RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	PAPPA-AS1	Q5QFB9	102 aa		13	□□□□□ -0.33
FARP1-231	ENST00000600648	TOMM6	Q96B49	74 aa		13	□□□□□ -0.33
FARP1-231	ENST00000600648	SEC11A	P67812	179 aa		12.99	□□□□□ -0.33
FARP1-231	ENST00000600648	CLLU1	Q5K131	121 aa		12.99	□□□□□ -0.33
FARP1-231	ENST00000600648	TIMM17A	Q99595	171 aa		12.99	□□□□□ -0.33
FARP1-231	ENST00000600648	KRTAP1-4	P0C5Y4	121 aa		12.98	□□□□□ -0.33
FARP1-231	ENST00000600648	ADCYAP1	P18509	176 aa		12.98	□□□□□ -0.33
FARP1-231	ENST00000600648	G0S2	P27469	103 aa		12.98	□□□□□ -0.33
FARP1-231	ENST00000600648	IFITM2	Q01629	132 aa		12.98	□□□□□ -0.33
FARP1-231	ENST00000600648	SCGB3A1	Q96QR1	104 aa		12.98	□□□□□ -0.33
FARP1-231	ENST00000600648	C22orf24	Q9Y442	160 aa		12.98	□□□□□ -0.33
FARP1-231	ENST00000600648	IGLV1-50	A0A075B6I6	118 aa		12.96	□□□□□ -0.33
FARP1-231	ENST00000600648		F8VRH5	84 aa		12.96	□□□□□ -0.33
FARP1-231	ENST00000600648	ERAS	Q7Z444	233 aa		12.95	□□□□□ -0.34
FARP1-231	ENST00000600648	TMEM218	A2RU14	115 aa		12.93	□□□□□ -0.34
FARP1-231	ENST00000600648	SMIM1	B2RUZ4	78 aa		12.93	□□□□□ -0.34
FARP1-231	ENST00000600648	ZNF861P	O60384	105 aa		12.92	□□□□□ -0.34
FARP1-231	ENST00000600648	LBH	Q53QV2	105 aa	Predicted RBP	12.92	□□□□□ -0.34
FARP1-231	ENST00000600648	TRAV9-1	A0A075B6T8	112 aa		12.91	□□□□□ -0.34
FARP1-231	ENST00000600648	COX7B2	Q8TF08	81 aa		12.91	□□□□□ -0.34
FARP1-231	ENST00000600648	CXCL5	P42830	114 aa		12.9	□□□□□ -0.34
FARP1-231	ENST00000600648	UQCC3	Q6UW78	93 aa		12.9	□□□□□ -0.34
FARP1-231	ENST00000600648	TINCR	A0A1B0GVN0	87 aa		12.89	□□□□□ -0.35
FARP1-231	ENST00000600648	NUPR1	O60356	82 aa		12.89	□□□□□ -0.35
FARP1-231	ENST00000600648	SPINK8	P0C7L1	97 aa		12.89	□□□□□ -0.35
FARP1-231	ENST00000600648	S100P	P25815	95 aa		12.89	□□□□□ -0.35
FARP1-231	ENST00000600648	MRPL55	Q7Z7F7	128 aa	Known RBP	12.89	□□□□□ -0.35
FARP1-231	ENST00000600648	GNB1L	Q9BYB4	327 aa		12.89	□□□□□ -0.35
FARP1-231	ENST00000600648	PDZD11	Q5EBL8	140 aa		12.88	□□□□□ -0.35
FARP1-231	ENST00000600648	CST9L	Q9H4G1	147 aa		12.88	□□□□□ -0.35
FARP1-231	ENST00000600648	RPL13A	P40429	203 aa	Known RBP	12.87	□□□□□ -0.35
FARP1-231	ENST00000600648	RAB5B	P61020	215 aa		12.87	□□□□□ -0.35
FARP1-231	ENST00000600648	IGLV5-45	A0A087WSX0	123 aa		12.86	□□□□□ -0.35
FARP1-231	ENST00000600648	GAGE10	A6NGK3	116 aa		12.86	□□□□□ -0.35
FARP1-231	ENST00000600648	RPL37AP8	A6NKH3	93 aa		12.86	□□□□□ -0.35
FARP1-231	ENST00000600648	FA2H	Q7L5A8	372 aa		12.86	□□□□□ -0.35
FARP1-231	ENST00000600648	TP73-AS1	Q9UF72	201 aa		12.86	□□□□□ -0.35
FARP1-231	ENST00000600648	LINC01546	A6NGU7	62 aa		12.85	□□□□□ -0.35
FARP1-231	ENST00000600648	FABP9	Q0Z7S8	132 aa		12.85	□□□□□ -0.35
FARP1-231	ENST00000600648	LINC00167	Q96N53	147 aa		12.85	□□□□□ -0.35
FARP1-231	ENST00000600648	SEC11C	Q9BY50	192 aa		12.85	□□□□□ -0.35
FARP1-231	ENST00000600648	SMCO4	Q9NRQ5	59 aa		12.85	□□□□□ -0.35
FARP1-231	ENST00000600648	PMVK	Q15126	192 aa		12.84	□□□□□ -0.35
FARP1-231	ENST00000600648	MRPL18	Q9H0U6	180 aa	Known RBP	12.84	□□□□□ -0.35
FARP1-231	ENST00000600648	BCE1	O60756	84 aa		12.83	□□□□□ -0.36
FARP1-231	ENST00000600648	PRR4	Q16378	134 aa		12.83	□□□□□ -0.36
FARP1-231	ENST00000600648	CARHSP1	Q9Y2V2	147 aa	Known RBP	12.83	□□□□□ -0.36
FARP1-231	ENST00000600648	LINC01549	A6NIU2	74 aa		12.82	□□□□□ -0.36
FARP1-231	ENST00000600648	RPL28	P46779	137 aa	Known RBP	12.82	□□□□□ -0.36
FARP1-231	ENST00000600648	COMMD7	Q86VX2	200 aa		12.8	□□□□□ -0.36
FARP1-231	ENST00000600648	TSPAN13	O95857	204 aa		12.79	□□□□□ -0.36
FARP1-231	ENST00000600648	NDUFA6	P56556	154 aa		12.79	□□□□□ -0.36
FARP1-231	ENST00000600648	COX19	Q49B96	90 aa		12.79	□□□□□ -0.36
FARP1-231	ENST00000600648		H3BRM9	83 aa		12.78	□□□□□ -0.36
FARP1-231	ENST00000600648	NKAPP1	Q8N9T2	125 aa		12.78	□□□□□ -0.36
FARP1-231	ENST00000600648	RPS10P5	Q9NQ39	176 aa		12.78	□□□□□ -0.36
FARP1-231	ENST00000600648		A0A087X002	238 aa		12.77	□□□□□ -0.37
FARP1-231	ENST00000600648	SCO1	O75880	301 aa		12.77	□□□□□ -0.37
FARP1-231	ENST00000600648	ATP5L	O75964	103 aa		12.77	□□□□□ -0.37
FARP1-231	ENST00000600648	PFN2	P35080	140 aa		12.77	□□□□□ -0.37
FARP1-231	ENST00000600648	ANAPC11	Q9NYG5	84 aa		12.75	□□□□□ -0.37
FARP1-231	ENST00000600648	IGLV5-37	A0A075B6J1	123 aa		12.74	□□□□□ -0.37
FARP1-231	ENST00000600648		A0A096LNJ9	63 aa		12.74	□□□□□ -0.37
FARP1-231	ENST00000600648	IGLC3	P0DOY3	106 aa		12.74	□□□□□ -0.37
FARP1-231	ENST00000600648	UBE2A	P49459	152 aa		12.74	□□□□□ -0.37
FARP1-231	ENST00000600648	RHEB	Q15382	184 aa		12.74	□□□□□ -0.37
FARP1-231	ENST00000600648	IGKV2-28	A0A075B6P5	120 aa		12.73	□□□□□ -0.37
FARP1-231	ENST00000600648	IGKV2D-28	P01615	120 aa		12.73	□□□□□ -0.37
FARP1-231	ENST00000600648	CRYGA	P11844	174 aa		12.73	□□□□□ -0.37
FARP1-231	ENST00000600648	PMCHL1	Q16048	86 aa		12.73	□□□□□ -0.37
FARP1-231	ENST00000600648	URB1-AS1	Q96HZ7	61 aa		12.73	□□□□□ -0.37
FARP1-231	ENST00000600648	IGLV5-39	A0A0G2JS06	123 aa		12.72	□□□□□ -0.37
FARP1-231	ENST00000600648	ZNF22	P17026	224 aa	Predicted RBP	12.72	□□□□□ -0.37
FARP1-231	ENST00000600648	C10orf91	Q5T1B1	145 aa		12.72	□□□□□ -0.37
FARP1-231	ENST00000600648	TYMSOS	Q8TAI1	123 aa		12.72	□□□□□ -0.37
FARP1-231	ENST00000600648	C18orf32	Q8TCD1	76 aa		12.71	□□□□□ -0.37
FARP1-231	ENST00000600648	TRAPPC1	Q9Y5R8	145 aa		12.71	□□□□□ -0.37
FARP1-231	ENST00000600648	LINC00614	P0C842	121 aa		12.7	□□□□□ -0.38
FARP1-231	ENST00000600648	ZNF625	Q96I27	306 aa	Predicted RBP	12.7	□□□□□ -0.38
FARP1-231	ENST00000600648	HBD	P02042	147 aa		12.69	□□□□□ -0.38
FARP1-231	ENST00000600648	KRTAP13-1	Q8IUC0	172 aa		12.69	□□□□□ -0.38
FARP1-231	ENST00000600648	SND1-IT1	Q9HBX3	110 aa		12.69	□□□□□ -0.38
FARP1-231	ENST00000600648	ERG28	Q9UKR5	140 aa		12.69	□□□□□ -0.38
FARP1-231	ENST00000600648	C11orf86	A6NJI1	115 aa		12.66	□□□□□ -0.38
FARP1-231	ENST00000600648	VPREB1	P12018	145 aa		12.66	□□□□□ -0.38
FARP1-231	ENST00000600648	PRLH	P81277	87 aa		12.66	□□□□□ -0.38
FARP1-231	ENST00000600648	BAGE3	Q86Y29	109 aa		12.66	□□□□□ -0.38
FARP1-231	ENST00000600648	TMEM238	C9JI98	176 aa		12.65	□□□□□ -0.38
FARP1-231	ENST00000600648	KRTAP13-2	Q52LG2	175 aa		12.65	□□□□□ -0.38
FARP1-231	ENST00000600648	TMEM170B	Q5T4T1	132 aa		12.65	□□□□□ -0.38
FARP1-231	ENST00000600648	FAM19A1	Q7Z5A9	133 aa		12.63	□□□□□ -0.39
FARP1-231	ENST00000600648		Q8NDZ9	215 aa		12.63	□□□□□ -0.39
FARP1-231	ENST00000600648	MUC2	Q02817	5179 aa		12.63	□□□□□ -0.39
FARP1-231	ENST00000600648	RPL24	P83731	157 aa	Known RBP	12.62	□□□□□ -0.39
FARP1-231	ENST00000600648	NDUFA5	Q16718	116 aa		12.62	□□□□□ -0.39
FARP1-231	ENST00000600648	TMEM126A	Q9H061	195 aa		12.62	□□□□□ -0.39
FARP1-231	ENST00000600648	COX17	Q14061	63 aa		12.61	□□□□□ -0.39
FARP1-231	ENST00000600648	APOC3	P02656	99 aa		12.6	□□□□□ -0.39
FARP1-231	ENST00000600648	FAM229B	Q4G0N7	80 aa		12.59	□□□□□ -0.39
FARP1-231	ENST00000600648	CHTOP	Q9Y3Y2	248 aa	Known RBP	12.59	□□□□□ -0.39

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