RNA–Protein interactions for RNA: ENST00000601011.1

NOTCH3-206, Transcript of notch 3, humanhuman

TSL 5

Gene NOTCH3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-206ENST00000601011 CHCHD7Q9BUK0 85 aa9.08□□□□□ -0.96
NOTCH3-206ENST00000601011 TRAV23DV6A0A075B6W5 121 aa9.07□□□□□ -0.96
NOTCH3-206ENST00000601011 TRBV6-5A0A0K0K1A5 114 aa9.07□□□□□ -0.96
NOTCH3-206ENST00000601011 IGLV1-51P01701 117 aa9.07□□□□□ -0.96
NOTCH3-206ENST00000601011 XAGE1AQ9HD64 81 aa9.07□□□□□ -0.96
NOTCH3-206ENST00000601011 NCR3O14931 201 aa9.07□□□□□ -0.96
NOTCH3-206ENST00000601011 COX7B2Q8TF08 81 aa9.07□□□□□ -0.96
NOTCH3-206ENST00000601011 MIAQ16674 131 aa9.06□□□□□ -0.96
NOTCH3-206ENST00000601011 COPS9Q8WXC6 57 aa9.06□□□□□ -0.96
NOTCH3-206ENST00000601011 PRO0255Q9UI72 69 aa9.06□□□□□ -0.96
NOTCH3-206ENST00000601011 LINC00242Q5T6M2 205 aa9.06□□□□□ -0.96
NOTCH3-206ENST00000601011 C11orf72Q8NBR9 251 aa9.06□□□□□ -0.96
NOTCH3-206ENST00000601011 SPART-AS1P0CW21 52 aa9.06□□□□□ -0.96
NOTCH3-206ENST00000601011 TRACP01848 142 aa9.05□□□□□ -0.96
NOTCH3-206ENST00000601011 PPDPFQ9H3Y8 114 aa9.05□□□□□ -0.96
NOTCH3-206ENST00000601011 TRBV6-8A0A0A6YYG3 113 aa9.05□□□□□ -0.96
NOTCH3-206ENST00000601011 M0QXV9 152 aa9.05□□□□□ -0.96
NOTCH3-206ENST00000601011 FSHBP01225 129 aa9.05□□□□□ -0.96
NOTCH3-206ENST00000601011 NTM-AS1Q6ZSK4 140 aa9.05□□□□□ -0.96
NOTCH3-206ENST00000601011 DNAJC30Q96LL9 226 aa9.05□□□□□ -0.96
NOTCH3-206ENST00000601011 TRRAPQ9Y4A5 3859 aa9.05□□□□□ -0.96
NOTCH3-206ENST00000601011 ZNF561-AS1K7EIQ3 104 aa9.05□□□□□ -0.96
NOTCH3-206ENST00000601011 IGHV4-30-4P0DP06 118 aa9.05□□□□□ -0.96
NOTCH3-206ENST00000601011 A0A0B4J2C4 111 aa9.04□□□□□ -0.96
NOTCH3-206ENST00000601011 RNF152Q8N8N0 203 aa9.04□□□□□ -0.96
NOTCH3-206ENST00000601011 EIF4EBP3O60516 100 aaPredicted RBP9.04□□□□□ -0.96
NOTCH3-206ENST00000601011 INAFM2P0DMQ5 153 aa9.03□□□□□ -0.96
NOTCH3-206ENST00000601011 LINC00308Q8TCZ7 52 aa9.03□□□□□ -0.96
NOTCH3-206ENST00000601011 H3BT86 120 aa9.03□□□□□ -0.96
NOTCH3-206ENST00000601011 SCXQ7RTU7 201 aa9.03□□□□□ -0.96
NOTCH3-206ENST00000601011 TRBV10-1A0A0K0K1A3 114 aa9.02□□□□□ -0.97
NOTCH3-206ENST00000601011 KRTAP10-3P60369 221 aa9.02□□□□□ -0.97
NOTCH3-206ENST00000601011 PKD1L1Q8TDX9 2849 aa9.02□□□□□ -0.97
NOTCH3-206ENST00000601011 DSCR8Q96T75 97 aa9.02□□□□□ -0.97
NOTCH3-206ENST00000601011 CELA1Q9UNI1 258 aa9.01□□□□□ -0.97
NOTCH3-206ENST00000601011 COX7A2LO14548 114 aa9.01□□□□□ -0.97
NOTCH3-206ENST00000601011 CDC42SE2Q9NRR3 84 aa9.01□□□□□ -0.97
NOTCH3-206ENST00000601011 REG3AQ06141 175 aa9□□□□□ -0.97
NOTCH3-206ENST00000601011 C20orf197Q8N268 126 aa9□□□□□ -0.97
NOTCH3-206ENST00000601011 TIRAPP58753 221 aa9□□□□□ -0.97
NOTCH3-206ENST00000601011 NANOS2P60321 138 aaKnown RBP9□□□□□ -0.97
NOTCH3-206ENST00000601011 Q8N2B8 174 aa9□□□□□ -0.97
NOTCH3-206ENST00000601011 CHCHD10Q8WYQ3 142 aaPredicted RBP9□□□□□ -0.97
NOTCH3-206ENST00000601011 TRBV30A0A0K0K1B3 111 aa9□□□□□ -0.97
NOTCH3-206ENST00000601011 KRTAP1-1Q07627 177 aa9□□□□□ -0.97
NOTCH3-206ENST00000601011 UBE2DNLQ8IWF7 75 aa8.99□□□□□ -0.97
NOTCH3-206ENST00000601011 DEFB105AQ8NG35 78 aa8.99□□□□□ -0.97
NOTCH3-206ENST00000601011 FHL2Q14192 279 aa8.99□□□□□ -0.97
NOTCH3-206ENST00000601011 LST1O00453 97 aa8.99□□□□□ -0.97
NOTCH3-206ENST00000601011 MRPS36P82909 103 aaKnown RBP8.98□□□□□ -0.97
NOTCH3-206ENST00000601011 RPL18AQ02543 176 aaKnown RBP8.98□□□□□ -0.97
NOTCH3-206ENST00000601011 SPAG11BQ08648 103 aa8.98□□□□□ -0.97
NOTCH3-206ENST00000601011 A8MTW9 85 aa8.98□□□□□ -0.97
NOTCH3-206ENST00000601011 KLK9Q2XQG4 91 aa8.98□□□□□ -0.97
NOTCH3-206ENST00000601011 SMIM1B2RUZ4 78 aa8.97□□□□□ -0.97
NOTCH3-206ENST00000601011 C6orf223Q8N319 242 aa8.97□□□□□ -0.97
NOTCH3-206ENST00000601011 STAB2Q8WWQ8 2551 aa8.97□□□□□ -0.97
NOTCH3-206ENST00000601011 PSCAO43653 123 aa8.97□□□□□ -0.97
NOTCH3-206ENST00000601011 TRAV13-2A0A0B4J235 113 aa8.96□□□□□ -0.97
NOTCH3-206ENST00000601011 CAMK2N2Q96S95 79 aa8.96□□□□□ -0.97
NOTCH3-206ENST00000601011 TRBV6-4A0A1B0GX49 114 aa8.96□□□□□ -0.98
NOTCH3-206ENST00000601011 LINC00643Q86TS7 51 aa8.96□□□□□ -0.98
NOTCH3-206ENST00000601011 C1orf43Q9BWL3 253 aa8.96□□□□□ -0.98
NOTCH3-206ENST00000601011 Q6ZTC4 211 aa8.96□□□□□ -0.98
NOTCH3-206ENST00000601011 LINC00959A0A1B0GUT2 108 aa8.95□□□□□ -0.98
NOTCH3-206ENST00000601011 PYGO1Q9Y3Y4 419 aa8.95□□□□□ -0.98
NOTCH3-206ENST00000601011 GIG44P09565 113 aaPredicted RBP8.95□□□□□ -0.98
NOTCH3-206ENST00000601011 NHLRC4P0CG21 123 aaPredicted RBP8.95□□□□□ -0.98
NOTCH3-206ENST00000601011 ENHOQ6UWT2 76 aa8.95□□□□□ -0.98
NOTCH3-206ENST00000601011 UBL5Q9BZL1 73 aa8.95□□□□□ -0.98
NOTCH3-206ENST00000601011 TENM3Q9P273 2699 aa8.95□□□□□ -0.98
NOTCH3-206ENST00000601011 A0A0J9YWU9 116 aa8.94□□□□□ -0.98
NOTCH3-206ENST00000601011 RBM3P98179 157 aaKnown RBP8.94□□□□□ -0.98
NOTCH3-206ENST00000601011 GHRHP01286 108 aa8.94□□□□□ -0.98
NOTCH3-206ENST00000601011 AMELXQ99217 191 aa8.93□□□□□ -0.98
NOTCH3-206ENST00000601011 UNQ6190/PRO20217Q6UXQ8 127 aa8.93□□□□□ -0.98
NOTCH3-206ENST00000601011 C3orf22Q8N5N4 141 aa8.93□□□□□ -0.98
NOTCH3-206ENST00000601011 SNURFQ9Y675 71 aa8.93□□□□□ -0.98
NOTCH3-206ENST00000601011 DEFB131BA0A096LNP1 70 aa8.93□□□□□ -0.98
NOTCH3-206ENST00000601011 J3KT08 172 aa8.93□□□□□ -0.98
NOTCH3-206ENST00000601011 HRCT1Q6UXD1 115 aa8.93□□□□□ -0.98
NOTCH3-206ENST00000601011 C11orf45Q8TAV5 145 aa8.92□□□□□ -0.98
NOTCH3-206ENST00000601011 ORMDL1Q9P0S3 153 aa8.92□□□□□ -0.98
NOTCH3-206ENST00000601011 BEAN1Q3B7T3 259 aa8.92□□□□□ -0.98
NOTCH3-206ENST00000601011 KPRPQ5T749 579 aaPredicted RBP8.92□□□□□ -0.98
NOTCH3-206ENST00000601011 IGKV2-24A0A0C4DH68 120 aa8.91□□□□□ -0.98
NOTCH3-206ENST00000601011 LINC01546A6NGU7 62 aa8.91□□□□□ -0.98
NOTCH3-206ENST00000601011 CXCL5P42830 114 aa8.91□□□□□ -0.98
NOTCH3-206ENST00000601011 A0A087WYN8 130 aa8.91□□□□□ -0.98
NOTCH3-206ENST00000601011 A0A0U1RQV1 116 aa8.91□□□□□ -0.98
NOTCH3-206ENST00000601011 UQCRQO14949 82 aa8.91□□□□□ -0.98
NOTCH3-206ENST00000601011 NDUFA1O15239 70 aa8.91□□□□□ -0.98
NOTCH3-206ENST00000601011 PKIGQ9Y2B9 76 aa8.91□□□□□ -0.98
NOTCH3-206ENST00000601011 ATOX1O00244 68 aa8.9□□□□□ -0.98
NOTCH3-206ENST00000601011 SMIM11BQ8TCY0 68 aa8.9□□□□□ -0.98
NOTCH3-206ENST00000601011 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.9□□□□□ -0.99
NOTCH3-206ENST00000601011 CCL18P55774 89 aa8.9□□□□□ -0.99
NOTCH3-206ENST00000601011 WFDC10BQ8IUB3 73 aa8.89□□□□□ -0.99
NOTCH3-206ENST00000601011 ACYP1P07311 99 aa8.89□□□□□ -0.99
NOTCH3-206ENST00000601011 KIR2DL5BQ8NHK3 375 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms