RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 LINC00242Q5T6M2 205 aa13.29□□□□□ -0.28
IRF3-221ENST00000598808 Q8N814 137 aa13.29□□□□□ -0.28
IRF3-221ENST00000598808 CHCHD10Q8WYQ3 142 aaPredicted RBP13.29□□□□□ -0.28
IRF3-221ENST00000598808 TTTY13Q9BZ97 58 aa13.29□□□□□ -0.28
IRF3-221ENST00000598808 HERC2O95714 4834 aa13.29□□□□□ -0.28
IRF3-221ENST00000598808 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.29□□□□□ -0.28
IRF3-221ENST00000598808 XCL1P47992 114 aa13.29□□□□□ -0.28
IRF3-221ENST00000598808 TRAV13-1A0A0B4J241 112 aa13.28□□□□□ -0.28
IRF3-221ENST00000598808 LINC00959A0A1B0GUT2 108 aa13.28□□□□□ -0.28
IRF3-221ENST00000598808 A6NDN8 102 aa13.28□□□□□ -0.28
IRF3-221ENST00000598808 ORAOV1Q8WV07 137 aa13.28□□□□□ -0.28
IRF3-221ENST00000598808 USP17L23D6RBM5 183 aa13.27□□□□□ -0.29
IRF3-221ENST00000598808 SCGB1D4Q6XE38 83 aa13.27□□□□□ -0.29
IRF3-221ENST00000598808 IGLV5-52A0A0A0MRZ9 124 aa13.26□□□□□ -0.29
IRF3-221ENST00000598808 C14orf177Q52M58 125 aa13.25□□□□□ -0.29
IRF3-221ENST00000598808 KRTAP26-1Q6PEX3 210 aa13.25□□□□□ -0.29
IRF3-221ENST00000598808 PGPEP1Q9NXJ5 209 aa13.25□□□□□ -0.29
IRF3-221ENST00000598808 CDKN2A-AS1Q9UH64 79 aa13.25□□□□□ -0.29
IRF3-221ENST00000598808 SPANXB1Q9NS25 103 aaPredicted RBP13.24□□□□□ -0.29
IRF3-221ENST00000598808 IGLV5-39A0A0G2JS06 123 aa13.23□□□□□ -0.29
IRF3-221ENST00000598808 TSPEAR-AS2P59090 65 aa13.23□□□□□ -0.29
IRF3-221ENST00000598808 CEND1Q8N111 149 aa13.23□□□□□ -0.29
IRF3-221ENST00000598808 NTN5Q8WTR8 489 aaPredicted RBP13.23□□□□□ -0.29
IRF3-221ENST00000598808 HIST1H4GQ99525 98 aa13.23□□□□□ -0.29
IRF3-221ENST00000598808 KIAA1109Q2LD37 5005 aa13.22□□□□□ -0.29
IRF3-221ENST00000598808 COX6A2Q02221 97 aa13.21□□□□□ -0.3
IRF3-221ENST00000598808 SPINK8P0C7L1 97 aa13.2□□□□□ -0.3
IRF3-221ENST00000598808 FOXI1Q12951 378 aa13.2□□□□□ -0.3
IRF3-221ENST00000598808 LINC01561Q8N1V8 128 aa13.2□□□□□ -0.3
IRF3-221ENST00000598808 A0A1B0GV90 55 aa13.19□□□□□ -0.3
IRF3-221ENST00000598808 TMEM238C9JI98 176 aa13.19□□□□□ -0.3
IRF3-221ENST00000598808 GCSHP23434 173 aa13.19□□□□□ -0.3
IRF3-221ENST00000598808 CD164L2Q6UWJ8 174 aa13.19□□□□□ -0.3
IRF3-221ENST00000598808 NDUFA12Q9UI09 145 aa13.19□□□□□ -0.3
IRF3-221ENST00000598808 TMEM238LA0A1B0GVL6 79 aa13.18□□□□□ -0.3
IRF3-221ENST00000598808 A6NJY4 79 aa13.18□□□□□ -0.3
IRF3-221ENST00000598808 SMIM1B2RUZ4 78 aa13.18□□□□□ -0.3
IRF3-221ENST00000598808 MALP21145 153 aa13.18□□□□□ -0.3
IRF3-221ENST00000598808 CFAP161Q6P656 301 aa13.18□□□□□ -0.3
IRF3-221ENST00000598808 LRP1BQ9NZR2 4599 aa13.17□□□□□ -0.3
IRF3-221ENST00000598808 IGHV3-64A0A075B6Q5 118 aa13.17□□□□□ -0.3
IRF3-221ENST00000598808 NDUFA1O15239 70 aa13.17□□□□□ -0.3
IRF3-221ENST00000598808 SRSF9Q13242 221 aaKnown RBP eCLIP13.17□□□□□ -0.3
IRF3-221ENST00000598808 HIGD2BQ4VC39 106 aa13.17□□□□□ -0.3
IRF3-221ENST00000598808 Q6ZVH6 145 aa13.17□□□□□ -0.3
IRF3-221ENST00000598808 IGHV3OR16-9A0A0B4J2B5 98 aa13.16□□□□□ -0.3
IRF3-221ENST00000598808 TIMM17BO60830 172 aa13.16□□□□□ -0.3
IRF3-221ENST00000598808 PTTG1IPP53801 180 aa13.16□□□□□ -0.3
IRF3-221ENST00000598808 A0A087WZ39 114 aa13.16□□□□□ -0.3
IRF3-221ENST00000598808 COX7A2LO14548 114 aa13.16□□□□□ -0.3
IRF3-221ENST00000598808 SFTA2Q6UW10 78 aa13.16□□□□□ -0.3
IRF3-221ENST00000598808 DNAH5Q8TE73 4624 aa13.15□□□□□ -0.3
IRF3-221ENST00000598808 A0A0J9YXY3 114 aa13.15□□□□□ -0.3
IRF3-221ENST00000598808 C5orf38Q86SI9 138 aa13.15□□□□□ -0.3
IRF3-221ENST00000598808 C15orf56Q8N910 161 aa13.15□□□□□ -0.3
IRF3-221ENST00000598808 SMIM13P0DJ93 91 aa13.14□□□□□ -0.31
IRF3-221ENST00000598808 HERV-K104P63124 156 aa13.14□□□□□ -0.31
IRF3-221ENST00000598808 TAX1BP3O14907 124 aa13.13□□□□□ -0.31
IRF3-221ENST00000598808 FXYD2P54710 66 aa13.13□□□□□ -0.31
IRF3-221ENST00000598808 LINC01620Q4KN68 170 aa13.13□□□□□ -0.31
IRF3-221ENST00000598808 A0A1B0GWB2 263 aa13.11□□□□□ -0.31
IRF3-221ENST00000598808 CIRBPQ14011 172 aaKnown RBP13.11□□□□□ -0.31
IRF3-221ENST00000598808 RYR1P21817 5038 aa13.1□□□□□ -0.31
IRF3-221ENST00000598808 KRTAP10-1P60331 282 aa13.1□□□□□ -0.31
IRF3-221ENST00000598808 SPANXDQ9BXN6 97 aa13.1□□□□□ -0.31
IRF3-221ENST00000598808 SPANXCQ9NY87 97 aa13.1□□□□□ -0.31
IRF3-221ENST00000598808 APOMO95445 188 aa13.1□□□□□ -0.31
IRF3-221ENST00000598808 COPS9Q8WXC6 57 aa13.1□□□□□ -0.31
IRF3-221ENST00000598808 HSPG2P98160 4391 aa13.09□□□□□ -0.31
IRF3-221ENST00000598808 ZNF561-AS1K7EIQ3 104 aa13.09□□□□□ -0.31
IRF3-221ENST00000598808 RPL24P83731 157 aaKnown RBP13.09□□□□□ -0.31
IRF3-221ENST00000598808 COX7B2Q8TF08 81 aa13.09□□□□□ -0.31
IRF3-221ENST00000598808 LINC00526Q96FQ7 95 aa13.09□□□□□ -0.31
IRF3-221ENST00000598808 GVQW2A0A096LPI5 108 aaPredicted RBP13.08□□□□□ -0.32
IRF3-221ENST00000598808 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.08□□□□□ -0.32
IRF3-221ENST00000598808 IFITM1P13164 125 aa13.08□□□□□ -0.32
IRF3-221ENST00000598808 ZNF625Q96I27 306 aaPredicted RBP13.08□□□□□ -0.32
IRF3-221ENST00000598808 C9orf118A6NHY6 69 aa13.07□□□□□ -0.32
IRF3-221ENST00000598808 LITAFQ99732 161 aa13.07□□□□□ -0.32
IRF3-221ENST00000598808 PPDPFQ9H3Y8 114 aa13.07□□□□□ -0.32
IRF3-221ENST00000598808 NHP2Q9NX24 153 aaKnown RBP13.07□□□□□ -0.32
IRF3-221ENST00000598808 APOBP04114 4563 aaKnown RBP13.07□□□□□ -0.32
IRF3-221ENST00000598808 SPAG11BQ08648 103 aa13.04□□□□□ -0.32
IRF3-221ENST00000598808 CNBPP62633 177 aaKnown RBP13.04□□□□□ -0.32
IRF3-221ENST00000598808 Q8IZM0 81 aa13.04□□□□□ -0.32
IRF3-221ENST00000598808 SLPIP03973 132 aa13.02□□□□□ -0.33
IRF3-221ENST00000598808 CXCL5P42830 114 aa13.02□□□□□ -0.33
IRF3-221ENST00000598808 HAMPP81172 84 aa13.02□□□□□ -0.33
IRF3-221ENST00000598808 PRSS2P07478 247 aa13.01□□□□□ -0.33
IRF3-221ENST00000598808 C9orf163Q8N9P6 203 aa13.01□□□□□ -0.33
IRF3-221ENST00000598808 CARD19Q96LW7 228 aa13.01□□□□□ -0.33
IRF3-221ENST00000598808 CAMK2N2Q96S95 79 aa13.01□□□□□ -0.33
IRF3-221ENST00000598808 CDK2AP2O75956 126 aa13□□□□□ -0.33
IRF3-221ENST00000598808 MUSTN1Q8IVN3 82 aa13□□□□□ -0.33
IRF3-221ENST00000598808 A0A0B4J2C4 111 aa12.99□□□□□ -0.33
IRF3-221ENST00000598808 SYCNQ0VAF6 134 aa12.99□□□□□ -0.33
IRF3-221ENST00000598808 VAMP3Q15836 100 aa12.99□□□□□ -0.33
IRF3-221ENST00000598808 TOMM7Q9P0U1 55 aa12.99□□□□□ -0.33
IRF3-221ENST00000598808 C6orf226Q5I0X4 101 aa12.98□□□□□ -0.33
IRF3-221ENST00000598808 MEIG1Q5JSS6 88 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms