RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 H3BT86 120 aa5.16□□□□□ -1.58
CSDE1-218ENST00000610726 SLPIP03973 132 aa5.16□□□□□ -1.58
CSDE1-218ENST00000610726 HIGD2AQ9BW72 106 aa5.16□□□□□ -1.58
CSDE1-218ENST00000610726 C6orf99Q4VX62 202 aa5.16□□□□□ -1.58
CSDE1-218ENST00000610726 UNQ6190/PRO20217Q6UXQ8 127 aa5.16□□□□□ -1.58
CSDE1-218ENST00000610726 AMELXQ99217 191 aa5.16□□□□□ -1.58
CSDE1-218ENST00000610726 CELA1Q9UNI1 258 aa5.16□□□□□ -1.58
CSDE1-218ENST00000610726 KALRNO60229 2985 aa5.15□□□□□ -1.58
CSDE1-218ENST00000610726 hADV29S1A0JD25 119 aa5.15□□□□□ -1.58
CSDE1-218ENST00000610726 CYSRT1A8MQ03 144 aa5.15□□□□□ -1.58
CSDE1-218ENST00000610726 C9orf116Q5BN46 136 aaPredicted RBP5.15□□□□□ -1.58
CSDE1-218ENST00000610726 COX7BP24311 80 aa5.15□□□□□ -1.58
CSDE1-218ENST00000610726 FAM19A5Q7Z5A7 132 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-218ENST00000610726 LOC400499M0QZD8 3231 aa5.15□□□□□ -1.59
CSDE1-218ENST00000610726 C14orf177Q52M58 125 aa5.14□□□□□ -1.59
CSDE1-218ENST00000610726 SPANXDQ9BXN6 97 aa5.14□□□□□ -1.59
CSDE1-218ENST00000610726 PKIGQ9Y2B9 76 aa5.14□□□□□ -1.59
CSDE1-218ENST00000610726 IGKV2-28A0A075B6P5 120 aa5.14□□□□□ -1.59
CSDE1-218ENST00000610726 IGKV2D-28P01615 120 aa5.14□□□□□ -1.59
CSDE1-218ENST00000610726 C14orf132Q9NPU4 83 aa5.14□□□□□ -1.59
CSDE1-218ENST00000610726 IGKV3D-7A0A0C4DH55 119 aa5.14□□□□□ -1.59
CSDE1-218ENST00000610726 TEX49A0A1B0GTD5 131 aa5.14□□□□□ -1.59
CSDE1-218ENST00000610726 TIMM17BO60830 172 aa5.14□□□□□ -1.59
CSDE1-218ENST00000610726 FUSP35637 526 aaKnown RBP eCLIP5.14□□□□□ -1.592e-9■□□□□ 9
CSDE1-218ENST00000610726 WFDC10BQ8IUB3 73 aa5.14□□□□□ -1.59
CSDE1-218ENST00000610726 CSDC2Q9Y534 153 aaKnown RBP5.14□□□□□ -1.59
CSDE1-218ENST00000610726 A0A087WZ39 114 aa5.13□□□□□ -1.59
CSDE1-218ENST00000610726 TRACP01848 142 aa5.13□□□□□ -1.59
CSDE1-218ENST00000610726 RBM3P98179 157 aaKnown RBP5.13□□□□□ -1.59
CSDE1-218ENST00000610726 NTM-AS1Q6ZSK4 140 aa5.13□□□□□ -1.59
CSDE1-218ENST00000610726 KRTAP1-3Q8IUG1 177 aa5.13□□□□□ -1.59
CSDE1-218ENST00000610726 Q8IZM0 81 aa5.13□□□□□ -1.59
CSDE1-218ENST00000610726 A0A096LNI7 61 aa5.13□□□□□ -1.59
CSDE1-218ENST00000610726 TRBV30A0A0K0K1B3 111 aa5.13□□□□□ -1.59
CSDE1-218ENST00000610726 TMEM256-PLSCR3K7ERE1 68 aa5.13□□□□□ -1.59
CSDE1-218ENST00000610726 CITED1Q99966 193 aa5.13□□□□□ -1.59
CSDE1-218ENST00000610726 JMJD7-PLA2G4BH0Y9G9 81 aa5.12□□□□□ -1.59
CSDE1-218ENST00000610726 LY6G6CO95867 125 aa5.12□□□□□ -1.59
CSDE1-218ENST00000610726 ADAMTSL4-AS1Q5T5F5 129 aa5.12□□□□□ -1.59
CSDE1-218ENST00000610726 LYPD5Q6UWN5 251 aa5.12□□□□□ -1.59
CSDE1-218ENST00000610726 X6R8D5 127 aa5.12□□□□□ -1.59
CSDE1-218ENST00000610726 ACYP1P07311 99 aa5.11□□□□□ -1.59
CSDE1-218ENST00000610726 PRR3P79522 188 aaKnown RBP5.11□□□□□ -1.59
CSDE1-218ENST00000610726 LRBAP50851 2863 aa5.11□□□□□ -1.59
CSDE1-218ENST00000610726 ITPR1Q14643 2758 aa5.11□□□□□ -1.59
CSDE1-218ENST00000610726 FAM19A1Q7Z5A9 133 aa5.11□□□□□ -1.59
CSDE1-218ENST00000610726 SMIM11BQ8TCY0 68 aa5.11□□□□□ -1.59
CSDE1-218ENST00000610726 BAHCC1Q9P281 2608 aa5.11□□□□□ -1.59
CSDE1-218ENST00000610726 A0A1B0GUV1 79 aa5.11□□□□□ -1.59
CSDE1-218ENST00000610726 NREPQ16612 68 aa5.1□□□□□ -1.59
CSDE1-218ENST00000610726 C6orf223Q8N319 242 aa5.1□□□□□ -1.59
CSDE1-218ENST00000610726 ITPR2Q14571 2701 aa5.1□□□□□ -1.59
CSDE1-218ENST00000610726 RPL37AP8A6NKH3 93 aa5.1□□□□□ -1.59
CSDE1-218ENST00000610726 C9orf153Q5TBE3 101 aa5.1□□□□□ -1.59
CSDE1-218ENST00000610726 TRAV23DV6A0A075B6W5 121 aa5.09□□□□□ -1.59
CSDE1-218ENST00000610726 Q6ZQY7 126 aa5.09□□□□□ -1.59
CSDE1-218ENST00000610726 NBEAL1Q6ZS30 2694 aa5.09□□□□□ -1.59
CSDE1-218ENST00000610726 SBSPONQ8IVN8 264 aa5.09□□□□□ -1.59
CSDE1-218ENST00000610726 KRTAP1-1Q07627 177 aa5.09□□□□□ -1.6
CSDE1-218ENST00000610726 USP34Q70CQ2 3546 aa5.08□□□□□ -1.6
CSDE1-218ENST00000610726 LRCOL1A6NCL2 159 aa5.08□□□□□ -1.6
CSDE1-218ENST00000610726 LST1O00453 97 aa5.08□□□□□ -1.6
CSDE1-218ENST00000610726 USP17L23D6RBM5 183 aa5.08□□□□□ -1.6
CSDE1-218ENST00000610726 COX17Q14061 63 aa5.08□□□□□ -1.6
CSDE1-218ENST00000610726 WFDC9Q8NEX5 89 aa5.08□□□□□ -1.6
CSDE1-218ENST00000610726 M0R378 163 aa5.07□□□□□ -1.6
CSDE1-218ENST00000610726 IGHV3OR16-9A0A0B4J2B5 98 aa5.07□□□□□ -1.6
CSDE1-218ENST00000610726 LINC01546A6NGU7 62 aa5.07□□□□□ -1.6
CSDE1-218ENST00000610726 KRTAP10-3P60369 221 aa5.07□□□□□ -1.6
CSDE1-218ENST00000610726 Q8N3U1 123 aa5.07□□□□□ -1.6
CSDE1-218ENST00000610726 ESRGQ1W209 222 aa5.07□□□□□ -1.6
CSDE1-218ENST00000610726 B9D2Q9BPU9 175 aa5.07□□□□□ -1.6
CSDE1-218ENST00000610726 NBEAL2Q6ZNJ1 2754 aa5.07□□□□□ -1.6
CSDE1-218ENST00000610726 FAM236AA0A1B0GUQ0 79 aa5.06□□□□□ -1.6
CSDE1-218ENST00000610726 FAM236BA0A1B0GV22 79 aa5.06□□□□□ -1.6
CSDE1-218ENST00000610726 NUPR2A6NF83 97 aa5.06□□□□□ -1.6
CSDE1-218ENST00000610726 H3BQ85 93 aa5.06□□□□□ -1.6
CSDE1-218ENST00000610726 EGFEM1PQ0D2K5 195 aa5.06□□□□□ -1.6
CSDE1-218ENST00000610726 PPDPFQ9H3Y8 114 aa5.06□□□□□ -1.6
CSDE1-218ENST00000610726 LOC107984640A0A0U1RRK4 108 aa5.06□□□□□ -1.6
CSDE1-218ENST00000610726 ZNF73O43830 326 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-218ENST00000610726 Q8NAQ8 132 aa5.06□□□□□ -1.6
CSDE1-218ENST00000610726 NDUFS5O43920 106 aa5.06□□□□□ -1.6
CSDE1-218ENST00000610726 TRBV10-3A0A0K0K1G6 114 aa5.05□□□□□ -1.6
CSDE1-218ENST00000610726 MUC3AQ02505 3323 aa5.05□□□□□ -1.6
CSDE1-218ENST00000610726 A0A1B0GX51 115 aa5.04□□□□□ -1.6
CSDE1-218ENST00000610726 MT-ATP8P03928 68 aa5.04□□□□□ -1.6
CSDE1-218ENST00000610726 PDE6GP18545 87 aa5.04□□□□□ -1.6
CSDE1-218ENST00000610726 IGLV5-39A0A0G2JS06 123 aa5.04□□□□□ -1.6
CSDE1-218ENST00000610726 Q6ZRU5 148 aa5.04□□□□□ -1.6
CSDE1-218ENST00000610726 SCXQ7RTU7 201 aa5.04□□□□□ -1.6
CSDE1-218ENST00000610726 CSNK1G2-AS1Q8NCQ2 148 aa5.04□□□□□ -1.6
CSDE1-218ENST00000610726 LINC00643Q86TS7 51 aa5.04□□□□□ -1.6
CSDE1-218ENST00000610726 C19orf73Q9NVV2 129 aa5.04□□□□□ -1.6
CSDE1-218ENST00000610726 CCKP06307 115 aa5.03□□□□□ -1.6
CSDE1-218ENST00000610726 GIG44P09565 113 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-218ENST00000610726 A8MTW9 85 aa5.03□□□□□ -1.6
CSDE1-218ENST00000610726 SDIM1Q6ZPB5 146 aa5.03□□□□□ -1.6
CSDE1-218ENST00000610726 NDUFC2-KCTD14E9PQ53 114 aa5.03□□□□□ -1.6
CSDE1-218ENST00000610726 NDUFB1O75438 58 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms