RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MT-ND4LP03901 98 aa7.85□□□□□ -1.15
RPS28-204ENST00000602140 PNRC1Q12796 327 aaPredicted RBP7.85□□□□□ -1.15
RPS28-204ENST00000602140 PRR4Q16378 134 aa7.85□□□□□ -1.15
RPS28-204ENST00000602140 FAM19A3Q7Z5A8 133 aa7.85□□□□□ -1.15
RPS28-204ENST00000602140 ANAPC16Q96DE5 110 aa7.85□□□□□ -1.15
RPS28-204ENST00000602140 CDKN2A-AS1Q9UH64 79 aa7.85□□□□□ -1.15
RPS28-204ENST00000602140 NUPR1O60356 82 aa7.84□□□□□ -1.15
RPS28-204ENST00000602140 HERVK_113P63121 156 aa7.84□□□□□ -1.15
RPS28-204ENST00000602140 LBHQ53QV2 105 aaPredicted RBP7.84□□□□□ -1.15
RPS28-204ENST00000602140 NXT2Q9NPJ8 142 aaKnown RBP7.84□□□□□ -1.15
RPS28-204ENST00000602140 CARHSP1Q9Y2V2 147 aaKnown RBP7.84□□□□□ -1.15
RPS28-204ENST00000602140 F8VRH5 84 aa7.83□□□□□ -1.16
RPS28-204ENST00000602140 SEC11AP67812 179 aa7.83□□□□□ -1.16
RPS28-204ENST00000602140 PAPPA-AS1Q5QFB9 102 aa7.83□□□□□ -1.16
RPS28-204ENST00000602140 CTDSP1Q9GZU7 261 aa7.83□□□□□ -1.16
RPS28-204ENST00000602140 GEMIN7Q9H840 131 aaKnown RBP7.83□□□□□ -1.16
RPS28-204ENST00000602140 G0S2P27469 103 aa7.81□□□□□ -1.16
RPS28-204ENST00000602140 MRPL55Q7Z7F7 128 aaKnown RBP7.81□□□□□ -1.16
RPS28-204ENST00000602140 TOMM6Q96B49 74 aa7.81□□□□□ -1.16
RPS28-204ENST00000602140 TIMM17AQ99595 171 aa7.81□□□□□ -1.16
RPS28-204ENST00000602140 TP73-AS1Q9UF72 201 aa7.81□□□□□ -1.16
RPS28-204ENST00000602140 CXCL5P42830 114 aa7.8□□□□□ -1.16
RPS28-204ENST00000602140 BCE1O60756 84 aa7.79□□□□□ -1.16
RPS28-204ENST00000602140 TSPAN13O95857 204 aa7.79□□□□□ -1.16
RPS28-204ENST00000602140 RPL28P46779 137 aaKnown RBP7.79□□□□□ -1.16
RPS28-204ENST00000602140 KIAA1644Q3SXP7 199 aa7.79□□□□□ -1.16
RPS28-204ENST00000602140 ERASQ7Z444 233 aa7.79□□□□□ -1.16
RPS28-204ENST00000602140 SCGB3A1Q96QR1 104 aa7.79□□□□□ -1.16
RPS28-204ENST00000602140 A0A087X002 238 aa7.78□□□□□ -1.16
RPS28-204ENST00000602140 RPL37AP8A6NKH3 93 aa7.78□□□□□ -1.16
RPS28-204ENST00000602140 SMIM1B2RUZ4 78 aa7.78□□□□□ -1.16
RPS28-204ENST00000602140 LINC00167Q96N53 147 aa7.78□□□□□ -1.16
RPS28-204ENST00000602140 ADCYAP1P18509 176 aa7.77□□□□□ -1.17
RPS28-204ENST00000602140 RAB14P61106 215 aa7.77□□□□□ -1.17
RPS28-204ENST00000602140 PDZD11Q5EBL8 140 aa7.77□□□□□ -1.17
RPS28-204ENST00000602140 COX7B2Q8TF08 81 aa7.77□□□□□ -1.17
RPS28-204ENST00000602140 TINCRA0A1B0GVN0 87 aa7.76□□□□□ -1.17
RPS28-204ENST00000602140 GAGE10A6NGK3 116 aa7.76□□□□□ -1.17
RPS28-204ENST00000602140 TYMSOSQ8TAI1 123 aa7.76□□□□□ -1.17
RPS28-204ENST00000602140 LCE2BO14633 110 aa7.75□□□□□ -1.17
RPS28-204ENST00000602140 CRYGAP11844 174 aa7.75□□□□□ -1.17
RPS28-204ENST00000602140 RAB5BP61020 215 aa7.75□□□□□ -1.17
RPS28-204ENST00000602140 MUC2Q02817 5179 aa7.74□□□□□ -1.17
RPS28-204ENST00000602140 IGLV5-45A0A087WSX0 123 aa7.74□□□□□ -1.17
RPS28-204ENST00000602140 SPINK8P0C7L1 97 aa7.74□□□□□ -1.17
RPS28-204ENST00000602140 IFITM2Q01629 132 aa7.74□□□□□ -1.17
RPS28-204ENST00000602140 CST9LQ9H4G1 147 aa7.74□□□□□ -1.17
RPS28-204ENST00000602140 ANAPC11Q9NYG5 84 aa7.74□□□□□ -1.17
RPS28-204ENST00000602140 IGLV5-37A0A075B6J1 123 aa7.72□□□□□ -1.17
RPS28-204ENST00000602140 LINC01549A6NIU2 74 aa7.72□□□□□ -1.17
RPS28-204ENST00000602140 NKAPP1Q8N9T2 125 aa7.72□□□□□ -1.17
RPS28-204ENST00000602140 TRAV9-1A0A075B6T8 112 aa7.71□□□□□ -1.18
RPS28-204ENST00000602140 LINC01546A6NGU7 62 aa7.71□□□□□ -1.18
RPS28-204ENST00000602140 UBE2AP49459 152 aa7.71□□□□□ -1.18
RPS28-204ENST00000602140 PMVKQ15126 192 aa7.71□□□□□ -1.18
RPS28-204ENST00000602140 KRTAP13-1Q8IUC0 172 aa7.71□□□□□ -1.18
RPS28-204ENST00000602140 SCO1O75880 301 aa7.7□□□□□ -1.18
RPS28-204ENST00000602140 KRTAP13-2Q52LG2 175 aa7.7□□□□□ -1.18
RPS28-204ENST00000602140 GNB1LQ9BYB4 327 aa7.7□□□□□ -1.18
RPS28-204ENST00000602140 MRPL18Q9H0U6 180 aaKnown RBP7.7□□□□□ -1.18
RPS28-204ENST00000602140 IGKV2-28A0A075B6P5 120 aa7.69□□□□□ -1.18
RPS28-204ENST00000602140 H3BRM9 83 aa7.69□□□□□ -1.18
RPS28-204ENST00000602140 ATP5LO75964 103 aa7.69□□□□□ -1.18
RPS28-204ENST00000602140 IGKV2D-28P01615 120 aa7.69□□□□□ -1.18
RPS28-204ENST00000602140 CLLU1Q5K131 121 aa7.69□□□□□ -1.18
RPS28-204ENST00000602140 FA2HQ7L5A8 372 aa7.69□□□□□ -1.18
RPS28-204ENST00000602140 A0A0U1RQV1 116 aa7.68□□□□□ -1.18
RPS28-204ENST00000602140 TMEM218A2RU14 115 aa7.68□□□□□ -1.18
RPS28-204ENST00000602140 S100PP25815 95 aa7.68□□□□□ -1.18
RPS28-204ENST00000602140 PFN2P35080 140 aa7.68□□□□□ -1.18
RPS28-204ENST00000602140 SMCO4Q9NRQ5 59 aa7.68□□□□□ -1.18
RPS28-204ENST00000602140 NDUFA5Q16718 116 aa7.67□□□□□ -1.18
RPS28-204ENST00000602140 FAM229BQ4G0N7 80 aa7.67□□□□□ -1.18
RPS28-204ENST00000602140 RETNLBQ9BQ08 111 aa7.67□□□□□ -1.18
RPS28-204ENST00000602140 IGLV5-39A0A0G2JS06 123 aa7.66□□□□□ -1.18
RPS28-204ENST00000602140 IGLC3P0DOY3 106 aa7.66□□□□□ -1.18
RPS28-204ENST00000602140 PRLHP81277 87 aa7.66□□□□□ -1.18
RPS28-204ENST00000602140 FABP9Q0Z7S8 132 aa7.66□□□□□ -1.18
RPS28-204ENST00000602140 UQCC3Q6UW78 93 aa7.66□□□□□ -1.18
RPS28-204ENST00000602140 LINC00304Q8N9R0 145 aa7.66□□□□□ -1.18
RPS28-204ENST00000602140 VPREB1P12018 145 aa7.65□□□□□ -1.18
RPS28-204ENST00000602140 NDUFA6P56556 154 aa7.65□□□□□ -1.18
RPS28-204ENST00000602140 COX19Q49B96 90 aa7.65□□□□□ -1.18
RPS28-204ENST00000602140 SND1-IT1Q9HBX3 110 aa7.65□□□□□ -1.18
RPS28-204ENST00000602140 IGKV2D-26A0A0A0MRZ7 120 aa7.64□□□□□ -1.19
RPS28-204ENST00000602140 TMEM238C9JI98 176 aa7.64□□□□□ -1.19
RPS28-204ENST00000602140 ZNF22P17026 224 aaPredicted RBP7.64□□□□□ -1.19
RPS28-204ENST00000602140 FAM19A1Q7Z5A9 133 aa7.64□□□□□ -1.19
RPS28-204ENST00000602140 SEC11CQ9BY50 192 aa7.64□□□□□ -1.19
RPS28-204ENST00000602140 TMEM126AQ9H061 195 aa7.64□□□□□ -1.19
RPS28-204ENST00000602140 ERG28Q9UKR5 140 aa7.64□□□□□ -1.19
RPS28-204ENST00000602140 A0A096LNJ9 63 aa7.63□□□□□ -1.19
RPS28-204ENST00000602140 ZNF625Q96I27 306 aaPredicted RBP7.63□□□□□ -1.19
RPS28-204ENST00000602140 RPL24P83731 157 aaKnown RBP7.62□□□□□ -1.19
RPS28-204ENST00000602140 COX17Q14061 63 aa7.62□□□□□ -1.19
RPS28-204ENST00000602140 M0R378 163 aa7.61□□□□□ -1.19
RPS28-204ENST00000602140 Q8NDZ9 215 aa7.61□□□□□ -1.19
RPS28-204ENST00000602140 LINC00614P0C842 121 aa7.6□□□□□ -1.19
RPS28-204ENST00000602140 PLEKHB2Q96CS7 222 aa7.6□□□□□ -1.19
RPS28-204ENST00000602140 URB1-AS1Q96HZ7 61 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms