RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 CCL18P55774 89 aa8.77□□□□□ -1.01
USHBP1-207ENST00000597928 SMIM11BQ8TCY0 68 aa8.77□□□□□ -1.01
USHBP1-207ENST00000597928 FAM218AQ96MZ4 157 aa8.77□□□□□ -1.01
USHBP1-207ENST00000597928 BEAN1Q3B7T3 259 aa8.76□□□□□ -1.01
USHBP1-207ENST00000597928 A0A087WYN8 130 aa8.76□□□□□ -1.01
USHBP1-207ENST00000597928 TRAV25A0A0B4J276 109 aa8.75□□□□□ -1.01
USHBP1-207ENST00000597928 H3BT86 120 aa8.75□□□□□ -1.01
USHBP1-207ENST00000597928 HIGD2BQ4VC39 106 aa8.75□□□□□ -1.01
USHBP1-207ENST00000597928 LINC00337Q8N6G1 96 aa8.75□□□□□ -1.01
USHBP1-207ENST00000597928 TENM4Q6N022 2769 aa8.75□□□□□ -1.01
USHBP1-207ENST00000597928 BAHCC1Q9P281 2608 aa8.75□□□□□ -1.01
USHBP1-207ENST00000597928 FHL2Q14192 279 aa8.74□□□□□ -1.01
USHBP1-207ENST00000597928 SPATA3Q8NHX4 192 aa8.74□□□□□ -1.01
USHBP1-207ENST00000597928 HERV-K104P63124 156 aa8.74□□□□□ -1.01
USHBP1-207ENST00000597928 WFDC9Q8NEX5 89 aa8.74□□□□□ -1.01
USHBP1-207ENST00000597928 LINC00959A0A1B0GUT2 108 aa8.74□□□□□ -1.01
USHBP1-207ENST00000597928 PRB2P02812 416 aaPredicted RBP8.73□□□□□ -1.01
USHBP1-207ENST00000597928 TENM1Q9UKZ4 2725 aa8.73□□□□□ -1.01
USHBP1-207ENST00000597928 C6orf223Q8N319 242 aa8.73□□□□□ -1.01
USHBP1-207ENST00000597928 RPL18AQ02543 176 aaKnown RBP8.72□□□□□ -1.01
USHBP1-207ENST00000597928 MRAPQ8TCY5 172 aa8.72□□□□□ -1.01
USHBP1-207ENST00000597928 PRO0255Q9UI72 69 aa8.72□□□□□ -1.01
USHBP1-207ENST00000597928 LY6G6DO95868 133 aa8.72□□□□□ -1.01
USHBP1-207ENST00000597928 CMC4P56277 68 aaPredicted RBP8.72□□□□□ -1.01
USHBP1-207ENST00000597928 C9orf153Q5TBE3 101 aa8.72□□□□□ -1.01
USHBP1-207ENST00000597928 IGLV1-51P01701 117 aa8.72□□□□□ -1.01
USHBP1-207ENST00000597928 CHCHD10Q8WYQ3 142 aaPredicted RBP8.72□□□□□ -1.01
USHBP1-207ENST00000597928 TRBV6-4A0A1B0GX49 114 aa8.71□□□□□ -1.01
USHBP1-207ENST00000597928 FSHBP01225 129 aa8.71□□□□□ -1.01
USHBP1-207ENST00000597928 RETNQ9HD89 108 aa8.71□□□□□ -1.01
USHBP1-207ENST00000597928 GIG44P09565 113 aaPredicted RBP8.71□□□□□ -1.02
USHBP1-207ENST00000597928 A0A087WVE0 104 aa8.71□□□□□ -1.02
USHBP1-207ENST00000597928 HAMPP81172 84 aa8.71□□□□□ -1.02
USHBP1-207ENST00000597928 REG3AQ06141 175 aa8.7□□□□□ -1.02
USHBP1-207ENST00000597928 OXLD1Q5BKU9 147 aa8.69□□□□□ -1.02
USHBP1-207ENST00000597928 NSD1Q96L73 2696 aaPredicted RBP8.69□□□□□ -1.02
USHBP1-207ENST00000597928 IGHV4-28A0A0C4DH34 117 aa8.69□□□□□ -1.02
USHBP1-207ENST00000597928 MRPL23Q16540 153 aaKnown RBP8.69□□□□□ -1.02
USHBP1-207ENST00000597928 LRRC75A-AS1Q8N1F1 130 aa8.69□□□□□ -1.02
USHBP1-207ENST00000597928 SPAG11BQ08648 103 aa8.68□□□□□ -1.02
USHBP1-207ENST00000597928 UNQ6190/PRO20217Q6UXQ8 127 aa8.68□□□□□ -1.02
USHBP1-207ENST00000597928 C6orf99Q4VX62 202 aa8.68□□□□□ -1.02
USHBP1-207ENST00000597928 DEFB105AQ8NG35 78 aa8.68□□□□□ -1.02
USHBP1-207ENST00000597928 ZNF469Q96JG9 3925 aaPredicted RBP8.68□□□□□ -1.02
USHBP1-207ENST00000597928 INAFM2P0DMQ5 153 aa8.68□□□□□ -1.02
USHBP1-207ENST00000597928 FBN1P35555 2871 aaKnown RBP8.68□□□□□ -1.02
USHBP1-207ENST00000597928 IGLV5-39A0A0G2JS06 123 aa8.67□□□□□ -1.02
USHBP1-207ENST00000597928 DEFB121Q5J5C9 76 aa8.67□□□□□ -1.02
USHBP1-207ENST00000597928 ZNF561-AS1K7EIQ3 104 aa8.66□□□□□ -1.02
USHBP1-207ENST00000597928 ORMDL1Q9P0S3 153 aa8.66□□□□□ -1.02
USHBP1-207ENST00000597928 CELA1Q9UNI1 258 aa8.66□□□□□ -1.02
USHBP1-207ENST00000597928 SCXQ7RTU7 201 aa8.66□□□□□ -1.02
USHBP1-207ENST00000597928 KRTAP1-3Q8IUG1 177 aa8.66□□□□□ -1.02
USHBP1-207ENST00000597928 TIMM17BO60830 172 aa8.66□□□□□ -1.02
USHBP1-207ENST00000597928 C9orf129Q5T035 196 aaKnown RBP8.66□□□□□ -1.02
USHBP1-207ENST00000597928 SHISA2Q6UWI4 295 aa8.66□□□□□ -1.02
USHBP1-207ENST00000597928 IGKV2D-24A0A075B6R9 120 aa8.65□□□□□ -1.02
USHBP1-207ENST00000597928 NHLRC4P0CG21 123 aaPredicted RBP8.65□□□□□ -1.02
USHBP1-207ENST00000597928 CXCL5P42830 114 aa8.65□□□□□ -1.02
USHBP1-207ENST00000597928 OTOGQ6ZRI0 2925 aa8.65□□□□□ -1.02
USHBP1-207ENST00000597928 IGHV3OR16-9A0A0B4J2B5 98 aa8.65□□□□□ -1.02
USHBP1-207ENST00000597928 HILS1P60008 231 aa8.65□□□□□ -1.02
USHBP1-207ENST00000597928 KLK5Q9Y337 293 aaPredicted RBP8.65□□□□□ -1.02
USHBP1-207ENST00000597928 SBSPONQ8IVN8 264 aa8.65□□□□□ -1.03
USHBP1-207ENST00000597928 IGKV2-28A0A075B6P5 120 aa8.64□□□□□ -1.03
USHBP1-207ENST00000597928 IGKV2D-28P01615 120 aa8.64□□□□□ -1.03
USHBP1-207ENST00000597928 A0A1B0GX51 115 aa8.64□□□□□ -1.03
USHBP1-207ENST00000597928 TRAV23DV6A0A075B6W5 121 aa8.63□□□□□ -1.03
USHBP1-207ENST00000597928 PLAC8L1A1L4L8 177 aa8.63□□□□□ -1.03
USHBP1-207ENST00000597928 APOC4P55056 127 aa8.63□□□□□ -1.03
USHBP1-207ENST00000597928 SPART-AS1P0CW21 52 aa8.63□□□□□ -1.03
USHBP1-207ENST00000597928 IBA57-AS1B1ANH7 110 aa8.62□□□□□ -1.03
USHBP1-207ENST00000597928 A0A087WZ39 114 aa8.62□□□□□ -1.03
USHBP1-207ENST00000597928 KRTAP10-3P60369 221 aa8.62□□□□□ -1.03
USHBP1-207ENST00000597928 C10orf25Q5T742 122 aa8.62□□□□□ -1.03
USHBP1-207ENST00000597928 C9orf66Q5T8R8 295 aa8.62□□□□□ -1.03
USHBP1-207ENST00000597928 CAMK2N2Q96S95 79 aa8.62□□□□□ -1.03
USHBP1-207ENST00000597928 IGLV5-45A0A087WSX0 123 aa8.61□□□□□ -1.03
USHBP1-207ENST00000597928 H0YGX0 51 aa8.61□□□□□ -1.03
USHBP1-207ENST00000597928 TRACP01848 142 aa8.61□□□□□ -1.03
USHBP1-207ENST00000597928 SMCR5Q8TEV8 140 aa8.61□□□□□ -1.03
USHBP1-207ENST00000597928 CSDC2Q9Y534 153 aaKnown RBP8.6□□□□□ -1.03
USHBP1-207ENST00000597928 CYSRT1A8MQ03 144 aa8.6□□□□□ -1.03
USHBP1-207ENST00000597928 LINC00643Q86TS7 51 aa8.59□□□□□ -1.03
USHBP1-207ENST00000597928 LINC00846Q9NV44 126 aa8.59□□□□□ -1.03
USHBP1-207ENST00000597928 C19orf73Q9NVV2 129 aa8.59□□□□□ -1.03
USHBP1-207ENST00000597928 PKD1L1Q8TDX9 2849 aa8.59□□□□□ -1.03
USHBP1-207ENST00000597928 hADV29S1A0JD25 119 aa8.58□□□□□ -1.04
USHBP1-207ENST00000597928 IGHV4-30-4P0DP06 118 aa8.58□□□□□ -1.04
USHBP1-207ENST00000597928 CSNK1G2-AS1Q8NCQ2 148 aa8.58□□□□□ -1.04
USHBP1-207ENST00000597928 ENHOQ6UWT2 76 aa8.58□□□□□ -1.04
USHBP1-207ENST00000597928 TMEM126AQ9H061 195 aa8.58□□□□□ -1.04
USHBP1-207ENST00000597928 X6R8D5 127 aa8.57□□□□□ -1.04
USHBP1-207ENST00000597928 RPL28P46779 137 aaKnown RBP8.57□□□□□ -1.04
USHBP1-207ENST00000597928 Q6ZQY7 126 aa8.57□□□□□ -1.04
USHBP1-207ENST00000597928 OVOL2Q9BRP0 275 aa8.56□□□□□ -1.04
USHBP1-207ENST00000597928 CD164L2Q6UWJ8 174 aa8.56□□□□□ -1.04
USHBP1-207ENST00000597928 DPH3Q96FX2 82 aa8.56□□□□□ -1.04
USHBP1-207ENST00000597928 ACYP1P07311 99 aa8.55□□□□□ -1.04
USHBP1-207ENST00000597928 UBL5Q9BZL1 73 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms