RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 RAB5BP61020 215 aa10.36□□□□□ -0.75
SMG9-210ENST00000600097 UNQ6190/PRO20217Q6UXQ8 127 aa10.36□□□□□ -0.75
SMG9-210ENST00000600097 FAM104AQ969W3 186 aa10.36□□□□□ -0.75
SMG9-210ENST00000600097 C2orf88Q9BSF0 95 aa10.36□□□□□ -0.75
SMG9-210ENST00000600097 VCX2Q9H322 139 aa10.36□□□□□ -0.75
SMG9-210ENST00000600097 C6orf48Q9UBA6 75 aa10.36□□□□□ -0.75
SMG9-210ENST00000600097 IGIPA6NJ69 53 aa10.35□□□□□ -0.75
SMG9-210ENST00000600097 KRTAP1-4P0C5Y4 121 aa10.35□□□□□ -0.75
SMG9-210ENST00000600097 LINC00614P0C842 121 aa10.35□□□□□ -0.75
SMG9-210ENST00000600097 RPL13AP40429 203 aaKnown RBP10.35□□□□□ -0.75
SMG9-210ENST00000600097 UBE2D1P51668 147 aa10.35□□□□□ -0.75
SMG9-210ENST00000600097 GAGE2EQ4V326 116 aa10.35□□□□□ -0.75
SMG9-210ENST00000600097 TIMM17AQ99595 171 aa10.35□□□□□ -0.75
SMG9-210ENST00000600097 GAGE2DQ9UEU5 116 aa10.35□□□□□ -0.75
SMG9-210ENST00000600097 UBE2BP63146 152 aa10.34□□□□□ -0.75
SMG9-210ENST00000600097 ERASQ7Z444 233 aa10.34□□□□□ -0.75
SMG9-210ENST00000600097 SCGB3A1Q96QR1 104 aa10.34□□□□□ -0.75
SMG9-210ENST00000600097 M0QXV9 152 aa10.33□□□□□ -0.76
SMG9-210ENST00000600097 PRR4Q16378 134 aa10.32□□□□□ -0.76
SMG9-210ENST00000600097 AMELXQ99217 191 aa10.32□□□□□ -0.76
SMG9-210ENST00000600097 TRBV30A0A0K0K1B3 111 aa10.31□□□□□ -0.76
SMG9-210ENST00000600097 KIAA0087Q14695 138 aa10.31□□□□□ -0.76
SMG9-210ENST00000600097 KRTAP7-1Q8IUC3 87 aa10.31□□□□□ -0.76
SMG9-210ENST00000600097 COLCA2A8K830 154 aa10.3□□□□□ -0.76
SMG9-210ENST00000600097 NDUFC2-KCTD14E9PQ53 114 aa10.3□□□□□ -0.76
SMG9-210ENST00000600097 TRGC2P03986 189 aa10.3□□□□□ -0.76
SMG9-210ENST00000600097 SEC11AP67812 179 aa10.3□□□□□ -0.76
SMG9-210ENST00000600097 LINC00242Q5T6M2 205 aa10.29□□□□□ -0.76
SMG9-210ENST00000600097 PACRGQ96M98 296 aaPredicted RBP10.29□□□□□ -0.76
SMG9-210ENST00000600097 A0A0U1RQV1 116 aa10.28□□□□□ -0.76
SMG9-210ENST00000600097 HBDP02042 147 aa10.28□□□□□ -0.76
SMG9-210ENST00000600097 LINC00173Q6ZV60 143 aa10.28□□□□□ -0.76
SMG9-210ENST00000600097 FAM19A3Q7Z5A8 133 aa10.28□□□□□ -0.76
SMG9-210ENST00000600097 CHCHD1Q96BP2 118 aaKnown RBP10.28□□□□□ -0.76
SMG9-210ENST00000600097 URB1-AS1Q96HZ7 61 aa10.28□□□□□ -0.76
SMG9-210ENST00000600097 HERVK_113P63121 156 aa10.26□□□□□ -0.77
SMG9-210ENST00000600097 C9orf129Q5T035 196 aaKnown RBP10.26□□□□□ -0.77
SMG9-210ENST00000600097 ZC2HC1BQ5TFG8 222 aa10.26□□□□□ -0.77
SMG9-210ENST00000600097 C2orf82Q6UX34 121 aa10.26□□□□□ -0.77
SMG9-210ENST00000600097 BAGE3Q86Y29 109 aa10.26□□□□□ -0.77
SMG9-210ENST00000600097 ZNF861PO60384 105 aa10.25□□□□□ -0.77
SMG9-210ENST00000600097 LINC01561Q8N1V8 128 aa10.25□□□□□ -0.77
SMG9-210ENST00000600097 GEMIN7Q9H840 131 aaKnown RBP10.25□□□□□ -0.77
SMG9-210ENST00000600097 A0A096LNJ9 63 aa10.24□□□□□ -0.77
SMG9-210ENST00000600097 SCO1O75880 301 aa10.24□□□□□ -0.77
SMG9-210ENST00000600097 ATP5LO75964 103 aa10.24□□□□□ -0.77
SMG9-210ENST00000600097 PMVKQ15126 192 aa10.24□□□□□ -0.77
SMG9-210ENST00000600097 NUPR1O60356 82 aa10.23□□□□□ -0.77
SMG9-210ENST00000600097 S100A1P23297 94 aa10.23□□□□□ -0.77
SMG9-210ENST00000600097 PMCHL1Q16048 86 aa10.23□□□□□ -0.77
SMG9-210ENST00000600097 PDZD11Q5EBL8 140 aa10.23□□□□□ -0.77
SMG9-210ENST00000600097 CST9LQ9H4G1 147 aa10.23□□□□□ -0.77
SMG9-210ENST00000600097 HSBP1O75506 76 aa10.22□□□□□ -0.77
SMG9-210ENST00000600097 TINCRA0A1B0GVN0 87 aa10.21□□□□□ -0.77
SMG9-210ENST00000600097 PRSS2P07478 247 aa10.21□□□□□ -0.77
SMG9-210ENST00000600097 NDUFA6P56556 154 aa10.21□□□□□ -0.77
SMG9-210ENST00000600097 LBHQ53QV2 105 aaPredicted RBP10.21□□□□□ -0.77
SMG9-210ENST00000600097 CKS1BP61024 79 aa10.2□□□□□ -0.78
SMG9-210ENST00000600097 MUC2Q02817 5179 aa10.2□□□□□ -0.78
SMG9-210ENST00000600097 C22orf24Q9Y442 160 aa10.2□□□□□ -0.78
SMG9-210ENST00000600097 CDKN2A-AS1Q9UH64 79 aa10.19□□□□□ -0.78
SMG9-210ENST00000600097 C6orf226Q5I0X4 101 aa10.18□□□□□ -0.78
SMG9-210ENST00000600097 LINC00469Q8N7U9 141 aa10.18□□□□□ -0.78
SMG9-210ENST00000600097 TOMM7Q9P0U1 55 aa10.18□□□□□ -0.78
SMG9-210ENST00000600097 SERF1AO75920 110 aa10.17□□□□□ -0.78
SMG9-210ENST00000600097 TSPAN13O95857 204 aa10.17□□□□□ -0.78
SMG9-210ENST00000600097 Q8IZM0 81 aa10.17□□□□□ -0.78
SMG9-210ENST00000600097 IGLV5-45A0A087WSX0 123 aa10.16□□□□□ -0.78
SMG9-210ENST00000600097 H3BRM9 83 aa10.16□□□□□ -0.78
SMG9-210ENST00000600097 RPL28P46779 137 aaKnown RBP10.16□□□□□ -0.78
SMG9-210ENST00000600097 FAM19A2Q8N3H0 131 aa10.16□□□□□ -0.78
SMG9-210ENST00000600097 IFI27L1Q96BM0 104 aa10.16□□□□□ -0.78
SMG9-210ENST00000600097 XAGE1AQ9HD64 81 aa10.16□□□□□ -0.78
SMG9-210ENST00000600097 TP73-AS1Q9UF72 201 aa10.16□□□□□ -0.78
SMG9-210ENST00000600097 ATP6V1G1O75348 118 aa10.15□□□□□ -0.78
SMG9-210ENST00000600097 IGLC3P0DOY3 106 aa10.15□□□□□ -0.78
SMG9-210ENST00000600097 CRYGAP11844 174 aa10.14□□□□□ -0.79
SMG9-210ENST00000600097 MRPL55Q7Z7F7 128 aaKnown RBP10.14□□□□□ -0.79
SMG9-210ENST00000600097 KRTAP9-2Q9BYQ4 174 aa10.14□□□□□ -0.79
SMG9-210ENST00000600097 A0A087X002 238 aa10.13□□□□□ -0.79
SMG9-210ENST00000600097 TRAV12-1A0A0B4J245 112 aa10.13□□□□□ -0.79
SMG9-210ENST00000600097 BCE1O60756 84 aa10.13□□□□□ -0.79
SMG9-210ENST00000600097 LEPROTL1O95214 131 aa10.13□□□□□ -0.79
SMG9-210ENST00000600097 TYMSOSQ8TAI1 123 aa10.13□□□□□ -0.79
SMG9-210ENST00000600097 CHTOPQ9Y3Y2 248 aaKnown RBP10.13□□□□□ -0.79
SMG9-210ENST00000600097 F8VRH5 84 aa10.12□□□□□ -0.79
SMG9-210ENST00000600097 HIST1H2BKO60814 126 aa10.12□□□□□ -0.79
SMG9-210ENST00000600097 HIST1H2BJP06899 126 aa10.12□□□□□ -0.79
SMG9-210ENST00000600097 HIST1H2BOP23527 126 aa10.12□□□□□ -0.79
SMG9-210ENST00000600097 HIST1H2BBP33778 126 aa10.12□□□□□ -0.79
SMG9-210ENST00000600097 HIST1H2BDP58876 126 aa10.12□□□□□ -0.79
SMG9-210ENST00000600097 LINC00310P59036 64 aa10.12□□□□□ -0.79
SMG9-210ENST00000600097 HIST1H2BCP62807 126 aa10.12□□□□□ -0.79
SMG9-210ENST00000600097 HIST2H2BEQ16778 126 aa10.12□□□□□ -0.79
SMG9-210ENST00000600097 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.12□□□□□ -0.79
SMG9-210ENST00000600097 HIST1H2BHQ93079 126 aa10.12□□□□□ -0.79
SMG9-210ENST00000600097 HIST1H2BNQ99877 126 aa10.12□□□□□ -0.79
SMG9-210ENST00000600097 HIST1H2BMQ99879 126 aa10.12□□□□□ -0.79
SMG9-210ENST00000600097 HSPB8Q9UJY1 196 aa10.12□□□□□ -0.79
SMG9-210ENST00000600097 SMIM1B2RUZ4 78 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms