.75
PRKN-209ENST00000612485 LPAP08519 4548 aa10.36□□□□□ -0.75
PRKN-209ENST00000612485 GAGE10A6NGK3 116 aa10.35□□□□□ -0.75
PRKN-209ENST00000612485 SERF1AO75920 110 aa10.34□□□□□ -0.75
PRKN-209ENST00000612485 PFN2P35080 140 aa10.34□□□□□ -0.75
PRKN-209ENST00000612485 LINC00310P59036 64 aa10.34□□□□□ -0.75
PRKN-209ENST00000612485 IFI27L1Q96BM0 104 aa10.32□□□□□ -0.76
PRKN-209ENST00000612485 ERG28Q9UKR5 140 aa10.32□□□□□ -0.76
PRKN-209ENST00000612485 COX17Q14061 63 aa10.31□□□□□ -0.76
PRKN-209ENST00000612485 SFTA2Q6UW10 78 aa10.31□□□□□ -0.76
PRKN-209ENST00000612485 C11orf86A6NJI1 115 aa10.3□□□□□ -0.76
PRKN-209ENST00000612485 UBE2AP49459 152 aa10.3□□□□□ -0.76
PRKN-209ENST00000612485 TMEM170BQ5T4T1 132 aa10.3□□□□□ -0.76
PRKN-209ENST00000612485 CHTOPQ9Y3Y2 248 aaKnown RBP10.3□□□□□ -0.76
PRKN-209ENST00000612485 CRYGAP11844 174 aa10.29□□□□□ -0.76
PRKN-209ENST00000612485 RPL24P83731 157 aaKnown RBP10.29□□□□□ -0.76
PRKN-209ENST00000612485 SND1-IT1Q9HBX3 110 aa10.29□□□□□ -0.76
PRKN-209ENST00000612485 IGKV2-28A0A075B6P5 120 aa10.28□□□□□ -0.76
PRKN-209ENST00000612485 HIST1H2BKO60814 126 aa10.28□□□□□ -0.76
PRKN-209ENST00000612485 IGKV2D-28P01615 120 aa10.28□□□□□ -0.76
PRKN-209ENST00000612485 HIST1H2BJP06899 126 aa10.28□□□□□ -0.76
PRKN-209ENST00000612485 HIST1H2BOP23527 126 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms