RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 KRTAP11-1Q8IUC1 163 aa14.35□□□□□ -0.11
LSM4-204ENST00000594828 KRTAP7-1Q8IUC3 87 aa14.35□□□□□ -0.11
LSM4-204ENST00000594828 SCGB3A1Q96QR1 104 aa14.35□□□□□ -0.11
LSM4-204ENST00000594828 ALKBH7Q9BT30 221 aaPredicted RBP14.35□□□□□ -0.11
LSM4-204ENST00000594828 C9orf129Q5T035 196 aaKnown RBP14.34□□□□□ -0.11
LSM4-204ENST00000594828 M0QXV9 152 aa14.33□□□□□ -0.12
LSM4-204ENST00000594828 UBR4Q5T4S7 5183 aa14.32□□□□□ -0.12
LSM4-204ENST00000594828 COMMD7Q86VX2 200 aa14.32□□□□□ -0.12
LSM4-204ENST00000594828 UBE2BP63146 152 aa14.31□□□□□ -0.12
LSM4-204ENST00000594828 COX19Q49B96 90 aa14.31□□□□□ -0.12
LSM4-204ENST00000594828 DIRC1Q969H9 104 aa14.31□□□□□ -0.12
LSM4-204ENST00000594828 LINC01546A6NGU7 62 aa14.3□□□□□ -0.12
LSM4-204ENST00000594828 LINC01549A6NIU2 74 aa14.3□□□□□ -0.12
LSM4-204ENST00000594828 LINC00469Q8N7U9 141 aa14.29□□□□□ -0.12
LSM4-204ENST00000594828 TINCRA0A1B0GVN0 87 aa14.27□□□□□ -0.13
LSM4-204ENST00000594828 F8VRH5 84 aa14.27□□□□□ -0.13
LSM4-204ENST00000594828 FABP9Q0Z7S8 132 aa14.27□□□□□ -0.13
LSM4-204ENST00000594828 C10orf91Q5T1B1 145 aa14.27□□□□□ -0.13
LSM4-204ENST00000594828 MRPL18Q9H0U6 180 aaKnown RBP14.27□□□□□ -0.13
LSM4-204ENST00000594828 RPS10P5Q9NQ39 176 aa14.27□□□□□ -0.13
LSM4-204ENST00000594828 FA2HQ7L5A8 372 aa14.26□□□□□ -0.13
LSM4-204ENST00000594828 SMCO4Q9NRQ5 59 aa14.26□□□□□ -0.13
LSM4-204ENST00000594828 H0Y9J4 135 aa14.25□□□□□ -0.13
LSM4-204ENST00000594828 CXCL5P42830 114 aa14.25□□□□□ -0.13
LSM4-204ENST00000594828 RHEBQ15382 184 aa14.25□□□□□ -0.13
LSM4-204ENST00000594828 CST9LQ9H4G1 147 aa14.25□□□□□ -0.13
LSM4-204ENST00000594828 XAGE1AQ9HD64 81 aa14.25□□□□□ -0.13
LSM4-204ENST00000594828 SMIM1B2RUZ4 78 aa14.24□□□□□ -0.13
LSM4-204ENST00000594828 PDZD11Q5EBL8 140 aa14.24□□□□□ -0.13
LSM4-204ENST00000594828 CARHSP1Q9Y2V2 147 aaKnown RBP14.24□□□□□ -0.13
LSM4-204ENST00000594828 IGLV5-45A0A087WSX0 123 aa14.22□□□□□ -0.13
LSM4-204ENST00000594828 PMVKQ15126 192 aa14.22□□□□□ -0.13
LSM4-204ENST00000594828 COX7B2Q8TF08 81 aa14.22□□□□□ -0.13
LSM4-204ENST00000594828 C22orf24Q9Y442 160 aa14.22□□□□□ -0.13
LSM4-204ENST00000594828 PRR26Q8N8Z3 221 aa14.2□□□□□ -0.14
LSM4-204ENST00000594828 LBHQ53QV2 105 aaPredicted RBP14.19□□□□□ -0.14
LSM4-204ENST00000594828 SPINK8P0C7L1 97 aa14.18□□□□□ -0.14
LSM4-204ENST00000594828 TRAPPC1Q9Y5R8 145 aa14.16□□□□□ -0.14
LSM4-204ENST00000594828 H3BRM9 83 aa14.15□□□□□ -0.14
LSM4-204ENST00000594828 NUPR1O60356 82 aa14.14□□□□□ -0.15
LSM4-204ENST00000594828 TP73-AS1Q9UF72 201 aa14.14□□□□□ -0.15
LSM4-204ENST00000594828 IGLV1-50A0A075B6I6 118 aa14.13□□□□□ -0.15
LSM4-204ENST00000594828 ZNF861PO60384 105 aa14.13□□□□□ -0.15
LSM4-204ENST00000594828 KRTAP1-4P0C5Y4 121 aa14.13□□□□□ -0.15
LSM4-204ENST00000594828 LINC00614P0C842 121 aa14.13□□□□□ -0.15
LSM4-204ENST00000594828 NDUFA6P56556 154 aa14.13□□□□□ -0.15
LSM4-204ENST00000594828 RAB5BP61020 215 aa14.13□□□□□ -0.15
LSM4-204ENST00000594828 MRPL55Q7Z7F7 128 aaKnown RBP14.13□□□□□ -0.15
LSM4-204ENST00000594828 C18orf32Q8TCD1 76 aa14.13□□□□□ -0.15
LSM4-204ENST00000594828 URB1-AS1Q96HZ7 61 aa14.12□□□□□ -0.15
LSM4-204ENST00000594828 LRP2P98164 4655 aa14.11□□□□□ -0.15
LSM4-204ENST00000594828 A0A096LNJ9 63 aa14.11□□□□□ -0.15
LSM4-204ENST00000594828 APOC3P02656 99 aa14.11□□□□□ -0.15
LSM4-204ENST00000594828 IGLC3P0DOY3 106 aa14.11□□□□□ -0.15
LSM4-204ENST00000594828 ATP5LO75964 103 aa14.09□□□□□ -0.15
LSM4-204ENST00000594828 HBDP02042 147 aa14.09□□□□□ -0.15
LSM4-204ENST00000594828 LINC00167Q96N53 147 aa14.08□□□□□ -0.16
LSM4-204ENST00000594828 SNAPINO95295 136 aa14.07□□□□□ -0.16
LSM4-204ENST00000594828 PMCHL1Q16048 86 aa14.07□□□□□ -0.16
LSM4-204ENST00000594828 IGLV5-39A0A0G2JS06 123 aa14.06□□□□□ -0.16
LSM4-204ENST00000594828 RPL37AP8A6NKH3 93 aa14.06□□□□□ -0.16
LSM4-204ENST00000594828 NDUFA5Q16718 116 aa14.06□□□□□ -0.16
LSM4-204ENST00000594828 SVBPQ8N300 66 aa14.06□□□□□ -0.16
LSM4-204ENST00000594828 BCE1O60756 84 aa14.05□□□□□ -0.16
LSM4-204ENST00000594828 ZNF22P17026 224 aaPredicted RBP14.05□□□□□ -0.16
LSM4-204ENST00000594828 RPL13AP40429 203 aaKnown RBP14.05□□□□□ -0.16
LSM4-204ENST00000594828 IGLV5-37A0A075B6J1 123 aa14.03□□□□□ -0.16
LSM4-204ENST00000594828 GAGE10A6NGK3 116 aa14.03□□□□□ -0.16
LSM4-204ENST00000594828 PFN2P35080 140 aa14.03□□□□□ -0.16
LSM4-204ENST00000594828 RPL28P46779 137 aaKnown RBP14.03□□□□□ -0.16
LSM4-204ENST00000594828 BAGE3Q86Y29 109 aa14.02□□□□□ -0.17
LSM4-204ENST00000594828 NKAPP1Q8N9T2 125 aa14.02□□□□□ -0.17
LSM4-204ENST00000594828 C11orf86A6NJI1 115 aa13.99□□□□□ -0.17
LSM4-204ENST00000594828 TMEM170BQ5T4T1 132 aa13.99□□□□□ -0.17
LSM4-204ENST00000594828 ERG28Q9UKR5 140 aa13.98□□□□□ -0.17
LSM4-204ENST00000594828 COX17Q14061 63 aa13.96□□□□□ -0.17
LSM4-204ENST00000594828 ZNF625Q96I27 306 aaPredicted RBP13.96□□□□□ -0.17
LSM4-204ENST00000594828 SND1-IT1Q9HBX3 110 aa13.96□□□□□ -0.17
LSM4-204ENST00000594828 CHTOPQ9Y3Y2 248 aaKnown RBP13.95□□□□□ -0.18
LSM4-204ENST00000594828 SCO1O75880 301 aa13.94□□□□□ -0.18
LSM4-204ENST00000594828 SFTA2Q6UW10 78 aa13.94□□□□□ -0.18
LSM4-204ENST00000594828 YPEL4Q96NS1 127 aa13.94□□□□□ -0.18
LSM4-204ENST00000594828 IGKV2-28A0A075B6P5 120 aa13.93□□□□□ -0.18
LSM4-204ENST00000594828 IGKV2D-28P01615 120 aa13.93□□□□□ -0.18
LSM4-204ENST00000594828 UBE2AP49459 152 aa13.93□□□□□ -0.18
LSM4-204ENST00000594828 CHCHD1Q96BP2 118 aaKnown RBP13.93□□□□□ -0.18
LSM4-204ENST00000594828 RPL24P83731 157 aaKnown RBP13.92□□□□□ -0.18
LSM4-204ENST00000594828 VPREB1P12018 145 aa13.91□□□□□ -0.18
LSM4-204ENST00000594828 RNF213Q63HN8 5207 aa13.9□□□□□ -0.18
LSM4-204ENST00000594828 KRTAP13-1Q8IUC0 172 aa13.9□□□□□ -0.18
LSM4-204ENST00000594828 IFI27L1Q96BM0 104 aa13.9□□□□□ -0.18
LSM4-204ENST00000594828 A0A087X002 238 aa13.89□□□□□ -0.19
LSM4-204ENST00000594828 TRAV12-1A0A0B4J245 112 aa13.89□□□□□ -0.19
LSM4-204ENST00000594828 CRYGAP11844 174 aa13.89□□□□□ -0.19
LSM4-204ENST00000594828 TMEM223A0PJW6 202 aa13.87□□□□□ -0.19
LSM4-204ENST00000594828 LPAP08519 4548 aa13.86□□□□□ -0.19
LSM4-204ENST00000594828 LINC00158P58513 81 aa13.86□□□□□ -0.19
LSM4-204ENST00000594828 PRR4Q16378 134 aa13.86□□□□□ -0.19
LSM4-204ENST00000594828 TYMSOSQ8TAI1 123 aa13.86□□□□□ -0.19
LSM4-204ENST00000594828 TMEM126AQ9H061 195 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms