RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 CYSTM1Q9H1C7 97 aa10.53□□□□□ -0.72
PCDHGB1-202ENST00000611598 LINC00959A0A1B0GUT2 108 aa10.52□□□□□ -0.73
PCDHGB1-202ENST00000611598 DNAJC9-AS1A6NH13 148 aa10.52□□□□□ -0.73
PCDHGB1-202ENST00000611598 SS18Q15532 418 aa10.52□□□□□ -0.73
PCDHGB1-202ENST00000611598 HELZ2Q9BYK8 2649 aaKnown RBP10.52□□□□□ -0.73
PCDHGB1-202ENST00000611598 C6orf226Q5I0X4 101 aa10.52□□□□□ -0.73
PCDHGB1-202ENST00000611598 CSNK1G2-AS1Q8NCQ2 148 aa10.52□□□□□ -0.73
PCDHGB1-202ENST00000611598 CCDC168Q8NDH2 2452 aa10.52□□□□□ -0.73
PCDHGB1-202ENST00000611598 FN1P02751 2386 aaKnown RBP10.51□□□□□ -0.73
PCDHGB1-202ENST00000611598 LOC107984640A0A0U1RRK4 108 aa10.51□□□□□ -0.73
PCDHGB1-202ENST00000611598 ATOX1O00244 68 aa10.51□□□□□ -0.73
PCDHGB1-202ENST00000611598 XCL1P47992 114 aa10.51□□□□□ -0.73
PCDHGB1-202ENST00000611598 CLPSL2Q6UWE3 100 aa10.51□□□□□ -0.73
PCDHGB1-202ENST00000611598 C19orf73Q9NVV2 129 aa10.51□□□□□ -0.73
PCDHGB1-202ENST00000611598 hADV29S1A0JD25 119 aa10.5□□□□□ -0.73
PCDHGB1-202ENST00000611598 PRR3P79522 188 aaKnown RBP10.5□□□□□ -0.73
PCDHGB1-202ENST00000611598 DEFB113Q30KQ7 82 aa10.5□□□□□ -0.73
PCDHGB1-202ENST00000611598 ESM1Q9NQ30 184 aa10.5□□□□□ -0.73
PCDHGB1-202ENST00000611598 ITPR3Q14573 2671 aa10.5□□□□□ -0.73
PCDHGB1-202ENST00000611598 RPL18AQ02543 176 aaKnown RBP10.5□□□□□ -0.73
PCDHGB1-202ENST00000611598 Q6JHZ5 121 aa10.5□□□□□ -0.73
PCDHGB1-202ENST00000611598 J3QKU1 62 aa10.49□□□□□ -0.73
PCDHGB1-202ENST00000611598 LY6G6DO95868 133 aa10.49□□□□□ -0.73
PCDHGB1-202ENST00000611598 A0A1B0GX51 115 aa10.49□□□□□ -0.73
PCDHGB1-202ENST00000611598 DEFB130BP0DP73 79 aa10.48□□□□□ -0.73
PCDHGB1-202ENST00000611598 DEFB130AP0DP74 79 aa10.48□□□□□ -0.73
PCDHGB1-202ENST00000611598 CRYGAP11844 174 aa10.48□□□□□ -0.73
PCDHGB1-202ENST00000611598 LINC01561Q8N1V8 128 aa10.48□□□□□ -0.73
PCDHGB1-202ENST00000611598 ORMDL1Q9P0S3 153 aa10.48□□□□□ -0.73
PCDHGB1-202ENST00000611598 APCP25054 2843 aa10.47□□□□□ -0.73
PCDHGB1-202ENST00000611598 NANOS2P60321 138 aaKnown RBP10.47□□□□□ -0.73
PCDHGB1-202ENST00000611598 GCN1Q92616 2671 aaKnown RBP10.47□□□□□ -0.73
PCDHGB1-202ENST00000611598 KRTAP1-3Q8IUG1 177 aa10.46□□□□□ -0.73
PCDHGB1-202ENST00000611598 TMEM86BQ8N661 226 aa10.46□□□□□ -0.74
PCDHGB1-202ENST00000611598 NBEAL2Q6ZNJ1 2754 aa10.45□□□□□ -0.74
PCDHGB1-202ENST00000611598 A0A096LPF7 62 aa10.45□□□□□ -0.74
PCDHGB1-202ENST00000611598 IGLV1-51P01701 117 aa10.44□□□□□ -0.74
PCDHGB1-202ENST00000611598 GYPEP15421 78 aa10.44□□□□□ -0.74
PCDHGB1-202ENST00000611598 FLNAP21333 2647 aaKnown RBP10.44□□□□□ -0.74
PCDHGB1-202ENST00000611598 USP17L23D6RBM5 183 aa10.43□□□□□ -0.74
PCDHGB1-202ENST00000611598 CCKP06307 115 aa10.43□□□□□ -0.74
PCDHGB1-202ENST00000611598 Q8IZM0 81 aa10.43□□□□□ -0.74
PCDHGB1-202ENST00000611598 WFDC9Q8NEX5 89 aa10.43□□□□□ -0.74
PCDHGB1-202ENST00000611598 HILS1P60008 231 aa10.42□□□□□ -0.74
PCDHGB1-202ENST00000611598 CMC4P56277 68 aaPredicted RBP10.42□□□□□ -0.74
PCDHGB1-202ENST00000611598 SERP2Q8N6R1 65 aa10.42□□□□□ -0.74
PCDHGB1-202ENST00000611598 Q8N814 137 aa10.42□□□□□ -0.74
PCDHGB1-202ENST00000611598 LINC00167Q96N53 147 aa10.42□□□□□ -0.74
PCDHGB1-202ENST00000611598 LINC01006Q8NI28 216 aa10.41□□□□□ -0.74
PCDHGB1-202ENST00000611598 UPK3BQ9BT76 320 aa10.41□□□□□ -0.74
PCDHGB1-202ENST00000611598 MTORP42345 2549 aa10.41□□□□□ -0.74
PCDHGB1-202ENST00000611598 FASNP49327 2511 aaKnown RBP10.41□□□□□ -0.74
PCDHGB1-202ENST00000611598 C9orf116Q5BN46 136 aaPredicted RBP10.41□□□□□ -0.74
PCDHGB1-202ENST00000611598 Q8N3U1 123 aa10.4□□□□□ -0.74
PCDHGB1-202ENST00000611598 Q8NDZ9 215 aa10.4□□□□□ -0.74
PCDHGB1-202ENST00000611598 WFDC11Q8NEX6 87 aa10.4□□□□□ -0.74
PCDHGB1-202ENST00000611598 J3KT08 172 aa10.4□□□□□ -0.74
PCDHGB1-202ENST00000611598 KIAA0087Q14695 138 aa10.39□□□□□ -0.75
PCDHGB1-202ENST00000611598 KIR2DL5BQ8NHK3 375 aa10.39□□□□□ -0.75
PCDHGB1-202ENST00000611598 IGLV10-54A0A075B6I4 117 aa10.38□□□□□ -0.75
PCDHGB1-202ENST00000611598 A0A1B0GUV1 79 aa10.38□□□□□ -0.75
PCDHGB1-202ENST00000611598 RNASE1P07998 156 aaKnown RBP10.38□□□□□ -0.75
PCDHGB1-202ENST00000611598 ACANP16112 2415 aa10.38□□□□□ -0.75
PCDHGB1-202ENST00000611598 FAM19A5Q7Z5A7 132 aaPredicted RBP10.37□□□□□ -0.75
PCDHGB1-202ENST00000611598 LINC00269Q8N2A0 174 aa10.37□□□□□ -0.75
PCDHGB1-202ENST00000611598 FAM19A1Q7Z5A9 133 aa10.37□□□□□ -0.75
PCDHGB1-202ENST00000611598 JMJD7-PLA2G4BH0Y9G9 81 aa10.36□□□□□ -0.75
PCDHGB1-202ENST00000611598 C6orf99Q4VX62 202 aa10.36□□□□□ -0.75
PCDHGB1-202ENST00000611598 TMEM256-PLSCR3K7ERE1 68 aa10.36□□□□□ -0.75
PCDHGB1-202ENST00000611598 LINC00612Q8N6U2 182 aa10.35□□□□□ -0.75
PCDHGB1-202ENST00000611598 ENHOQ6UWT2 76 aa10.35□□□□□ -0.75
PCDHGB1-202ENST00000611598 TRAV23DV6A0A075B6W5 121 aa10.34□□□□□ -0.75
PCDHGB1-202ENST00000611598 NDUFC2O95298 119 aa10.34□□□□□ -0.75
PCDHGB1-202ENST00000611598 CHCHD10Q8WYQ3 142 aaPredicted RBP10.34□□□□□ -0.75
PCDHGB1-202ENST00000611598 CD164L2Q6UWJ8 174 aa10.33□□□□□ -0.76
PCDHGB1-202ENST00000611598 DSCR8Q96T75 97 aa10.33□□□□□ -0.76
PCDHGB1-202ENST00000611598 PRO0255Q9UI72 69 aa10.33□□□□□ -0.76
PCDHGB1-202ENST00000611598 TMEM258P61165 79 aa10.32□□□□□ -0.76
PCDHGB1-202ENST00000611598 DPH3Q96FX2 82 aa10.32□□□□□ -0.76
PCDHGB1-202ENST00000611598 X6R8D5 127 aa10.32□□□□□ -0.76
PCDHGB1-202ENST00000611598 GHRHP01286 108 aa10.32□□□□□ -0.76
PCDHGB1-202ENST00000611598 OXTP01178 125 aa10.31□□□□□ -0.76
PCDHGB1-202ENST00000611598 ANGP03950 147 aaKnown RBP10.31□□□□□ -0.76
PCDHGB1-202ENST00000611598 COX17Q14061 63 aa10.31□□□□□ -0.76
PCDHGB1-202ENST00000611598 S100A7L2Q5SY68 101 aa10.31□□□□□ -0.76
PCDHGB1-202ENST00000611598 DEFB4AO15263 64 aa10.31□□□□□ -0.76
PCDHGB1-202ENST00000611598 RPS28P62857 69 aaKnown RBP10.31□□□□□ -0.76
PCDHGB1-202ENST00000611598 ANK3Q12955 4377 aaKnown RBP10.31□□□□□ -0.76
PCDHGB1-202ENST00000611598 C10orf25Q5T742 122 aa10.3□□□□□ -0.76
PCDHGB1-202ENST00000611598 C6orf223Q8N319 242 aa10.3□□□□□ -0.76
PCDHGB1-202ENST00000611598 SPATA3Q8NHX4 192 aa10.3□□□□□ -0.76
PCDHGB1-202ENST00000611598 M0R2N4 97 aa10.3□□□□□ -0.76
PCDHGB1-202ENST00000611598 REG3AQ06141 175 aa10.3□□□□□ -0.76
PCDHGB1-202ENST00000611598 LYPD5Q6UWN5 251 aa10.3□□□□□ -0.76
PCDHGB1-202ENST00000611598 LINC00575Q6W349 94 aa10.3□□□□□ -0.76
PCDHGB1-202ENST00000611598 IGHV4-28A0A0C4DH34 117 aa10.29□□□□□ -0.76
PCDHGB1-202ENST00000611598 ATP5EP2Q5VTU8 51 aa10.29□□□□□ -0.76
PCDHGB1-202ENST00000611598 C16orf95Q9H693 158 aa10.29□□□□□ -0.76
PCDHGB1-202ENST00000611598 HECTD1Q9ULT8 2610 aa10.29□□□□□ -0.76
PCDHGB1-202ENST00000611598 UNQ6190/PRO20217Q6UXQ8 127 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms